Contig 005627:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014F16Sequence466005627 (9)ref|XP_009620266.1|5e-30PREDICTED: probable CCR4-associated factor 1 homolog 7 [Nicotiana tomentosiform820005627 (9)ref|XP_009801027.1|4e-156PREDICTED: probable CCR4-associated factor 1 homolog 7 [Nicotiana sylvestris] r
JMSF010P01Sequence333005627 (9)775005627 (9)ref|XP_009801027.1|7e-135PREDICTED: probable CCR4-associated factor 1 homolog 7 [Nicotiana sylvestris] r
JMSF038D19Sequence660005627 (9)ref|XP_002527306.1|3e-60ccr4-associated factor, putative [Ricinus communis] gb|EEF35058.1| ccr4-associat895005627 (9)ref|XP_009801027.1|6e-166PREDICTED: probable CCR4-associated factor 1 homolog 7 [Nicotiana sylvestris] r
JMSF038N12Sequence641010829 (7)ref|XP_009598879.1|4e-64PREDICTED: acyl carrier protein 2, mitochondrial-like [Nicotiana tomentosiformi845005627 (9)ref|XP_009801027.1|5e-156PREDICTED: probable CCR4-associated factor 1 homolog 7 [Nicotiana sylvestris] r
JMSF040C23Sequence659005627 (9)ref|XP_002527306.1|3e-60ccr4-associated factor, putative [Ricinus communis] gb|EEF35058.1| ccr4-associat805005627 (9)ref|XP_009801027.1|7e-143PREDICTED: probable CCR4-associated factor 1 homolog 7 [Nicotiana sylvestris] r

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF040C23- AGGCCTGCAGACCCCCATTTCC
JMSF010P01- AGGCCTGCAGACCCCCATTTCC
JMSF038D19- GACACAAGGCCTGCAGACCCCCATTTCC
                      ____________________________________________________________
consensus GACACAAGGCCTGCAGACCCCCATTTCC
 
. : . : . : . : . : . :
JMSF040C23- CTTTTTCTTTCTCTTCATCTTCTTCCTCTCACTAAACTCTCTCTCTCTCTCCCTTTCTCT
JMFF014F16- AAACTCTCTCTCTCTCTCCCTTTCTCT
JMSF010P01- CTTTTTCTTTCTCTTCATCTTCTTCCTCTCACTAAACTCTCTCTCTCTCTCCCTTTCTCT
JMSF038D19- CTTTTTCTTTCTCTTCATCTTCTTCCTCTCACTAAACTCTCTCTCTCTCTCCCTTTCTCT
                      ____________________________________________________________
consensus CTTTTTCTTTCTCTTCATCTTCTTCCTCTCACTAAACTCTCTCTCTCTCTCCCTTTCTCT
 
. : . : . : . : . : . :
JMSF040C23- CTCTCTCTCTCCNTGTTTCTCTCTCTTAAATTGACTCTTCCGACTTCTCTCAGATCAGGC
JMFF014F16- CTCTCTCTCTCCCTGTTTCTCTCTCTTAAATTGACTCTTCCGACTTCTCTCAGATCAGGC
JMSF010P01- CTCTCTCTCTCCCTGTTTCTCTCTCTTAAATTGACTCTTCCGACTTCTCTCAGATCAGGC
JMSF038D19- CTCTCTCTCTCCCTGTTTCTCTCTCTTAAATTGACTCTTCCGACTTCTCTCAGATCAGGC
                      ____________________________________________________________
consensus CTCTCTCTCTCCCTGTTTCTCTCTCTTAAATTGACTCTTCCGACTTCTCTCAGATCAGGC
 
. : . : . : . : . : . :
JMSF040C23- TAGCTATATTGGCTTTTTGGATTGTGCTAATAAAAGGATTAAAAGCAAATCTAGCTGAAA
JMFF014F16- TAGCTATATTGGCTTTTTGGATTGTGCTAATAAAAGGATTAAAAGCAAATCTANCTGAAA
JMSF010P01- TAGCTATATTGGCTTTTTGGATTGTGCTAATAAAAGGATTAAAAGCAAATCTAGCTGAAA
JMSF038D19- TAGCTATATTGGCTTTTTGGANTGTGCTAATAAAAGGATTAAAAGCAAATCTAGCTGAAA
                      ____________________________________________________________
consensus TAGCTATATTGGCTTTTTGGATTGTGCTAATAAAAGGATTAAAAGCAAATCTAGCTGAAA
 
