Contig 005637:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF012I18Sequence514013419 (2)ref|XP_009591396.1|3e-25PREDICTED: transcription factor PIF1-like [Nicotiana tomentosiformis]779005637 (2)ref|XP_004247109.1|3e-21PREDICTED: transcription factor PIF1-like [Solanum lycopersicum]
JMSF030K15Sequence663013419 (2)ref|XP_009591396.1|2e-45PREDICTED: transcription factor PIF1-like [Nicotiana tomentosiformis]784005637 (2)ref|XP_004247109.1|3e-21PREDICTED: transcription factor PIF1-like [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF030K15+ TACCATTGCCAGTGCAAATGATGTCTATGGGATGTGGGCATGGTCCCTATGATGTATC
                      ____________________________________________________________
consensus TACCATTGCCAGTGCAAATGATGTCTATGGGATGTGGGCATGGTCCCTATGATGTATC
 
. : . : . : . : . : . :
rJMSF030K15+ CTGGTATCCAGCAGTATATGCCAGCAATGGGTATGAGTATGGGCATGGGGATGTGCATGG
rJMSF012I18+ TGGTATCCAGCAGTATATGCCAGCAATGGGTATGAGTATGGGCATGGGGATGTGCATGG
                      ____________________________________________________________
consensus CTGGTATCCAGCAGTATATGCCAGCAATGGGTATGAGTATGGGCATGGGGATGTGCATGG
 
. : . : . : . : . : . :
rJMSF030K15+ AAATGGGCATGAATCGTGGAATGGTTCCATATCCACCACTTCTACCCGGTTCGTCATTGC
rJMSF012I18+ AAATGGGCATGAATCGTGGAATGGTTCCATATCCACCACTTCTACCCGGTTCGTCATTGC
                      ____________________________________________________________
consensus AAATGGGCATGAATCGTGGAATGGTTCCATATCCACCACTTCTACCCGGTTCGTCATTGC
 
. : . : . : . : . : . :
rJMSF030K15+ CAAATGCAACAGCAGCAGCACAGATAAGTCCACGGTTTGCTATGCCACCATCATTTCCAA
rJMSF012I18+ CAAATGCAACAGCAGCAGCACAGATAAGTCCACGGTTTGCTATGCCACCATCATTTCCAA
                      ____________________________________________________________
consensus CAAATGCAACAGCAGCAGCACAGATAAGTCCACGGTTTGCTATGCCACCATCATTTCCAA
 
. : . : . : . : . : . :
rJMSF030K15+ TGCCACCAGTTCCTATGCCTGATCCATCTAGAGTTCAGACCTCAAACCAACCCGATCCCA
rJMSF012I18+ TGCCACCAGTTCCTATGCCTGATCCATCTAGAGTTCAGACCTCAAACCAACCCGATCCCA
                      ____________________________________________________________
consensus TGCCACCAGTTCCTATGCCTGATCCATCTAGAGTTCAGACCTCAAACCAACCCGATCCCA
 
. : . : . : . : . : . :
rJMSF030K15+ TGCTAAACCCACTCATTACCCATAATCCTAACCAGCAACAAATACCAAACTGTGCTGATC
rJMSF012I18+ TGCTAAACCCACTCATTACCCATAATCCTAACCAGCAACAAATACCAAACTGTGCTGATC
                      ____________________________________________________________
consensus TGCTAAACCCACTCATTACCCATAATCCTAACCAGCAACAAATACCAAACTGTGCTGATC
 
. : . : . : . : . : . :
rJMSF030K15+ CATATCAGCAATTATTTGGTCTTCACCAGGCACAAGCAACATTACCGCTGAATCAAACAG
rJMSF012I18+ CATATCAGCAATTATTTGGTCTTCACCAGGCACAAGCAACATTACCGCTGAATCAAACAG
                      ____________________________________________________________
consensus CATATCAGCAATTATTTGGTCTTCACCAGGCACAAGCAACATTACCGCTGAATCAAACAG
 
. : . : . : . : . : . :
rJMSF030K15+ TGGAACATCCTATTAATAGCAAGCCAAGCAGCAGCAAAGATGTTGGGAATCCAGGGAATC
rJMSF012I18+ TGGAACATCCTATTAATAGCAAGCCAAGCAGCAGCAAAGATGTTGGGAATCCAGGGAATC
                      ____________________________________________________________
consensus TGGAACATCCTATTAATAGCAAGCCAAGCAGCAGCAAAGATGTTGGGAATCCAGGGAATC
 
. : . : . : . : . : . :
rJMSF030K15+ ATCAATCTCGTTGATGATTTCCAGGTAGGCCATTTATGGTAAGTCTACCACCAACCAAAT
rJMSF012I18+ ATCAATCTCGTTGATGATTTCCAGGTAGGCCATTTATGGTAAGTCTACCACCAACCAAAT
                      ____________________________________________________________
consensus ATCAATCTCGTTGATGATTTCCAGGTAGGCCATTTATGGTAAGTCTACCACCAACCAAAT
 
. : . : . : . : . : . :
rJMSF030K15+ TTTGTAGAGTAAGAGAAGCAGTAATGTGAATGCATGCAGTCTACATTTGCTTGCGGCCTC
rJMSF012I18+ TTTGTAGAGTAAGAGAAGCAGTAATGTGAATGCATGCAGTCTACATTTGCTTGCGGCCTC
                      ____________________________________________________________
consensus TTTGTAGAGTAAGAGAAGCAGTAATGTGAATGCATGCAGTCTACATTTGCTTGCGGCCTC
 
. : . : . : . : . : . :
rJMSF030K15+ TGGAATGCACCGCAGCTAACATGTTACATGTAACTATTCCTGTATGATCAAAGTTCCTTT
rJMSF012I18+ TGGAATGCACCGCAGCTAACATGTTACATGTAACTATTCCTGTATGATCAAAGTTCCTTT
                      ____________________________________________________________
consensus TGGAATGCACCGCAGCTAACATGTTACATGTAACTATTCCTGTATGATCAAAGTTCCTTT
 
. : . : . : . : . : . :
rJMSF030K15+ TATTTATTTGTTGCTTTTAATACCCTCTTGCAAGTGCTATATATGTTAGTATGATTTTAG
rJMSF012I18+ TATTTATTTGTTGCTTTTAATACCCTCTTGCAAGTGCTATATATGTTAGTATGATTTTAG
                      ____________________________________________________________
consensus TATTTATTTGTTGCTTTTAATACCCTCTTGCAAGTGCTATATATGTTAGTATGATTTTAG
 
. : . : . : . : . : . :
rJMSF030K15+ AATTTTAGTTAAGTTCTCAAAGAAATTACTATTTTAGTATATATTAGACATAGATTAACA
rJMSF012I18+ AATTTTAGTTAAGTTCTCAAAGAAATTACTATTTTAGTATATATTAGACATAGATTAACA
                      ____________________________________________________________
consensus AATTTTAGTTAAGTTCTCAAAGAAATTACTATTTTAGTATATATTAGACATAGATTAACA
 
. : . : . : . : . : . :
rJMSF030K15+ CCTTTA
rJMSF012I18+ CCTTTATGTTTTGAGGGTAAGGTTATTATGTATCTTAAATAAAGTCCTTTTGTTCCATTT
                      ____________________________________________________________
consensus CCTTTATGTTTTGAGGGTAAGGTTATTATGTATCTTAAATAAAGTCCTTTTGTTCCATTT