| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF031C02 | Sequence | 601 | 009297 (5) | ref|XP_006347534.1| | 7e-68 | PREDICTED: stomatin-like protein 2, mitochondrial-like [Solanum tuberosum] | 727 | 005581 (5) | ref|XP_009629937.1| | 5e-56 | PREDICTED: stomatin-like protein 2, mitochondrial [Nicotiana tomentosiformis] |
| JMFF051O20 | Sequence | 623 | 009297 (5) | ref|XP_006347534.1| | 1e-69 | PREDICTED: stomatin-like protein 2, mitochondrial-like [Solanum tuberosum] | 488 | 005581 (5) | ref|XP_009629937.1| | 3e-04 | PREDICTED: stomatin-like protein 2, mitochondrial [Nicotiana tomentosiformis] |
| JMSF002O24 | Sequence | 337 | 009297 (5) | ref|XP_006347534.1| | 1e-14 | PREDICTED: stomatin-like protein 2, mitochondrial-like [Solanum tuberosum] | 749 | 005581 (5) | ref|XP_009629937.1| | 2e-71 | PREDICTED: stomatin-like protein 2, mitochondrial [Nicotiana tomentosiformis] |
| JMSF020L11 | Sequence | 720 | 009297 (5) | ref|XP_011075869.1| | 2e-76 | PREDICTED: stomatin-like protein 2, mitochondrial [Sesamum indicum] ref|XP_01107 | 809 | 005581 (5) | ref|XP_009629937.1| | 3e-70 | PREDICTED: stomatin-like protein 2, mitochondrial [Nicotiana tomentosiformis] |
| JMSF029D12 | Sequence | 678 | 009297 (5) | ref|XP_006347534.1| | 4e-98 | PREDICTED: stomatin-like protein 2, mitochondrial-like [Solanum tuberosum] | 764 | 005581 (5) | ref|XP_009629937.1| | 3e-69 | PREDICTED: stomatin-like protein 2, mitochondrial [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMSF020L11+ GGGGTTAGGGC
____________________________________________________________
consensus GGGGTTAGGGC
. : . : . : . : . : . :
rJMSF029D12+ AAAGGGCTCAAGTTCTGGNATCAG
rJMSF002O24+ CTATGGAGATGCAAGCAGAAGCTGAACGTAAGGAAAAGGGCTCAAGTTCTGGAATCAG
rJMSF020L11+ AGCTATGGAGATGCAAGCAGAAGCTGGACGTAAG--AAAGGGCTCAAGTTCTGGAATCAG
____________________________________________________________
consensus AGCTATGGAGATGCAAGCAGAAGCTGGACGTAAGGAAAAGGGCTCAAGTTCTGGAATCAG
. : . : . : . : . : . :
rJMSF029D12+ AAGGAGAAAGGCAAGCAAATATTAACATTGCTGATGGAAGGAAAAATGCCGTGATCCTTG
rJMSF002O24+ AAGGAGAAAGGCAAGCAAATATTAACATTGCTGATGGAAGGAAAAATGCCGTGATCCTTG
rJMSF020L11+ AAGGAGAAAGGCAAGCAAATATTAACATTGCTGATGGAAGGAAAAATGCCGTGATCCTTG
rJMFF031C02+ TGGAAGGAAAAATGCCGTGATCCTTG
____________________________________________________________
consensus AAGGAGAAAGGCAAGCAAATATTAACATTGCTGATGGAAGGAAAAATGCCGTGATCCTTG
. : . : . : . : . : . :
rJMSF029D12+ AATCAGAAGCAGCAAAAATGGACCAGATTAACAGAGCTCAAGGTGAAGCTGAGGCCATTC
rJMSF002O24+ AATCAGAAGCAGCAAAAATGGACCAGATTAACAGAGCTCAAGGTGAAGCTGAGGCCATTC
rJMSF020L11+ AATCAGAAGCAGCAAAAATGGACCAGATTAACAGAGCTCAAGGTGAAGCTGAGGCCATTC
rJMFF031C02+ AATCAGAAGCAGCAAAAATGGACCAGATTAACAGAGCTCAAGGTGAAGCTGAGGCCATTC
