Contig 005633:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF011L19Sequence270001910 (12)gb|ACU19661.1|1e-27unknown [Glycine max]751005633 (4)ref|XP_009795130.1|3e-108PREDICTED: coatomer subunit gamma [Nicotiana sylvestris]
JMSF035M19Sequence665001910 (12)emb|CAN61312.1|2e-111hypothetical protein VITISV_013386 [Vitis vinifera]625005633 (4)ref|XP_007042213.1|1e-79Coatomer gamma-2 subunit / gamma-2 coat protein / gamma-2 COP, putative isoform
JMSF038K07Sequence636001910 (12)emb|CAN61312.1|3e-116hypothetical protein VITISV_013386 [Vitis vinifera]941005633 (4)ref|XP_009795130.1|3e-143PREDICTED: coatomer subunit gamma [Nicotiana sylvestris]
JMSF046B22Sequence748001910 (12)emb|CAN61312.1|2e-126hypothetical protein VITISV_013386 [Vitis vinifera]668005633 (4)ref|XP_007042213.1|9e-85Coatomer gamma-2 subunit / gamma-2 coat protein / gamma-2 COP, putative isoform

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF038K07+ GCTGAGACAGAATATGCAGTCAATGTGGTG
                      ____________________________________________________________
consensus GCTGAGACAGAATATGCAGTCAATGTGGTG
 
. : . : . : . : . : . :
rJMSF038K07+ AAACACATTTTTGATAGTCATGTTGTGTTCCAGTATAATTGCACGAACACAATTCCCGAG
                      ____________________________________________________________
consensus AAACACATTTTTGATAGTCATGTTGTGTTCCAGTATAATTGCACGAACACAATTCCCGAG
 
. : . : . : . : . : . :
rJMSF038K07+ CAACAGCTAGAGAATGTCACAGTTATTGTTGATGCTTCTGAAGCGGAGGAGTTTTCTGAA
                      ____________________________________________________________
consensus CAACAGCTAGAGAATGTCACAGTTATTGTTGATGCTTCTGAAGCGGAGGAGTTTTCTGAA
 
. : . : . : . : . : . :
rJMSF038K07+ GCAGCTTCCAAACCTCTGAAATCTCTTCCATATGATACCCCCGGGCAAACATTTGTAGCA
rJMSF011L19+ CATATGATACCCCCGGGCAAACATTTGTAGCA
                      ____________________________________________________________
consensus GCAGCTTCCAAACCTCTGAAATCTCTTCCATATGATACCCCCGGGCAAACATTTGTAGCA
 
. : . : . : . : . : . :
rJMSF038K07+ TTTGAGAAACCAGAAGGAGTCCCTGCAATTGGGAAATTCTCTAACACACTGAGGTTCATT
rJMSF046B22+ GAGGTTCATT
rJMSF011L19+ TTTGAGAANCCAGAAGGAGTCCCTGCAATTGGGAAATTCTCTAACACACTGAGGTTCATT
                      ____________________________________________________________
consensus TTTGAGAAACCAGAAGGAGTCCCTGCAATTGGGAAATTCTCTAACACACTGAGGTTCATT
 
. : . : . : . : . : . :
rJMSF038K07+ GTCAAAGAGGTTGATCCATCTACTGGTGAAGCTGAGGAAGATGGTGTGGAAGATGAATAC
rJMSF035M19+ AAGCTGAGGAAGATGGTGTGGAAGATGAATAC
rJMSF046B22+ GTCAAAGAGGNTGATCCNTCTACNGGTGAAGCTGAGGAAGATGGTGTGGAAGATGAATAC
rJMSF011L19+ GTCAAAGAGGTTGATCCATCTACTGGTGAAGCTGAGGAAGATGGTGTGGAAGATGAATAC
                      ____________________________________________________________
consensus GTCAAAGAGGTTGATCCATCTACTGGTGAAGCTGAGGAAGATGGTGTGGAAGATGAATAC
 