. : . : . : . : . : . :
JMSF040C23- CCCCAACAAAAAGGATGAATTGGTCAAATCCCAAGCCTGCTTGATCCATCTAATTAAATA
JMFF014F16- CCCCAACAAAAAGGATGAATTGGTCAAATCCCAAGCCTGCTTGATCCATCTAATTAAATA
JMSF010P01- CCCCAACAAAAAGGATGAATTGGTCAAATCCCAAGCCTGCTTGATCCATCTAATTAAATA
JMSF038D19- CCCCAACAAAAAGGATGAATTGGTCAAATCCCAAGCCTGCTTGATCCATCTAATTAAATA
                      ____________________________________________________________
consensus CCCCAACAAAAAGGATGAATTGGTCAAATCCCAAGCCTGCTTGATCCATCTAATTAAATA
 
. : . : . : . : . : . :
JMSF040C23- ACANGGCCATAATAATTGATTCACTGAAAAACCTGCGCTTCATTTGTGACCGATACAAAT
JMFF014F16- ACAAGGCCATAATAATTGATTCACTGAAAAACCTGCGCTTCATTTGTGACCGATACAAAT
JMSF010P01- ACAAGGCCATAATAANTGATTCACTGAAAAACCTGCGCTTCATTTGTGACCGATACAAAT
JMSF038D19- ACANGGCCATAATAATTGATTCACTGAAAAACCTGCGCTTCATTTGTGACCGATACAAAT
                      ____________________________________________________________
consensus ACAAGGCCATAATAATTGATTCACTGAAAAACCTGCGCTTCATTTGTGACCGATACAAAT
 
. : . : . : . : . : . :
JMSF040C23- ATGTCTGAGTTGCTGAAAAATGATTCTATCCAAATTAGAGAGGTTTGGAATGATAATCTT
JMFF014F16- ATGTCTGAGTTGCTGAAAAATGATTCTATCCAAATTAGAGAGGTTTGGAATGATAATCTT
JMSF010P01- ATGTCTGAG
JMSF038D19- ATGTCTGAGTTGCTGAAAAATGATTCTATCCAAATTAGAGAGGTTTGGAATGATAATCTT
                      ____________________________________________________________
consensus ATGTCTGAGTTGCTGAAAAATGATTCTATCCAAATTAGAGAGGTTTGGAATGATAATCTT
 
. : . : . : . : . : . :
JMSF040C23- GAAAAAGAGTTTGCTCTTATCCGTGAAATCGTTGATGAGTATCCTTTTATCGCCNTGGAC
JMFF014F16- GAAAAAGAGTTTGCTCTTATCCGNGAAATCGTTGATGAGTATCCTTTTATCGCCATGGAC
JMSF038D19- GAAAAAGAGTTTGCTCTTATCCGTGAAATCGTTGATGAGTATCCTTTTATCGCCNTGGAC
rJMSF038N12+ TTTTATCGCCATGGAC
rJMFF014F16+ ATCGCCATGGAC
rJMSF038D19+ AAAAAGAGTTTGCTCTTATCCGTGAAATCGTTGATGAGTATCCTTTTATCGCCATGGAC
                      ____________________________________________________________
consensus GAAAAAGAGTTTGCTCTTATCCGTGAAATCGTTGATGAGTATCCTTTTATCGCCATGGAC
 
. : . : . : . : . : . :
JMSF040C23- ACTGAGTTTCCCGGGGTAGTTCTTCGGCCTGTTGGCAACTTCAAGAACATTAACGAGTAT
JMFF014F16- ACTGAGTTTCCCGGGGTAGTTCTTCGGCCTGTTGGCAACTTCAAGAACATTAACGAGTAT
JMSF038D19- ACTGAGTTTCCCGGGGTAGTTCTTCGGCCTGTTGGCAACTTCAAGAACATTAACGAGTAT
rJMSF038N12+ ACTGAGTTTCCCGGGGTAGTTCTTCGGCCTGTTGGCAACTTCAAGAACATTAACGAGTAT
rJMFF014F16+ ACTGAGTTTCCCGGGGTAGTTCTTCGGCCTGTTGGCAACTTCAAGAACATTAACGAGTAT
rJMSF038D19+ ACTGAGTTTCCCGGGGTAGTTCTTCGGCCTGTTGGCAACTTCAAGAACATTAACGAGTAT
rJMSF040C23+ GCAACTTCAAGAACATTAACGAGTAT
                      ____________________________________________________________
consensus ACTGAGTTTCCCGGGGTAGTTCTTCGGCCTGTTGGCAACTTCAAGAACATTAACGAGTAT
 