____________________________________________________________
consensus AATCAGAAGCAGCAAAAATGGACCAGATTAACAGAGCTCAAGGTGAAGCTGAGGCCATTC
. : . : . : . : . : . :
rJMSF029D12+ TTGCCAAAGCACAAGCTACAGCAAAAGGAATTGTTATGGTTTCTCAATCTCTCAAGGAAC
rJMSF002O24+ TTGCCAAAGCACAAGCTACAGCAAAAGGAATTGTTATGGTTTCTCAATCTCTCAAGGAAC
rJMSF020L11+ TTGCCAAAGCACAAGCTACAGCAAAAGGAATTGTTATGGTTTCTCAATCTCTCAAGGAAC
rJMFF031C02+ TTGCCAAAGCACAAGCTACAGCAAAAGGAATTGTTATGGTTTCTCAATCTCTCAAGGAAC
____________________________________________________________
consensus TTGCCAAAGCACAAGCTACAGCAAAAGGAATTGTTATGGTTTCTCAATCTCTCAAGGAAC
. : . : . : . : . : . :
rJMSF029D12+ ACGAGGGTTCTGAGGCAGCAAATCTTAGAATTGCTGAGCAGTACATTCAAGCCTTCGGCA
rJMSF002O24+ ACGAGGGTTCTGAGGCAGCAAATCTTAGAATTGCTGAGCAGTACATTCAAGCCTTCGGCA
rJMSF020L11+ ACGAGGGTTCTGAGGCAGCAAATCTTAGAATTGCTGAGCAGTACATTCAAGCCTTCGGCA
rJMFF031C02+ ACGAGGGTTCTGAGGCAGCAAATCTTAGAATTGCTGAGCAGTACATTCAAGCCTTCGGCA
____________________________________________________________
consensus ACGAGGGTTCTGAGGCAGCAAATCTTAGAATTGCTGAGCAGTACATTCAAGCCTTCGGCA
. : . : . : . : . : . :
rJMSF029D12+ ACATCGCAAAGGAGGGCACAACACTATTGCTTCCAACGAGTGCTTCTGATCCTGCCAGTA
rJMSF002O24+ ACATCGCAAAGGAGGGCACAACACTATTGCTTCCAACGAGTGCTTCTGATCCTGCCAGTA
rJMSF020L11+ ACATCGCAAAGGAGGGCACAACACTATTGCTTCCAACGAGTGCTTCTGATCCTGCCAGTA
rJMFF031C02+ ACATCGCAAAGGAGGGCACAACACTATTGCTTCCAACGAGTGCTTCTGATCCTGCCAGTA
rJMFF051O20+ TGCCAGTA
____________________________________________________________
consensus ACATCGCAAAGGAGGGCACAACACTATTGCTTCCAACGAGTGCTTCTGATCCTGCCAGTA
. : . : . : . : . : . :
rJMSF029D12+ TGATTGCTCAAGCTCTGAATATCTACAAAGGCTTAGCAACCAAGAATTCTAGCAGTGGAT
rJMSF002O24+ TGATTGCTCAAGCTCTGAATATCTACAAAGGCTTAGCAACCAAGAATTCTAGCAGTGGAT
rJMSF020L11+ TGATTGCTCAAGCTCTGAATATCTACAAAGGCTTAGCAACCAAGAATTCTAGCAGTGGAT
rJMFF031C02+ TGATTGCTCAAGCTCTGAATATCTACAAAGGCTTAGCAACCAAGAATTCTAGCAGTGGAT
rJMFF051O20+ TGATTGCTCAAGCTCTGAATATCTACAAAGGCTTAGCAACCAAGAATTCTAGCAGTGGAT
____________________________________________________________
consensus TGATTGCTCAAGCTCTGAATATCTACAAAGGCTTAGCAACCAAGAATTCTAGCAGTGGAT
. : . : . : . : . : . :
rJMSF029D12+ CTACCAAGGTCTCAGCCAAACAGAATGTTTCAACTGGATCCCTCGACGACCAGAACTCCA
rJMSF002O24+ CTACCAAGGTCTCAGCCAAACAGAATGTTTCAACTGGATCCCTCGACGACCAGAACTCCA
rJMSF020L11+ CTACCAAGGTCTCAGCCAAACAGAATGTTTCAACTGGATCCCTCGACGACCAGAACTCCA
rJMFF031C02+ CTACCAAGGTCTCAGCCAAACAGAATGTTTCAACTGGATCCCTCGACGACCAGAACTCCA
rJMFF051O20+ CTACCAAGGTCTCAGCCAAACAGAATGTTTCAACTGGATCCCTCGACGACCAGAACTCCA
____________________________________________________________
consensus CTACCAAGGTCTCAGCCAAACAGAATGTTTCAACTGGATCCCTCGACGACCAGAACTCCA
. : . : . : . : . : . :
rJMSF029D12+ CTACTCCTATATCCAACGATGAAGATCAAGCAAGTGACCCTGTTTTCTCACTACAAACCC
rJMSF002O24+ CTACTCCTATATCCAACGATGAAGATCAAGCAAGTGACCCTGTTTTCTCACTACAAACCC
rJMSF020L11+ CTACTCCTATATCCAACGATGAAGATCAAGCAAGTGACCCTGTTTTCTCACTACAAACCC
