Contig 005595:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002H22Sequence321013226 (5)ref|XP_011082747.1|9e-32PREDICTED: tRNA dimethylallyltransferase 9 [Sesamum indicum]755005595 (5)ref|XP_004294141.2|8e-66PREDICTED: tRNA dimethylallyltransferase 9 [Fragaria vesca subsp. vesca]
JMSF005D13Sequence335013226 (5)ref|XP_011082747.1|2e-34PREDICTED: tRNA dimethylallyltransferase 9 [Sesamum indicum]334005595 (5)
JMSF008L03Sequence364013226 (5)ref|XP_011082747.1|4e-46PREDICTED: tRNA dimethylallyltransferase 9 [Sesamum indicum]755005595 (5)ref|XP_004294141.2|5e-75PREDICTED: tRNA dimethylallyltransferase 9 [Fragaria vesca subsp. vesca]
JMSF038G09Sequence656013226 (5)ref|XP_011082747.1|7e-45PREDICTED: tRNA dimethylallyltransferase 9 [Sesamum indicum]881005595 (5)ref|XP_009587099.1|7e-94PREDICTED: tRNA dimethylallyltransferase 9 [Nicotiana tomentosiformis]
JMSF042D18Sequence159013226 (5)709005595 (5)ref|XP_004294141.2|5e-68PREDICTED: tRNA dimethylallyltransferase 9 [Fragaria vesca subsp. vesca]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF038G09+ GGTGTAACAGATACTTCTGACATTAGTTCTTCCAC
                      ____________________________________________________________
consensus GGTGTAACAGATACTTCTGACATTAGTTCTTCCAC
 
. : . : . : . : . : . :
rJMSF038G09+ TGATGGGCTTCAGCAGAGTAAAGAAAAGGATTTGGACTATGACTTCCTCTGTGTATTTCT
                      ____________________________________________________________
consensus TGATGGGCTTCAGCAGAGTAAAGAAAAGGATTTGGACTATGACTTCCTCTGTGTATTTCT
 
. : . : . : . : . : . :
rJMSF038G09+ TACTACCCAGAGGCTAGATCTCTATAGATCAATTGATTTCCGGTGTGAAGATATGCTCTT
rJMSF008L03+ GAAGATATGCTCTT
                      ____________________________________________________________
consensus TACTACCCAGAGGCTAGATCTCTATAGATCAATTGATTTCCGGTGTGAAGATATGCTCTT
 
. : . : . : . : . : . :
rJMSF038G09+ AGAAAATTATGGAGTTCTGTCTGAGGCTAGGGGGCTTCTTGATTT-GGGTCTTCTGCCAA
rJMSF008L03+ AGAAAATTATGGAGTTCTGTCTGAGGCTAGGGGGCTTCTTGATTT-GGGTCTTCTGCCAA
rJMSF042D18+ GGGTCTTCTGCCAA
rJMSF002H22+ GCTAGGGGGCTTCTTGATTTNGGGTCTTCTGCCAA
                      ____________________________________________________________
consensus AGAAAATTATGGAGTTCTGTCTGAGGCTAGGGGGCTTCTTGATTT-GGGTCTTCTGCCAA
 
. : . : . : . : . : . :
rJMSF038G09+ ACTCAAATTCTGCAAGTCGAGCTATTGGTTATCGGCAAGCTATGGAATACCTCCTGTACT
rJMSF008L03+ ACTCAAATTCTGCAAGTCGAGCTATTGGTTATCGGCAAGCTATGGAATACCTCCTGTACT
rJMSF042D18+ ACTCAAATTCTGCAAGTCGAGCTATTGGTTATCGGCAAGCTATGGAATACCTCCTGTACT
rJMSF002H22+ ACTCAAATTCTGCAAGTCGAGCTATTGGTTATCGGCAAGCTATGGAATACCTCCTGTACT
                      ____________________________________________________________
consensus ACTCAAATTCTGCAAGTCGAGCTATTGGTTATCGGCAAGCTATGGAATACCTCCTGTACT
 
. : . : . : . : . : . :
rJMSF038G09+ GCAGAGAACAAGGGGGTTCTAGTTCTCCAAGGGACTTTTTTGCCTTTCTGTCTGAATTCC
rJMSF008L03+ GCAGAGAACAAGGGGGTTCTAGTTCTCCAAGGGACTTTTTTGCCTTTCTGTCTGAATTCC
rJMSF042D18+ GCAGAGAACAAGGGGGTTCTAGTTCTCCAAGGGACTTTTTTGCCTTTCTGTCTGAATTCC
rJMSF002H22+ GCAGAGAACAAGGGGGTTCTAGTTCTCCAAGGGACTTTTTTGCCTTTCTGTCTGAATTCC
                      ____________________________________________________________
consensus GCAGAGAACAAGGGGGTTCTAGTTCTCCAAGGGACTTTTTTGCCTTTCTGTCTGAATTCC
 