. : . : . : . : . : . :
JMSF040C23- AACTATCAGACGTTGAAGGATAATGTTGATATGTTGAAGTTGATTCAATTAGGTCTCACA
JMFF014F16- AACTATCANACGTTGAAG
JMSF038D19- AACTATCAGACGTTGAAGGATAATGTTGATATGTTGAAGTTGATTCAATTAGGTCTCACA
rJMSF038N12+ AACTATCAGACGTTGAAGGATAATGTTGATATGTTGAAGTNGATTCAATTAGGTCTCACA
rJMFF014F16+ AACTATCAGACGTTGAAGGATAATGTTGATATGTTGAAGTTGATTCAATTAGGTCTCACA
rJMSF038D19+ AACTATCAGACGTTGAAGGATAATGTTGATATGTTGAAGTTGATTCAATTAGGTCTCACA
rJMSF040C23+ AACTATCAGACGTTGAAGGATAATGTTGATATGTTGAAGTTGATTCAATTAGGTCTCACA
rJMSF010P01+ TCAGACGNTGAAGGATAATGTTGATATGTTGAAGTTGATTCAATTAGGTCTCACA
                      ____________________________________________________________
consensus AACTATCAGACGTTGAAGGATAATGTTGATATGTTGAAGTTGATTCAATTAGGTCTCACA
 
. : . : . : . : . : . :
JMSF040C23- TTTTCAGATGAAGATGGTAACTTGCCTACNTGTGGAACAGATCACTATTGCATTTGGCAG
JMSF038D19- TTTTCAGATGAAGATGGTAACTTGCCTACNTGTGGAACAGATCACTATTGCATTTGGCAG
rJMSF038N12+ TTTTCAGATGAAGATGGTAACTTGCCTACATGTGGAACAGATCACTATTGCATTTGGCAG
rJMFF014F16+ TTTTCAGATGAAGATGGTAACTTGCCTACATGTGGAACAGATCACTATTGCATTTGGCAG
rJMSF038D19+ TTTTCAGATGAAGATGGTAACTTGCCTACATGTGGAACAGATCACTATTGCATTTGGCAG
rJMSF040C23+ TTTTCAGATGAAGATGGTAACTTGCCTACATGTGGAACAGATCACTATTGCATTTGGCAG
rJMSF010P01+ TTTTCAGATGAAGATGGTAACTTGCCTACATGTGGAACAGATCACTATTGCATTTGGCAG
                      ____________________________________________________________
consensus TTTTCAGATGAAGATGGTAACTTGCCTACATGTGGAACAGATCACTATTGCATTTGGCAG
 
. : . : . : . : . : . :
JMSF040C23- TTCAACTTTCGTGAATTTGACATGAGCGAGG
JMSF038D19- TTCAACTTTCGTGAATTTGACATGAGCGAGGA
rJMSF038N12+ TTCAACTTTCGTGAATTTGACATGAGCGAGGATATCTTTGCAAATGATTCCATCGACCTG
rJMFF014F16+ TTCAACTTTCGTGAATTTGACATGAGCGAGGATATCTTTGCAAATGATTCCATCGACCTG
rJMSF038D19+ TTCAACTTTCGTGAATTTGACATGAGCGAGGATATCTTTGCAAATGATTCCATCGACCTG
rJMSF040C23+ TTCAACTTTCGTGAATTTGACATGAGCGAGGATATCTTTGCAAATGATTCCATCGACCTG
rJMSF010P01+ TTCAACTTTCGTGAATTTGACATGAGCGAGGATATCTTTGCAAATGATTCCATCGACCTG
                      ____________________________________________________________
consensus TTCAACTTTCGTGAATTTGACATGAGCGAGGATATCTTTGCAAATGATTCCATCGACCTG
 
. : . : . : . : . : . :
rJMSF038N12+ TTGAGGCAATCTGGCATTGATTTCAAGAAGAACAATGAAATGGGGATCGATGCAACCCGC
rJMFF014F16+ TTGAGGCAATCTGGCATTGATTTCAAGAAGAACAATGAAATGGGGATCGATGCAACCCGC
rJMSF038D19+ TTGAGGCAATCTGGCATTGATTTCAAGAAGAACAATGAAATGGGGATCGATGCAACCCGC
rJMSF040C23+ TTGAGGCAATCTGGCATTGATTTCAAGAAGAACAATGAAATGGGGATCGATGCAACCCGC
rJMSF010P01+ TTGAGGCAATCTGGCATTGATTTCAAGAAGAACAATGAAATGGGGATCGATGCAACCCGC
                      ____________________________________________________________
consensus TTGAGGCAATCTGGCATTGATTTCAAGAAGAACAATGAAATGGGGATCGATGCAACCCGC
 
