Contig 005580:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF051O02Sequence637000302 (2)ref|XP_010463941.1|1e-55PREDICTED: tryptophan--tRNA ligase, cytoplasmic-like [Camelina sativa]556005580 (2)ref|XP_008788272.1|1e-58PREDICTED: tryptophan--tRNA ligase, cytoplasmic-like [Phoenix dactylifera]
JMSF048M15Sequence651000302 (2)ref|XP_006408175.1|2e-117hypothetical protein EUTSA_v10020864mg [Eutrema salsugineum] gb|ESQ49628.1| hypo699005580 (2)ref|XP_011074471.1|280PREDICTED: tryptophan--tRNA ligase, cytoplasmic [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF048M15+ ATTTCCGAATGACACGAGACGTTGCTCCTCGAATAGGCTATCATAAGCCTGCT
                      ____________________________________________________________
consensus ATTTCCGAATGACACGAGACGTTGCTCCTCGAATAGGCTATCATAAGCCTGCT
 
. : . : . : . : . : . :
rJMSF048M15+ TTAATTGAATCATCGTTCTTTCCTGCTCTACAGGGTGAGACGGGAAAAATGTCTGCTAGT
                      ____________________________________________________________
consensus TTAATTGAATCATCGTTCTTTCCTGCTCTACAGGGTGAGACGGGAAAAATGTCTGCTAGT
 
. : . : . : . : . : . :
rJMSF048M15+ GATCCAAATTCTGCAATATACGTGACAGATTCTGCAAAAGACATTAAAAATAAGATAAAC
rJMFF051O02+ TAAAAATAAGATAANC
                      ____________________________________________________________
consensus GATCCAAATTCTGCAATATACGTGACAGATTCTGCAAAAGACATTAAAAATAAGATAAAC
 
. : . : . : . : . : . :
rJMSF048M15+ AGATATGCATTTTCTGGTGGGCAAGATTCTATAGAATTGCACAGGAAATACGGAGCTAAC
rJMFF051O02+ AGATATGCATTTTCTGGTGGGCAAGATTCTATAGAATTGCACAGGAAATACGGAGCTAAC
                      ____________________________________________________________
consensus AGATATGCATTTTCTGGTGGGCAAGATTCTATAGAATTGCACAGGAAATACGGAGCTAAC
 
. : . : . : . : . : . :
rJMSF048M15+ CTTGAGGTTGATATACCAATCAAATACCTGGGATTTTTCCTGGAGGATGATGCAGAACTG
rJMFF051O02+ CTGNAGGTTGATATACCAATCAAATACCTGGGATTTTTCCTGGATGATGATGCAGAACTG
                      ____________________________________________________________
consensus CTTGAGGTTGATATACCAATCAAATACCTGGGATTTTTCCTGGATGATGATGCAGAACTG
 
. : . : . : . : . : . :
rJMSF048M15+ GAGCACATTAGAAAGGAATATGGGGCTGGGCGTATGCTGACAGGTGAAGTCAAGAAGCGG
rJMFF051O02+ GAGCACATTAGAAAGGAATATGGGGCTGGGCGTATGCTGACAGGTGAAGTCAAGAAGAGG
                      ____________________________________________________________
consensus GAGCACATTAGAAAGGAATATGGGGCTGGGCGTATGCTGACAGGTGAAGTCAAGAAGCGG
 
. : . : . : . : . : . :
rJMSF048M15+ CTTATTGAAGTTATAACAGAGGTTGTTGAAAGACATAGGCGAGCGAGGGCAGCAGTTACT
rJMFF051O02+ CTTATTGAAGTTATAACAGAGGTTGTTGAAAGACATAGGCAAGCGAGGGCAGCAGTTACT
                      ____________________________________________________________
consensus CTTATTGAAGTTATAACAGAGGTTGTTGAAAGACATAGGCGAGCGAGGGCAGCAGTTACT
 
. : . : . : . : . : . :
rJMSF048M15+ GACGAGATGGTAGATGCGTTCATGGCTGTACGCCCACTTCCAAATATGTTTTGCTGAACT
rJMFF051O02+ GATGAGATGGTAGATGCATTCATGGCTGTACGCCCACTTCCAAATATGTTTTGCTGAACT
                      ____________________________________________________________
consensus GATGAGATGGTAGATGCGTTCATGGCTGTACGCCCACTTCCAAATATGTTTTGCTGAACT
 
. : . : . : . : . : . :
rJMSF048M15+ AACTTTCATGAGTTCTGGGT
rJMFF051O02+ AACTTTCATCAGTTCTGGGTACATGTGATGAAGAGGCAGAGATAGAATATGATTTTACTA
                      ____________________________________________________________
consensus AACTTTCATGAGTTCTGGGTACATGTGATGAAGAGGCAGAGATAGAATATGATTTTACTA
 
. : . : . : . : . : . :
rJMFF051O02+ GAGACTAGAGACTAGAGAGAGAAGAGTGATTTGGATTTGGAAATTACCCACCCATGCATG
                      ____________________________________________________________
consensus GAGACTAGAGACTAGAGAGAGAAGAGTGATTTGGATTTGGAAATTACCCACCCATGCATG
 
. : . : . : . : . : . :
rJMFF051O02+ TTATGCAAATTATATTAACTACTGAGACTCGAAATTTCTTTCCTTGGTGTTGGGGAATTT
                      ____________________________________________________________
consensus TTATGCAAATTATATTAACTACTGAGACTCGAAATTTCTTTCCTTGGTGTTGGGGAATTT
 
. : . : . : . : . : . :
rJMFF051O02+ TGTGGTGATATGCTCATTTATAATTATATAGACAAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus TGTGGTGATATGCTCATTTATAATTATATAGACAAAAAAAAAAAAAAAACTCTCCAGGGT