Contig 005632:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF011E20Sequence288006759 (5)803005632 (3)ref|XP_009786623.1|338PREDICTED: uncharacterized protein LOC104234713 [Nicotiana sylvestris] ref|XP_00
JMSF039O20Sequence670006759 (5)emb|CDP16208.1|5e-37unnamed protein product [Coffea canephora]813005632 (3)ref|XP_009786623.1|366PREDICTED: uncharacterized protein LOC104234713 [Nicotiana sylvestris] ref|XP_00
JMSF052I20Sequence196006759 (5)647005632 (3)ref|XP_009619401.1|315PREDICTED: uncharacterized protein LOC104111412 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF039O20+ GNAACATCAAGCAGCCTATTTTCAGTTGCAAGTTTAGTCAAGATC
                      ____________________________________________________________
consensus GNAACATCAAGCAGCCTATTTTCAGTTGCAAGTTTAGTCAAGATC
 
. : . : . : . : . : . :
rJMSF039O20+ GGGTACAACAGGTGGATCCGCTAAGCAACTTTTCGTCTAGTTTTGTTGATAGCTCTGATA
rJMSF052I20+ TTTGTTGATAGCTCTGATA
rJMSF011E20+ GGTACAACAGGTGGATCCGCTAAGCAACTTTTCGTCTAG-TTTGTTGATAGCTCTGATA
                      ____________________________________________________________
consensus GGGTACAACAGGTGGATCCGCTAAGCAACTTTTCGTCTAGTTTTGTTGATAGCTCTGATA
 
. : . : . : . : . : . :
rJMSF039O20+ TTGAAATAGAAAGGCGGGAGAGGAAGGGATGGAAGGTGAAGATACATGACCTCTCTGGCT
rJMSF052I20+ TNGAAATAGAAAGGCGGGAGAGGAAGGGATGGAAGGTGAAGATACATGACCTCTCTGGCT
rJMSF011E20+ TTGAAATAGAAAGGCGGGAGAGGAAGGGATGGAAGGTGAAGATACATGACCTCTCTGGCT
                      ____________________________________________________________
consensus TTGAAATAGAAAGGCGGGAGAGGAAGGGATGGAAGGTGAAGATACATGACCTCTCTGGCT
 
. : . : . : . : . : . :
rJMSF039O20+ CGGCTGTGGCAGCTGCGTTCATCACTACGCCATTCGTGCCATCGACCGGTTGTGATTGGG
rJMSF052I20+ CGGCTGTGGCAGCTGCGTTCATCNCTACGCCATTCGTGCCATCGACCGGTTGTGATTGGG
rJMSF011E20+ CGGCTGTGGCAGCTGCGTTCATCACTACGCCATTCGTGCCATCGACCGGTTGTGATTGGG
                      ____________________________________________________________
consensus CGGCTGTGGCAGCTGCGTTCATCACTACGCCATTCGTGCCATCGACCGGTTGTGATTGGG
 
. : . : . : . : . : . :
rJMSF039O20+ TTGACAGGTCCAACCCGGGAGCTTGGTTGATCGTACGCCCCGATCCTTGCATGCGCGAGA
rJMSF052I20+ TTGACAGGTCCAACCCGGGAGCTTGGTTGATCGTACGCCCCGATCCTTGCATGCGCGAGA
rJMSF011E20+ TTGACAGGTCCAACCCGGGAGCTTGGTTGATCGTACGCCCCGATCCTTGCATGCGCGAGA
                      ____________________________________________________________
consensus TTGACAGGTCCAACCCGGGAGCTTGGTTGATCGTACGCCCCGATCCTTGCATGCGCGAGA
 
. : . : . : . : . : . :
rJMSF039O20+ GCTGGCAACCGTGGGGGAAGCTCGAAGCATGGCGTGAACGAGGCATCAGAGACTCCATCT
rJMSF052I20+ GCTGGCAACCGTGGGGGAAGCTCGAAGCATGGCGTGAACGAGGCATCAGAGACTCCATCT
rJMSF011E20+ GCTGGCAACCGTGGGGGAAGCTCGAAGCATGGCGTGAACGAGGCATCAGAGACTCCATCT
                      ____________________________________________________________
consensus GCTGGCAACCGTGGGGGAAGCTCGAAGCATGGCGTGAACGAGGCATCAGAGACTCCATCT
 
. : . : . : . : . : . :
rJMSF039O20+ GCTGCCGCTTCCACCTCTTGTCGGATGGTCCAGAGGGGGGCGGGGATCTCCTCATGTCGG
rJMSF052I20+ GNTGCCGCTTCCACCTCTTNTCGGATGGTCCAGAGGGGGGCGGGGATCTCCTCATGTCGG
rJMSF011E20+ GCTGCCGCTTCCACCTCTTGTCGGATGGTCCAGAGGGGGGCGGGGATCTCCTCATGTCGG
                      ____________________________________________________________
consensus GCTGCCGCTTCCACCTCTTGTCGGATGGTCCAGAGGGGGGCGGGGATCTCCTCATGTCGG
 
