Contig 005603:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF043H07+                        AATTGCGTGATCTTTGCTAGGTATTGTCAGATGAATCAACCAGAAC
                      ____________________________________________________________
consensus                           AATTGCGTGATCTTTGCTAGGTATTGTCAGATGAATCAACCAGAAC
 
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rJMSF043H07+          CCAATATGATAGGGCTCTCCAATATCAAGAAGACACGGGCAGGACAGTGGTGGGCAATTG
rJMSF007J09+                TGATAGGGCTCTCCAATATCAAGAAGACACGGNCAGGACAGTGGTGGGCAATTG
                      ____________________________________________________________
consensus             CCAATATGATAGGGCTCTCCAATATCAAGAAGACACGGGCAGGACAGTGGTGGGCAATTG
 
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rJMSF043H07+          GGATCACAACTTTGGATATGAAGATGAGTCAAGGACCTATAGGTGGGCTGAAGTCAGACG
rJMSF007J09+          GGATCACAACTTNGGATATGAAGATGAGTCAAGGACCTATAGGTGGGCTGAAGTCAGACG
                      ____________________________________________________________
consensus             GGATCACAACTTTGGATATGAAGATGAGTCAAGGACCTATAGGTGGGCTGAAGTCAGACG
 
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rJMSF043H07+          AAAAATGCAACAGGAGACATATTGGGAACAGTATCACAAGAAAGAAAATTTTTCTTTTTA
rJMSF007J09+          AAAAATGCAACAGGAGACATATTGGGAACAGTATCACAAGAAAGAAAATTTTTCTTTTTA
                      ____________________________________________________________
consensus             AAAAATGCAACAGGAGACATATTGGGAACAGTATCACAAGAAAGAAAATTTTTCTTTTTA
 
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rJMSF043H07+          TTATGAAACAGAGGATGGGTCAGATGAAGAAAGTCTTGATGAAGAAAGAGGTCCCTTTCT
rJMSF007J09+          TTATGAAACAGAGGATGGGTCAGATGAAGAAAGTCTTGATGAAGAAAGAGGTCCCTTTCT
                      ____________________________________________________________
consensus             TTATGAAACAGAGGATGGGTCAGATGAAGAAAGTCTTGATGAAGAAAGAGGTCCCTTTCT
 
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rJMSF043H07+          TGAAGTGCTTAGATCTGCCTTTCTCTCTCTGTTCCTAATGTACACAGTAGGCATTCGGCT
rJMSF007J09+          TGAAGTGCTTAGATCTGCCTTTCTCTCTCTGTTCCTAATGTACACAGTAGGCATTCGGCT
                      ____________________________________________________________
consensus             TGAAGTGCTTAGATCTGCCTTTCTCTCTCTGTTCCTAATGTACACAGTAGGCATTCGGCT
 
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rJMSF043H07+          ATCTTTGACGTTTAGTAGCCTTATGGCCTTGCTTGACCGGAAGTTGGATGCTGGATACAA
rJMSF007J09+          ATCTTTGACGTTTAGTAGCCTTATGGCCTTGCTTGACCGGAAGTTGGATGCTGGATACAA
                      ____________________________________________________________
consensus             ATCTTTGACGTTTAGTAGCCTTATGGCCTTGCTTGACCGGAAGTTGGATGCTGGATACAA
 
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rJMSF043H07+          AATAGGTTATGTGCTTGCTTGGGTACTGGGAGGCCGAGGTGGCATTTTACTTACATTATG
rJMSF007J09+          AATAGGTTATGTGCTTGCTTGGGTACTGGGAGGCCGAGGTGGCATTTTACTTACATTATG
                      ____________________________________________________________
consensus             AATAGGTTATGTGCTTGCTTGGGTACTGGGAGGCCGAGGTGGCATTTTACTTACATTATG
 
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rJMSF043H07+          CCTTTTGTTTGCAAGTTGGCTGTGCGGAAAAACCAGCAGCAGCGTAGTCGTTCTGGTGGT
rJMSF007J09+          CCTTTTGTTTGCAAGTTGGCTGTGCGGAAAAACCAGCAGCAGCGTAGTCGTTCTGGTGGT
                      ____________________________________________________________
consensus             CCTTTTGTTTGCAAGTTGGCTGTGCGGAAAAACCAGCAGCAGCGTAGTCGTTCTGGTGGT
 
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rJMSF043H07+          CGTAGCCATGTGGATTGGTTCAAATCTTGCAAGGTTTGCTCCGCTTCCGCAAGGTGCTAT
rJMSF007J09+          CGTAGCCATGTGGATTGGTTCAAATCTTGCAAGGTTTGCTCCGCTTCCGCAAGGTGCTAT
                      ____________________________________________________________
consensus             CGTAGCCATGTGGATTGGTTCAAATCTTGCAAGGTTTGCTCCGCTTCCGCAAGGTGCTAT
 
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rJMSF043H07+          TCTTACCCTCTTGTACATGTCAATCAAGTTACAAGTTGATCTGAACTAAATCCACACTGA
rJMSF007J09+          TCTTACCCTCTTGTACATGTCAATCAAGTTACAAGTTGATCTGAACTAAATCCACACTGA
                      ____________________________________________________________
consensus             TCTTACCCTCTTGTACATGTCAATCAAGTTACAAGTTGATCTGAACTAAATCCACACTGA
 
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rJMSF043H07+          CACTGCTGTCTGAGTTTATGTCTGTAAATATGTTGATGTCTTGCCTTGTATTGTATAAGA
rJMSF007J09+          CACTGCTGTCTGAGTTTATGTCTGTAAATATGTTGATGTCTTGCCTTGTATTGTATAAGA
                      ____________________________________________________________
consensus             CACTGCTGTCTGAGTTTATGTCTGTAAATATGTTGATGTCTTGCCTTGTATTGTATAAGA
 
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rJMSF043H07+          AGGAAATAAGATAATTGTCTAGTGTAAATTCATGTCTTGGGTGTAGTCTCCACTCTCCAT
rJMSF007J09+          AGGAAATAAGATAATTGTCTAGTGTAAATTCATGTCTTGGGTGTAGTCTCCACTCTCCAT
                      ____________________________________________________________
consensus             AGGAAATAAGATAATTGTCTAGTGTAAATTCATGTCTTGGGTGTAGTCTCCACTCTCCAT
 
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rJMSF043H07+          TTCCTTCTGT                                                  
rJMSF007J09+          TTCCTTCTGTTCACCTCTTTGAATAAATTGGAAAATTTATTCTTATTCTCAAACATTTTG
                      ____________________________________________________________
consensus             TTCCTTCTGTTCACCTCTTTGAATAAATTGGAAAATTTATTCTTATTCTCAAACATTTTG