rJMFF031C02+ CTACTCCTATATCCAACGATGAAGATCAAGCAAGTGACCCTGTTTTCTCACTACAAACCC
rJMFF051O20+ CTACTCCTATATCCAACGATGAAGATCAAGCAAGTGACCCTGTTTTCTCACTACAAACCC
____________________________________________________________
consensus CTACTCCTATATCCAACGATGAAGATCAAGCAAGTGACCCTGTTTTCTCACTACAAACCC
. : . : . : . : . : . :
rJMSF029D12+ CCAAGCACAAAGATTAAGTGTGACAGACCCTCCTTCCCTGGTTCATTAGCCAAATTTTTA
rJMSF002O24+ CCAAGCACAAAGATTAAGTGTGACAGACCCTCCTTCCCTGGTTCATTAGCCAAATTTTTA
rJMSF020L11+ CCAAGCACAAAGATTAAGTGTGACAGACCCTCCTTCCCTGGTTCATTAGCCAAATTTTTA
rJMFF031C02+ CCAAGCACAAAGATTAAGTGTGACAGACCCTCCTTCCCTGGTTCATTAGCCAAATTTTTA
rJMFF051O20+ CCAAGCACAAAGATTAAGTGTGACAGACCCTCCTTCCCTGGTTCATTAGCCAAATTTTTA
____________________________________________________________
consensus CCAAGCACAAAGATTAAGTGTGACAGACCCTCCTTCCCTGGTTCATTAGCCAAATTTTTA
. : . : . : . : . : . :
rJMSF029D12+ GCCTTAGTATTCTTGTTAAGGTGAATGTGGATCAAAGATTGACGATAGAATGAGTGTTCT
rJMSF002O24+ GCCTTAGTATTCTTGTTAAGGTGAATGTGGATCAAAGATTGACGATAGAATGAGTGTTCT
rJMSF020L11+ GCCTTAGTATTCTTGTTAAGGTGAATGTGGATCAAAGATTGACGATAGAATGAGTGTTCT
rJMFF031C02+ GCCTTAGTATTCTTGTTAAGGTGAATGTGGATCAAAGATTGACGATAGAATGAGTGTTCT
rJMFF051O20+ GCCTTAGTATTCTTGTTAAGGTGAATGTGGATCAAAGATTGACGATAGAATGAGTGTTCT
____________________________________________________________
consensus GCCTTAGTATTCTTGTTAAGGTGAATGTGGATCAAAGATTGACGATAGAATGAGTGTTCT
. : . : . : . : . : . :
rJMSF029D12+ TTTTGTAGTCATAAAACAAGAAAGCGTTTTGGCCCATCATCACATCATACATCTCGCAGA
rJMSF002O24+ TTTTGTAGTCATAAAACAAGAAAGCGTTTTGGCCCATCATCACATCATACATCTCGCAGA
rJMSF020L11+ TTTTGTAGTCATAAAACAAGAAAGCGTTTTGGCCCATCATCACATCATACATCTCGCAGA
rJMFF031C02+ TTTTGTAGTCATAAAACAAGAAAGCGTTTTGGCCCATCATCACATCATACATCTCGCAGA
rJMFF051O20+ TTTTGTAGTCATAAAACAAGAAAGCGTTTTGGCCCATCATCACATCATACATCTCGCAGA
____________________________________________________________
consensus TTTTGTAGTCATAAAACAAGAAAGCGTTTTGGCCCATCATCACATCATACATCTCGCAGA
. : . : . : . : . : . :
rJMSF029D12+ AACATACTGACTTTTTGCAATTACCCAAACTTCTGACAGAGTTTCAAATTCACTTGATTG
rJMSF002O24+ AACATACTGACTTTTTGCAATTACCCAAACT
rJMSF020L11+ AACATACTGACTTTTTGCAATTACCCAAACTTCTGACAGAGTTTCAAATTCACTTGATTG
rJMFF031C02+ AACATACTGACTTTTTGCAATTACCCAAACTTCTGACAGAGTTTCAAATTCACTTGATTG
rJMFF051O20+ AACATACTGACTTTTTGCAATTACCCAAACTTCTGACAGAGTTTCAAATTCACTTGATTG
____________________________________________________________
consensus AACATACTGACTTTTTGCAATTACCCAAACTTCTGACAGAGTTTCAAATTCACTTGATTG
. : . : . : . : . : . :
rJMSF029D12+ TAGTTGTCATCCTAAGAATA
rJMSF020L11+ TAGTTGTCATCCTAAGAATA
rJMFF031C02+ TAGTTGTCATCCTAAGAATATTTTCCTTCGAAT
rJMFF051O20+ TAGTTGTCATCCTAAGAATATTTTCCTTCGAATTGAAAGAATAGTACTCTTTAATTGACC
____________________________________________________________
consensus TAGTTGTCATCCTAAGAATATTTTCCTTCGAATTGAAAGAATAGTACTCTTTAATTGACC