Contig 005621:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008F06Sequence401011927 (4)gb|KDP26452.1|1e-18hypothetical protein JCGZ_17610 [Jatropha curcas]783005621 (3)gb|AIU48889.1|3e-93transducin/WD40 repeat-like superfamily protein, partial [Manihot esculenta]
JMFF009A02Sequence396011927 (4)gb|KDP26452.1|1e-18hypothetical protein JCGZ_17610 [Jatropha curcas]669005621 (3)gb|AIU48905.1|8e-67transducin/WD40 repeat-like superfamily protein, partial [Vitis vinifera]
JMSF010B14Sequence251011927 (4)ref|XP_009764022.1|8e-04PREDICTED: WD repeat-containing protein 70 [Nicotiana sylvestris]741005621 (3)gb|AIU48905.1|6e-78transducin/WD40 repeat-like superfamily protein, partial [Vitis vinifera]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF008F06+ ATCAGGTGTTTGCAACGAGTGGGGATAA
                      ____________________________________________________________
consensus ATCAGGTGTTTGCAACGAGTGGGGATAA
 
. : . : . : . : . : . :
rJMFF008F06+ GCGCGAGGGAGGAACTCATATCCTATATGATCCAACCCTCAGTGAAAGAGGAGCTCTTGT
rJMSF010B14+ CAGTGAAAGAGGAGCTCTTGT
                      ____________________________________________________________
consensus GCGCGAGGGAGGAACTCATATCCTATATGATCCAACCCTCAGTGAAAGAGGAGCTCTTGT
 
. : . : . : . : . : . :
rJMFF008F06+ TTGTGTTGCACGTGCACCGAGGACAAAGTCTGTTGATGATTTCCAGGCACAGCCTGTGAT
rJMFF009A02+ GTCTGTTGATGATTTCCAGGCACAGCCTGTGAT
rJMSF010B14+ TTGTGTTGCACGTGCACCGAGGACAAAGTCTGTTGATGATTTCCAGGCACAGCCTGTGAT
                      ____________________________________________________________
consensus TTGTGTTGCACGTGCACCGAGGACAAAGTCTGTTGATGATTTCCAGGCACAGCCTGTGAT
 
. : . : . : . : . : . :
rJMFF008F06+ TCACAATCCACATGCACTACCCTTATTCCGGGACCAGCCTAGCCGTAAACGCCAGCGCGA
rJMFF009A02+ TCACAATCCACATGCACTACCCTTATTCCGGGACCAGCCTAGCCGTAAACGCCAGCGCGA
rJMSF010B14+ TCACAATCCACATGCACTACCCTTATTCCGGGACCAGCCTAGCCGTAAACGCCAGCGCGA
                      ____________________________________________________________
consensus TCACAATCCACATGCACTACCCTTATTCCGGGACCAGCCTAGCCGTAAACGCCAGCGCGA
 
. : . : . : . : . : . :
rJMFF008F06+ GAAAATGTTGAAAGACCCCCTCAAGGCTCATAAGCCTGAACTGCCTATAACAGGGCCTGG
rJMFF009A02+ GAAAATGTTGAAAGACCCCCTCAAGGCTCATAAGCCTGAACTGCCTATAACAGGGCCTGG
rJMSF010B14+ GAAAATGTTGAAAGACCCCCTCAAGGCTCATAAGCCTGAACTGCCTATAACAGGGCCTGG
                      ____________________________________________________________
consensus GAAAATGTTGAAAGACCCCCTCAAGGCTCATAAGCCTGAACTGCCTATAACAGGGCCTGG
 
. : . : . : . : . : . :
rJMFF008F06+ TCACGGTGGAAGGGTCGGTTCAACCAAGGGAAGCTTGTTAACACAATACCTTCTCAAGCA
rJMFF009A02+ TCACGGTGGAAGGGTCGGTTCAACCAAGGGAAGCTTGTTAACACAATACCTTCTCAAGCA
rJMSF010B14+ TCACGGTGGAAGGGTCGGTTCAACCAAGGGAAGCTTGTTAACACAATACCTTCTCAAGCA
                      ____________________________________________________________
consensus TCACGGTGGAAGGGTCGGTTCAACCAAGGGAAGCTTGTTAACACAATACCTTCTCAAGCA
 
. : . : . : . : . : . :
rJMFF008F06+ AGGCGGGTTGATCAAGGAGACATGGATGGACGAAGATCCTAGAGAAGCTATCCTAAAGTA
rJMFF009A02+ AGGCGGGTTGATCAAGGAGACATGGATGGACGAAGATCCTAGAGAAGCTATCCTAAAGTA
rJMSF010B14+ AGGCGGGTTGATCAAGGAGACATGGATGGACGAAGATCCTAGAGAAGCTATCCTAAAGTA
                      ____________________________________________________________
consensus AGGCGGGTTGATCAAGGAGACATGGATGGACGAAGATCCTAGAGAAGCTATCCTAAAGTA
 
