Contig 005639:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF012L06Sequence545013459 (15)ref|XP_009758780.1|2e-48PREDICTED: transcription factor GTE7-like [Nicotiana sylvestris]747005639 (2)ref|XP_004242873.1|1e-105PREDICTED: ADP-ribosylation factor-like protein 2 [Solanum lycopersicum] ref|XP_
JMSF040B23Sequence605013459 (15)ref|XP_009758780.1|7e-48PREDICTED: transcription factor GTE7-like [Nicotiana sylvestris]814005639 (2)ref|XP_004242873.1|1e-101PREDICTED: ADP-ribosylation factor-like protein 2 [Solanum lycopersicum] ref|XP_

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF040B23+ AGCCACAACATCATCTTTTAGTAACTAGGAGGTCAAGAGAA
                      ____________________________________________________________
consensus AGCCACAACATCATCTTTTAGTAACTAGGAGGTCAAGAGAA
 
. : . : . : . : . : . :
rJMSF040B23+ TGGGACTTCTTAGCATCATCCGAAAGATCAAGAAGAAAGAAAAAGAAATGCGCATTCTTA
rJMSF012L06+ AGAAAGAAAAAGAAATGCGCATTCTTA
                      ____________________________________________________________
consensus TGGGACTTCTTAGCATCATCCGAAAGATCAAGAAGAAAGAAAAAGAAATGCGCATTCTTA
 
. : . : . : . : . : . :
rJMSF040B23+ TGGTGGGACTTGACAACTCAGGCAAGACAACCATAGTTTTGAAAATAAATGGTGAAGACA
rJMSF012L06+ TGGTGGGACTTGACAACTCAGGCAAGACAACCATAGTTTTGAAAATAAATGGTGAAGACA
                      ____________________________________________________________
consensus TGGTGGGACTTGACAACTCAGGCAAGACAACCATAGTTTTGAAAATAAATGGTGAAGACA
 
. : . : . : . : . : . :
rJMSF040B23+ CCAGTGTTATCAGTCCGACACTCGGCTTCAACATCAAAACCATTGCATATCAGAAATATA
rJMSF012L06+ CCAGTGTTATCAGTCCGACACTCGGCTTCAACATCAAAACCATTGCATATCAGAAATATA
                      ____________________________________________________________
consensus CCAGTGTTATCAGTCCGACACTCGGCTTCAACATCAAAACCATTGCATATCAGAAATATA
 
. : . : . : . : . : . :
rJMSF040B23+ CACTAAATATATGGGATGTTGGGGGCCAAAAAACCATAAGGTCCTACTGGAGGAACTACT
rJMSF012L06+ CACTAAATATATGGGATGTTGGGGGCCAAAAAACCATAAGGTCCTACTGGAGGAACTACT
                      ____________________________________________________________
consensus CACTAAATATATGGGATGTTGGGGGCCAAAAAACCATAAGGTCCTACTGGAGGAACTACT
 
. : . : . : . : . : . :
rJMSF040B23+ TTGAACAAACTGACGGTTTGGTGTGGGTTGTGGATAGTTCTGATCTTAGAAGGCTAGATG
rJMSF012L06+ TTGAACAAACTGACGGTTTGGTGTGGGTTGTGGATAGTTCTGATCTTAGAAGGCTAGATG
                      ____________________________________________________________
consensus TTGAACAAACTGACGGTTTGGTGTGGGTTGTGGATAGTTCTGATCTTAGAAGGCTAGATG
 
. : . : . : . : . : . :
rJMSF040B23+ ACTGCAGATATGAATTGCATAATCTTTTGAAAGAAGAGAGGCTATCTGGAGCATCATTAC
rJMSF012L06+ ACTGCAGATATGAATTGCATAATCTTTTGAAAGAAGAGAGGCTATCTGGAGCATCATTAC
                      ____________________________________________________________
consensus ACTGCAGATATGAATTGCATAATCTTTTGAAAGAAGAGAGGCTATCTGGAGCATCATTAC
 
. : . : . : . : . : . :
rJMSF040B23+ TGATTTTTGCAAATAAGCAAGACATACAAGGTTCTCTTTGTCCCGACGAAATAGCTAAGG
rJMSF012L06+ TGATTTTTGCAAATAAGCAAGACATACAAGGTTCTCTTTGTCCCGACGAAATAGCTAAGG
                      ____________________________________________________________
consensus TGATTTTTGCAAATAAGCAAGACATACAAGGTTCTCTTTGTCCCGACGAAATAGCTAAGG
 
. : . : . : . : . : . :
rJMSF040B23+ TGCTTAATCTGGATGCTATGGATAAAACCCGGCACTGGAAAATTGTGGGATGTAGTGCAT
rJMSF012L06+ TGCTTAATCTGGATGCTATGGATAAAACCCGGCACTGGAAAATTGTGGGATGTAGTGCAT
                      ____________________________________________________________
consensus TGCTTAATCTGGATGCTATGGATAAAACCCGGCACTGGAAAATTGTGGGATGTAGTGCAT
 
. : . : . : . : . : . :
rJMSF040B23+ ATACCGGAGAAGGGCTCCTCGAGGGATTTGATTGGTTAGTACAGGACGTTGCCTCTCGGA
rJMSF012L06+ ATACCGGAGAAGGGCTCCTCGAGGGATTTGATTGGTTAGTACAGGACGTTGCCTCTCGGA
                      ____________________________________________________________
consensus ATACCGGAGAAGGGCTCCTCGAGGGATTTGATTGGTTAGTACAGGACGTTGCCTCTCGGA
 
. : . : . : . : . : . :
rJMSF040B23+ TCTATATGCTTGATTAAAATGAATCTTTCATATTAGGCAATTTGTCATCATACTGTGTGA
rJMSF012L06+ TCTATATGCTTGATTAAAATGAATCTTTCATATTAGGCAATTTGTCATCATACTGTGTGA
                      ____________________________________________________________
consensus TCTATATGCTTGATTAAAATGAATCTTTCATATTAGGCAATTTGTCATCATACTGTGTGA
 
. : . : . : . : . : . :
rJMSF040B23+ TTTTAGAGTATAGTTTTCTCACATCCAGTGGCTTGTTTGTTATAATTTGCTTAGTGCCTT
rJMSF012L06+ TTTTAGAGTATAGTTTTCTCACATCCAGTGGCTTGTTTGTTATAATTTGCTTAGTGCCTT
                      ____________________________________________________________
consensus TTTTAGAGTATAGTTTTCTCACATCCAGTGGCTTGTTTGTTATAATTTGCTTAGTGCCTT
 
. : . : . : . : . : . :
rJMSF040B23+ TTTTCTTCTGCTCTTTAATCTTGTGTACACCATGCATAATTGAAACTGAGGCAACTGCAT
rJMSF012L06+ TTTTCTTCTGCTCTTTAATCTTGTGTACACCATGCATAATTGAAACTGAGGCAACTGCAT
                      ____________________________________________________________
consensus TTTTCTTCTGCTCTTTAATCTTGTGTACACCATGCATAATTGAAACTGAGGCAACTGCAT
 
. : . : . : . : . : . :
rJMSF040B23+ TGCTCATTTATGAGGTTTACAGCATAGCTATGTATTTCATAGGTTTGCTCTTT
rJMSF012L06+ TGCTCATTTATGAGGTTTACAGCATAGCTATGTATTTCATAGGTTTGCTCTTTTGTTCTT
                      ____________________________________________________________
consensus TGCTCATTTATGAGGTTTACAGCATAGCTATGTATTTCATAGGTTTGCTCTTTTGTTCTT