. : . : . : . : . : . :
rJMSF038K07+ CAGCTAGAGGACCTTGAGGTGGTTGCTGCTGATTACATGCTGAAAGTGGGTGTCTCCAAT
rJMSF035M19+ CAGCTAGAGGACCTTGAGGTGGTTGCTGCTGATTACATGCTGAAAGTGGGTGTCTCCAAT
rJMSF046B22+ CAGCTAGAGGACCTTGAGGTGGTTGCTGCTGATTACATGCTGAAAGNGGGTGTCTCCAAT
rJMSF011L19+ CAGCTAGAGGACCTTGAGGTGGTTGCTGCTGATTACATGCTGAAAGTGGGTGTCTCCAAT
                      ____________________________________________________________
consensus CAGCTAGAGGACCTTGAGGTGGTTGCTGCTGATTACATGCTGAAAGTGGGTGTCTCCAAT
 
. : . : . : . : . : . :
rJMSF038K07+ TTTAGGAATGCGTGGGAAACAATGGGCCCTGATTGTGAGCGTGTAGATGAATATGGTCTT
rJMSF035M19+ TTTAGGAATGCGTGGGAAACAATGGGCCCTGATTGTGAGCGTGTAGATGAATATGGTCTT
rJMSF046B22+ TTTAGGAATGCGTGGGAAACAANGGGCCCTGATTGTGAGCGTGTAGATGAATATGGTCTT
rJMSF011L19+ TTTAGGAATGCGTGGGAAACAATGGGCCCTGATTGTGAGCGTGTAGATGAATATGGTCTT
                      ____________________________________________________________
consensus TTTAGGAATGCGTGGGAAACAATGGGCCCTGATTGTGAGCGTGTAGATGAATATGGTCTT
 
. : . : . : . : . : . :
rJMSF038K07+ GGCCCTAGGGATAGCTTGGCTGAAGCTGTTAATGCAGTCATAAACCTTCTTGGCATGCAA
rJMSF035M19+ GGCCCTAGGGATAGCTTGGCTGAAGCTGTTAATGCAGTCATAAACCTTCTTGGCATGCAA
rJMSF046B22+ GGCCNTAGGGATAGCTNGGCNGAAGCTGTTAATGCAGTCATAAACCTTCTTGGCATGCAA
rJMSF011L19+ GGCCCTAGGGATAGCTTGGCTGAAGCTGTTAATGCAGTCATAAACCTTCTTGGCATGCAA
                      ____________________________________________________________
consensus GGCCCTAGGGATAGCTTGGCTGAAGCTGTTAATGCAGTCATAAACCTTCTTGGCATGCAA
 
. : . : . : . : . : . :
rJMSF038K07+ CCCTGTGAGGGCACAGAGGTTGTCCCTAACAATTCAAGATCGCACACGTGTTTATTATCT
rJMSF035M19+ CCCTGTGAGGGCACAGAGGTTGTCCCTAACAATTCAAGATCGCACACGTGTTTATTATCT
rJMSF046B22+ CCCTGTGAGGGCACAGAGGTTGTCCCTANCAATTCAAGATCGCACACGTGTTTATTATCT
rJMSF011L19+ CCCTGTGAGGGCACAGAGGTTGTCCCTAACAATTCAAGATCGCACACGTGTTTATTATCT
                      ____________________________________________________________
consensus CCCTGTGAGGGCACAGAGGTTGTCCCTAACAATTCAAGATCGCACACGTGTTTATTATCT
 
. : . : . : . : . : . :
rJMSF038K07+ GGTGTGTACATAGGCAGTGCTAAGGTTCTTGTGCGGTTATCATTTGGAATTGATGGGCCA
rJMSF035M19+ GGTGTGTACATAGGCAGTGCTAAGGTTCTTGTGCGGTTATCATTTGGAATTGATGGGCCA
rJMSF046B22+ GGTGTGTACATAGGCAGTGCTAAGGTTCTTGTGCGGTTATCATTTGGAATTGATGGGCCA
rJMSF011L19+ GGTGTGTACATAGGCAGTGCTAAGGTTCTTGTGCGGTTATCATTTGGAATTGATGGGCCA
                      ____________________________________________________________
consensus GGTGTGTACATAGGCAGTGCTAAGGTTCTTGTGCGGTTATCATTTGGAATTGATGGGCCA
 