. : . : . : . : . : . :
rJMFF008F06+ CGCTGATGTAGCTGCAAATGAACCAAAATACGTGGCTCCAGCATACGCTCAAACACAGCC
rJMFF009A02+ CGCTGATGTAGCTGCAAATGAACCAAAATACGTGGCTCCAGCATACGCTCAAACACAGCC
rJMSF010B14+ CGCTGATGTAGCTGCAAATGAACCAAAATACGTGGCTCCAGCATACGCTCAAACACAGCC
                      ____________________________________________________________
consensus CGCTGATGTAGCTGCAAATGAACCAAAATACGTGGCTCCAGCATACGCTCAAACACAGCC
 
. : . : . : . : . : . :
rJMFF008F06+ TCAACCGCTCTTCCAAGCATCGGATGATGAAGACGAAGAGAAGTGATTAGAAATTATTTC
rJMFF009A02+ TCAACCGCTCTTCCAAGCATCGGATGATGAAGACGAAGAGAAGTGATTAGAAATTATTTC
rJMSF010B14+ TCAACCGCTCTTCCAAGCATCGGATGATGAAGACGAAGAGAAGTGATTAGAAATTATTTC
                      ____________________________________________________________
consensus TCAACCGCTCTTCCAAGCATCGGATGATGAAGACGAAGAGAAGTGATTAGAAATTATTTC
 
. : . : . : . : . : . :
rJMFF008F06+ GAACTGTTCCCTGTTCCCGAGCTACTGATCCATTTGTTATCGTGAGCAGCGTAATTGGCT
rJMFF009A02+ GAACTGTTCCCTGTTCCCGAGCTACTGATCCATTTGTTATCGTGAGCAGCGTAATTGGCT
rJMSF010B14+ GAACTGTTCCCTGTTCCCGAGCTACTGATCCATTTGTTATCGTGAGCAGCGTAATTGGCT
                      ____________________________________________________________
consensus GAACTGTTCCCTGTTCCCGAGCTACTGATCCATTTGTTATCGTGAGCAGCGTAATTGGCT
 
. : . : . : . : . : . :
rJMFF008F06+ AATTGCTTCTGATCATTCTGCATATTGAGTGAATTTCTTGGATGAATTTGTTGCAGCTCA
rJMFF009A02+ AATTGCTTCTGATCATTCTGCATATTGAGTGAATTTCTTGGATGAATTTGTTGCAGCTCA
rJMSF010B14+ AATTGCTTCTGATCATTCTGCATATTGAGTGAATTTCTTGGATGAATTTGTTGCAGCTCA
                      ____________________________________________________________
consensus AATTGCTTCTGATCATTCTGCATATTGAGTGAATTTCTTGGATGAATTTGTTGCAGCTCA
 
. : . : . : . : . : . :
rJMFF008F06+ ACTATGTGGATTAGAGTGGAAAATGCATTTGTATGCTAGTCTTTATCAGGATAGTTGAAT
rJMFF009A02+ ACTATGTGGATTAGAGTGGAAAATGCATTTGTATGCTAGTCTTTATCAGGATAGTTGAAT
rJMSF010B14+ ACTATGTGGATTAGAGTGGAAAATGCATTTGTATGCTAGTCTTTATCAGGATAGTTGAAT
                      ____________________________________________________________
consensus ACTATGTGGATTAGAGTGGAAAATGCATTTGTATGCTAGTCTTTATCAGGATAGTTGAAT
 
. : . : . : . : . : . :
rJMFF008F06+ TGGAATTTGGTAACCATACAATACAAAGTACTTTTTGGGAACTTGATGCTCTTGATGTAA
rJMFF009A02+ TGGAATTTGGTAACCATACAATACAAAGTACTTTTTGGGAACTTGATGCTCTTGATGTAA
rJMSF010B14+ TGGAATTTGGTAACCATACAATACAAAGTACTTTTTGGGAACTTGATGCTCTTGATGTAA
                      ____________________________________________________________
consensus TGGAATTTGGTAACCATACAATACAAAGTACTTTTTGGGAACTTGATGCTCTTGATGTAA
 
. : . : . : . : . : . :
rJMFF008F06+ TCTTGTTCTAGTTTATGTAAATCAGATCAGGA
rJMFF009A02+ TCTTGTTCTAGTTTATGTAAATCAGATCAGGA
rJMSF010B14+ TCTTGTTCTAGTTTATGTAAATCAGATCAGGATGAAAATCCTGTTTCTTCAAATTCCCAA
                      ____________________________________________________________
consensus TCTTGTTCTAGTTTATGTAAATCAGATCAGGATGAAAATCCTGTTTCTTCAAATTCCCAA