. : . : . : . : . : . :
rJMSF038N12+ TTTGGTGAGCTACTGATGTCGTCTGGTATTGTATTGAACGATGGTGTGCAATGGGTGACA
rJMFF014F16+ TTTGGTGAGCTACTGATGTCGTCTGGTATTGTATTGAACGATGGTGTGCAATGGGTGACA
rJMSF038D19+ TTTGGTGAGCTACTGATGTCGTCTGGTATTGTATTGAACGATGGTGTGCAATGGGTGACA
rJMSF040C23+ TTTGGTGAGCTACTGATGTCGTCTGGTATTGTATTGAACGATGGTGTGCAATGGGTGACA
rJMSF010P01+ TTTGGTGAGCTACTGATGTCGTCTGGTATTGTATTGAACGATGGTGTGCAATGGGTGACA
                      ____________________________________________________________
consensus TTTGGTGAGCTACTGATGTCGTCTGGTATTGTATTGAACGATGGTGTGCAATGGGTGACA
 
. : . : . : . : . : . :
rJMSF038N12+ TTTCACAGTGGATACGACTTTGGGTACCTCCTCAAGCTATTAACCTGCAAGAATTTACCA
rJMFF014F16+ TTTCACAGTGGATACGACTTTGGGTACCTCCTCAAGCTATTAACCTGCAAGAATTTACCA
rJMSF038D19+ TTTCACAGTGGATACGACTTTGGGTACCTCCTCAAGCTATTAACCTGCAAGAATTTACCA
rJMSF040C23+ TTTCACAGTGGATACGACTTTGGGTACCTCCTCAAGCTATTAACCTGCAAGAATTTACCA
rJMSF010P01+ TTTCACAGTGGATACGACTTTGGGTACCTCCTCAAGCTATTAACCTGCAAGAATTTACCA
                      ____________________________________________________________
consensus TTTCACAGTGGATACGACTTTGGGTACCTCCTCAAGCTATTAACCTGCAAGAATTTACCA
 
. : . : . : . : . : . :
rJMSF038N12+ GATACCCAGAGTGGGTTCTTCGATTTGCTGAATATGTACTTCCCAATAGTGTACGACATT
rJMFF014F16+ GATACCCAGAGTGGGTTCTTCGATTTGCTGAATATGTACTTCCCAATAGTGTACGACATT
rJMSF038D19+ GATACCCAGAGTGGGTTCTTCGATTTGCTGAATATGTACTTCCCAATAGTGTACGACATT
rJMSF040C23+ GATACCCAGAGTGGGTTCTTCGATTTGCTGAATATGTACTTCCCAATAGTGTACGACATT
rJMSF010P01+ GATACCCAGAGTGGGTTCTTCGATTTGCTGAATATGTACTTCCCAATAGTGTACGACATT
                      ____________________________________________________________
consensus GATACCCAGAGTGGGTTCTTCGATTTGCTGAATATGTACTTCCCAATAGTGTACGACATT
 
. : . : . : . : . : . :
rJMSF038N12+ AAGCACTTGATGAGGTTCTGCAATAGCCTCCACGGTGGGTTAAACAAACTCGCAGAGCTG
rJMFF014F16+ AAGCACTTGATGAGGTTCTGCAATAGCCTCCACGGTGGGTTAAACAAACTCGCAGAGCTG
rJMSF038D19+ AAGCACTTGATGAGGTTCTGCAATAGCCTCCACGGTGGGTTAAACAAACTCGCAGAGCTG
rJMSF040C23+ AAGCACTTGATGAGGTTCTGCAATAGCCTCCACGGTGGGTTAAACAAACTCGCAGAGCTG
rJMSF010P01+ AAGCACTTGATGAGGTTCTGCAATAGCCTCCACGGTGGGTTAAACAAACTCGCAGAGCTG
                      ____________________________________________________________
consensus AAGCACTTGATGAGGTTCTGCAATAGCCTCCACGGTGGGTTAAACAAACTCGCAGAGCTG
 