. : . : . : . : . : . :
rJMSF039O20+ AGATCCTCATCAGCGCGGAGAAGGGCGGGGAGTTCTACATCGACACTGACAAACAGGTCC
rJMSF052I20+ AGATCCTCATCAGCGCGGAGAAGGGCGGGGAGTTNTACATCGACACTGACAAACAGGTCC
rJMSF011E20+ AGATCCTCATCAGCGCGGAGAAGGGCGGGGAGTTCTACATCGACACTGACAAACAGGTCC
                      ____________________________________________________________
consensus AGATCCTCATCAGCGCGGAGAAGGGCGGGGAGTTCTACATCGACACTGACAAACAGGTCC
 
. : . : . : . : . : . :
rJMSF039O20+ GAGCTGCAGCGAGTCCCGTGCCCAGTCCAAGAAGCAGCGGTGACTTTTCTGCGCTGAGTC
rJMSF052I20+ GAGCTGCAGCGAGTCCCGTGCCCAGTCCAAGAAGCAGCGGTGACTTTTCTGCGCTGAGTC
rJMSF011E20+ GAGCTGCAGCGAGTCCCGTGCCCAGTCCAAGAAGCAGCGGTGACTTTTCTGCGCTGAGTC
                      ____________________________________________________________
consensus GAGCTGCAGCGAGTCCCGTGCCCAGTCCAAGAAGCAGCGGTGACTTTTCTGCGCTGAGTC
 
. : . : . : . : . : . :
rJMSF039O20+ CTGTTGTGGGCGGCTTCGTCATGAGCTGTAGAGTGCAAGGCGAAGGCAAGTACAGCAAGC
rJMSF052I20+ CTGTTGTGGGCGGNTTCGTCATGAGCTGTAGAGTGCAAGGCGAAGGCAAGTACAGCAAGC
rJMSF011E20+ CTGTTGTGGGCGGCTTCGTCATGAGCTGTAGAGTGCAAGGCGAAGGCAAGTACAGCAAGC
                      ____________________________________________________________
consensus CTGTTGTGGGCGGCTTCGTCATGAGCTGTAGAGTGCAAGGCGAAGGCAAGTACAGCAAGC
 
. : . : . : . : . : . :
rJMSF039O20+ TCCTCGTGCAACTTGCCATGCGACACGTCACCTGCGTCGAGGATGCAGCCATTTTCATGG
rJMSF052I20+ TCCTCGTGCAACTTGCCATGCGACACGTCACCTGCGTCGAGGATGCAGCCATTTTCATGG
rJMSF011E20+ TCCTCGTGCAACTTGCCATGCGACACGTCACCTGCGTCGAGGATGCAGCCATTTTCATGG
                      ____________________________________________________________
consensus TCCTCGTGCAACTTGCCATGCGACACGTCACCTGCGTCGAGGATGCAGCCATTTTCATGG
 
. : . : . : . : . : . :
rJMSF039O20+ CGCTCGCTGCAGCTGTGGATCTCAGTATCGAGGCGTGCAGGCCGTTCAGAAGGCTCAGGA
rJMSF052I20+ CGCTCGCTGCAGCTGTGGATCTCAGTATCGAGGCGTGCAGGCCGTTCAGAA
rJMSF011E20+ CGCTCGCTGCAGCTGTGGATCTCAGTATCGAGGCGTGCAGGCCGTTCAGAAGGCTCAGGA
                      ____________________________________________________________
consensus CGCTCGCTGCAGCTGTGGATCTCAGTATCGAGGCGTGCAGGCCGTTCAGAAGGCTCAGGA
 
. : . : . : . : . : . :
rJMSF039O20+ GAGGTACTCGCCATTCCTGGTGATATACATTAGTGTATAACTCTATAAATATGCATATAT
rJMSF011E20+ GAGGTACTCGCCATTCCTGGTGATATACATTAGTGTATAACTCTATAAATATGCATATAT
                      ____________________________________________________________
consensus GAGGTACTCGCCATTCCTGGTGATATACATTAGTGTATAACTCTATAAATATGCATATAT
 
. : . : . : . : . : . :
rJMSF039O20+ GATGTTCATGTGTTTCCAGAAACTAAGGAAACCTCCCATGTACTCTCC
rJMSF011E20+ GATGTTCATGTGTTTCCAGAAACTAAGGAAACCTCCCATGTACTCTCCTGTAACCAATGA
                      ____________________________________________________________
consensus GATGTTCATGTGTTTCCAGAAACTAAGGAAACCTCCCATGTACTCTCCTGTAACCAATGA