. : . : . : . : . : . :
rJMSF038G09+ AGAAAGCATCCAGAAATTTTGCTAAAAGGCAGCTAACATGGTTCCGTAATGAACCACTTT
rJMSF008L03+ AGAAAGCATCCAGAAATTTTGCTAAAAGGCAGCTAACATGGTTCCGTAATGAACCACTTT
rJMSF042D18+ AGAAAGCATCCAGAAATTTTGCTAAAAGGCAGCTAACATGGTTCCGTAATGAACCACTTT
rJMSF002H22+ AGAAAGCATCCAGAAATTTTGCTAAAAGGCAGCTAACATGGTTCCGTAATGAACCACTTT
                      ____________________________________________________________
consensus AGAAAGCATCCAGAAATTTTGCTAAAAGGCAGCTAACATGGTTCCGTAATGAACCACTTT
 
. : . : . : . : . : . :
rJMSF038G09+ ATCACTGGATTGATGCTTCTAGACCCATGGGAAGTGTGCTTGACTTCATCTATGATTCAT
rJMSF008L03+ ATCACTGGATTGATGCTTCTAGACCCATGGGAAGTGTGCTTGACTTCATCTATGATTCAT
rJMSF042D18+ ATCACTGGATTGATGCTTCTAGACCCATGGGAAGTGTGCTTGACTTCATCTATGATTCAT
rJMSF002H22+ ATCACTGGATTGATGCTTCTAGACCCATGGGAAGTGTGCTTGACTTCATCTATGATTCAT
                      ____________________________________________________________
consensus ATCACTGGATTGATGCTTCTAGACCCATGGGAAGTGTGCTTGACTTCATCTATGATTCAT
 
. : . : . : . : . : . :
rJMSF038G09+ ATCATAGTCAATCTGGTCATTTGAAGGTTCCTAAATCTCTTTCTGTGAAGAAAGAAATTT
rJMSF008L03+ ATCATAGTCAATCTGGTCATTTGAAGGTTCCTAAATCTCTTTCTGTGAAGAAAGAAATTT
rJMSF042D18+ ATCATAGTCAATCTGGTCATTTGAAGGTTCCTAAATCTCTTTCTGTGAAGAAAGAAATTT
rJMSF002H22+ ATCATAGTCAATCTGGTCATTTGAAGGTTCCTAAATCTCTTTCTGTGAAGAAAGAAATTT
                      ____________________________________________________________
consensus ATCATAGTCAATCTGGTCATTTGAAGGTTCCTAAATCTCTTTCTGTGAAGAAAGAAATTT
 
. : . : . : . : . : . :
rJMSF038G09+ CAAGCCGACGTGAAGTTGCAGAAATGAAAACCTATCGCCCTAGAAACCAGCACTTCATCG
rJMSF008L03+ CAAGCCGACGTGAAGTTGCAGAAATGAAAACCTATCGCCCTAGAAACCAGCACTTCATCG
rJMSF042D18+ CAAGCCGACGTGAAGTTGCAGAAATGAAAACCTATCGCCCTAGAAACCAGCACTTCATCG
rJMSF005D13+ CTAGAAACCAGCANTTCATCG
rJMSF002H22+ CAAGCCGACGTGAAGTTGCAGAAATGAAAACCTATCGCCCTAGAAACCAGCACTTCATCG
                      ____________________________________________________________
consensus CAAGCCGACGTGAAGTTGCAGAAATGAAAACCTATCGCCCTAGAAACCAGCACTTCATCG
 
. : . : . : . : . : . :
rJMSF038G09+ GGCGTGAGGATTGCACCCCTGTTCTAAACTGGATTCAGAGCATTTATGCGCGAGAAGCTG
rJMSF008L03+ GGCGTGAGGATTGCACCCCTGTTCTAAACTGGATTCAGAGCATTTATGCGCGAGAAGCTG
rJMSF042D18+ GGCGTGAGGATTGCACCCCTGTTCTAAACTGGATTCAGAGCATTTATGCGCGAGAAGCTG
rJMSF005D13+ GGCGTGAGGATTGCACNCCTGTTGTAANCTGGATTCAGAGCATTTATGCGCGAGAAGCTG
rJMSF002H22+ GGCGTGAGGATTGCACCCCTGTTCTAAACTGGATTCAGAGCATTTATGCGCGAGAAGCTG
                      ____________________________________________________________
consensus GGCGTGAGGATTGCACCCCTGTTCTAAACTGGATTCAGAGCATTTATGCGCGAGAAGCTG
 