. : . : . : . : . : . :
rJMSF038K07+ AAAGAGGTTGCCATGAAGTTGGCAGTTAGATCTGAAGATCTATCCATCAGTGATGCCATT
rJMSF035M19+ AAAGAGGTTGCCATGAAGTTGGCAGTTAGATCTGAAGATCTATCCATCAGTGATGCCATT
rJMSF046B22+ AAAGAGGTTGCCATGAAGTTGGCAGTTAGATCNGAAGATCTATCCATCAGTGATGCCATT
rJMSF011L19+ AAAGAGGTTGCCATGAAGTTGGCAGTTAGATCTGAAGATCTATCCATCAGTGATGCCATT
                      ____________________________________________________________
consensus AAAGAGGTTGCCATGAAGTTGGCAGTTAGATCTGAAGATCTATCCATCAGTGATGCCATT
 
. : . : . : . : . : . :
rJMSF038K07+ CATGAAATTGTGGCAAGTGGTTAGTT
rJMSF035M19+ CATGAAATTGTGGCAAGTGGTTAGTTACCTACTTACCTTACATACGGAAAGGTGAATATT
rJMSF046B22+ CATGAAATTGTGGCAAGTGGTTAGNTACCTACTTACCTTACATACGGAAAGGTGAATATT
rJMSF011L19+ CATGAAATTGTGGCAAGTGGTTAGTTACCTACTTACCTTACATACGGAAAGGTGAATATT
                      ____________________________________________________________
consensus CATGAAATTGTGGCAAGTGGTTAGTTACCTACTTACCTTACATACGGAAAGGTGAATATT
 
. : . : . : . : . : . :
rJMSF035M19+ TGCATTTTTACCCGGTCAAGAACTCAGGAGATTCATTTATGTTTTTGAGGGAACACTTGT
rJMSF046B22+ TGCATTTTTACCCGGTCAAGAACTCAGGAGATTCATTTATGTTTTTGAGGGAACACTTGT
rJMSF011L19+ TGCATTTTTACCCGGTCAAGAACTCAGGAGATTCATTTATGTTTTTGAGGGAACACTTGT
                      ____________________________________________________________
consensus TGCATTTTTACCCGGTCAAGAACTCAGGAGATTCATTTATGTTTTTGAGGGAACACTTGT
 
. : . : . : . : . : . :
rJMSF035M19+ GTTAACTACAAAATCACCATCTTGGCATATTTTCTGAAGCATAGGAGATTGGTTTAGTAA
rJMSF046B22+ GTTAACTACAAAATCACCATCTTGGCATATTTTCTGAAGCATAGGAGATTGGTTTAGTAA
rJMSF011L19+ GTTAACTACAAAATCACCATCTTGGCATATTTTCTGAAGCATAGGAGATTGGTTTAGTAA
                      ____________________________________________________________
consensus GTTAACTACAAAATCACCATCTTGGCATATTTTCTGAAGCATAGGAGATTGGTTTAGTAA
 
. : . : . : . : . : . :
rJMSF035M19+ TTGTTGTGTATTCGTTTTAAATTTTGAAACCAGTATGATTTCCTCTCATTGAT
rJMSF046B22+ TTGTNGTGTANTCGTTTTAAATTTTGAAAACAGTATGATTTCCTCTCATTGAT
rJMSF011L19+ TTGTTGTGTATTCGTTTTAAATTTTG-AAACAGTATGATTTCCTCTCATTGATATATTCT
                      ____________________________________________________________
consensus TTGTTGTGTATTCGTTTTAAATTTTGAAAACAGTATGATTTCCTCTCATTGATATATTCT