. : . : . : . : . : . :
rJMSF038N12+ TTGGAGGTCGAGAGAATCGGGATCTGCCATCAAGCTGGTTCAGATAGCTTGCTCACCTCT
rJMFF014F16+ TTGGAGGTCGAGAGAATCGGGATCTGCCATCAAGCTGGTTCAGATAGCTTGCTCACCTCT
rJMSF038D19+ TTGGAGGTCGAGAGAATCGGGATCTGCCATCAAGCTGGTTCAGATAGCTTGCTCACCTCT
rJMSF040C23+ TTGGAGGTCGAGAGAATCGGGATCTGCCATCAAGCTGGTTCAGATAGCTTGCTCACCTCT
rJMSF010P01+ TTGGAGGTCGAGAGAATCGGGATCTGCCATCAAGCTGGTTCAGATAGCTTGCTCACCTCT
                      ____________________________________________________________
consensus TTGGAGGTCGAGAGAATCGGGATCTGCCATCAAGCTGGTTCAGATAGCTTGCTCACCTCT
 
. : . : . : . : . : . :
rJMSF038N12+ TGCGCATTCAAGAAGTTGAAGGAAAACTTCTTTAGTGGCGCAACCGAGAAATATGCAGGT
rJMFF014F16+ TGCGCATTCAAGAAGTTGAAGGAAAACTTCTTTAGTGGCGCAACCGAGAAATATGCAGGT
rJMSF038D19+ TGCGCATTCAAGAAGTTGAAGGAAAACTTCTTTAGTGGCGCAACCGAGAAATATGCAGGT
rJMSF040C23+ TGCGCATTCAAGAAGTTGAAGGAAAACTTCTTTAGTGGCGCAACCGAGAAATATGCAGGT
rJMSF010P01+ TGCGCATTCAAGAAGTTGAAGGAAAACTTCTTTAGTGGCGCAACCGAGAAATATGCAGGT
                      ____________________________________________________________
consensus TGCGCATTCAAGAAGTTGAAGGAAAACTTCTTTAGTGGCGCAACCGAGAAATATGCAGGT
 
. : . : . : . : . : . :
rJMSF038N12+ GTTCTGTATGGTCTCGGTGTTGAAAATGGTTCTGACAATAAATAGACTTAAGGAGGAGGT
rJMFF014F16+ GTTCTGTATGGTCTCGGTGTTGAAAATGGTTCTGACAATAAATAGACTTAAGGAGGAGGT
rJMSF038D19+ GTTCTGTATGGTCTCGGTGTTGAAAATGGTTCTGACAATAAATAGACTTAAGGAGGAGGT
rJMSF040C23+ GTTCTGTATGGTCTCGGTGTTGAAAATGGTTCTGACAATAAATAGACTTAAGGAGGAGGT
rJMSF010P01+ GTTCTGTATGGTCTCGGTGTTGAAAATGGTTCTGACAATAAATAGACTTAAGGAGGAGGT
                      ____________________________________________________________
consensus GTTCTGTATGGTCTCGGTGTTGAAAATGGTTCTGACAATAAATAGACTTAAGGAGGAGGT
 
. : . : . : . : . : . :
rJMSF038N12+ AATGTACTTGTGAAGAAAAATAAGAAGATTAGAAGAGTTTATGTATGTTGAGTTGTGTAG
rJMFF014F16+ AATGTACTTGTGAAGAAAAATAAGAAGATTAGAAGAGTTTATGTATGTTGAGTTGTGTAG
rJMSF038D19+ AATGTACTTGTGAAGAAAAATAAGAAGATTAGAAGAGTTTATGTATGTTGAGTTGTGTAG
rJMSF040C23+ AATGTACTTGTGAAGAAAAATAAGAAGATTAGAAGAGTTTATGTATGTTGAGTTGTGTAG
rJMSF010P01+ AATGTACTTGTGAAGAAAAATAAGAAGATTAGAAGAGTTTATGTATGTTGAGTTGTGTAG
                      ____________________________________________________________
consensus AATGTACTTGTGAAGAAAAATAAGAAGATTAGAAGAGTTTATGTATGTTGAGTTGTGTAG
 
. : . : . : . : . : . :
rJMSF038N12+ AAGAA-CATGTATCATGTCTGTAAGAAATT
rJMFF014F16+ AAGAA-CATGTATCATGTCTTTAAGAAAT
rJMSF038D19+ AAGAA-CATGTATCATGTCTGTAAGAAATTTAATTGTGATCAAATATCTG
rJMSF040C23+ AAGAA-CATGTATCATGTCTGTAAGAAATTTAATTGTGATCAAATATCTG
rJMSF010P01+ AAGAACCATGTATCATGTCTGTAAGAAATTTAATTGTGATCAAATATCTGTAACGACAAT
                      ____________________________________________________________
consensus AAGAA-CATGTATCATGTCTGTAAGAAATTTAATTGTGATCAAATATCTGTAACGACAAT