. : . : . : . : . : . :
rJMSF038G09+ CATCTATTTCTTGAATTGCAGCCAGCGGCCTCCTCTTGATGTCATTGAGTCCAAAACATC
rJMSF008L03+ CATCTATTTCTTGAATTGCAGCCAGCGGCCTCCTCTTGATGTCATTGAGTCCAAAACATC
rJMSF042D18+ CATCTATTTCTTGAATTGCAGCCAGCGGCCTCCTCTTGATGTCATTGAGTCCAAAACATC
rJMSF005D13+ CATNTATTTCTTGAATTGCAGCCAGCGGCCTCCTCTTGATGTCATTGAGTCCAAAACATC
rJMSF002H22+ CATCTATTTCTTGAATTGCAGCCAGCGGCCTCCTCTTGATGTCATTGAGTCCAAAACATC
                      ____________________________________________________________
consensus CATCTATTTCTTGAATTGCAGCCAGCGGCCTCCTCTTGATGTCATTGAGTCCAAAACATC
 
. : . : . : . : . : . :
rJMSF038G09+ AATTGTTCACTCGCTCATGAAGTGATCTCAGACAACAATGAAAAAATGCCATAAGAGAGT
rJMSF008L03+ AATTGTTCACTCGCTCATGAAGTGATCTCAGACAACAATGAAAAAATGCCATAAGAGAGT
rJMSF042D18+ AATTGTTCACTCGCTCATGAAGTGATCTCAGACAACAATGAAAAAATGCCATAAGAGAGT
rJMSF005D13+ AATTGTTCACTCGCTCATGAAGTGATCTCAGACAACAATGAAAAAANGCCATAAGAGAGT
rJMSF002H22+ AATTGTTCACTCGCTCATGAAGTGATCTCAGACAACAATGAAAAAATGCCATAAGAGAGT
                      ____________________________________________________________
consensus AATTGTTCACTCGCTCATGAAGTGATCTCAGACAACAATGAAAAAATGCCATAAGAGAGT
 
. : . : . : . : . : . :
rJMSF038G09+ GAATCTTAGGAGCCAGATAGAATGGACTGCCAGTAAAACTGCCCACCCCGCGAGTTTAGT
rJMSF008L03+ GAATCTTAGGAGCCAGATAGAATGGACTGCCAGTAAAACTGCCCACCCCGCGAGTTTAGT
rJMSF042D18+ GAATCTTAGGAGCCAGATAGAATGGACTGCCAGTAAAACTGCCCACCCCGCGAGTTTAGT
rJMSF005D13+ GAATCGTAGGAGCCAGATAGAATGGACTGCCAGTAAAACTGCCCACCCCGCGAGTTTAGT
rJMSF002H22+ GAATCTTAGGAGCCAGATAGAATGGACTGCCAGTAAAACTGCCCACCCCGCGAGTTTAGT
                      ____________________________________________________________
consensus GAATCTTAGGAGCCAGATAGAATGGACTGCCAGTAAAACTGCCCACCCCGCGAGTTTAGT
 
. : . : . : . : . : . :
rJMSF038G09+ TTGTTTAGTTCTGTACTGTATAATATGGATTACTGTATAGGAGATAGGATATGTTCCATA
rJMSF008L03+ TTGTTTAGTTCTGTACTGTATAATATGGATTACTGTATAGGAGATAGGATATGTTCCATA
rJMSF042D18+ TTGTTTAGTTCTGTACTGTATAATATGGATTACTGTATAGGAGATAGGATATGTTCCATA
rJMSF005D13+ TTGTTTAGTTCTGTACTGTATAATATGGANTACNGTATAGGAGATNGGATATGTTCCATA
rJMSF002H22+ TTGTTTAGTTCTGTACTGTATAATATGGATTACTGTATAGGAGATAGGATATGTTCCATA
                      ____________________________________________________________
consensus TTGTTTAGTTCTGTACTGTATAATATGGATTACTGTATAGGAGATAGGATATGTTCCATA
 
. : . : . : . : . : . :
rJMSF038G09+ CTTCCAT
rJMSF008L03+ CTTCCATTGCTTCTACTTCTTA
rJMSF042D18+ CTTCCATTGCTTCTACTTCTTA
rJMSF005D13+ CTTCCATTGCTTC
rJMSF002H22+ CTTCCATTGCTTCTACTTCTTACATTGTGCAGTGCAGCATCCCCTCATCCCAAAAAAGAT
                      ____________________________________________________________
consensus CTTCCATTGCTTCTACTTCTTACATTGTGCAGTGCAGCATCCCCTCATCCCAAAAAAGAT