Contig 005574:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF027F15Sequence520010599 (2)emb|CDO96633.1|4e-55spermine synthase [Ipomoea batatas]793005574 (3)emb|CDO96633.1|3e-113spermine synthase [Ipomoea batatas]
JMFF051F24Sequence526005574 (3)ref|XP_010671488.1|4e-27PREDICTED: spermine synthase isoform X2 [Beta vulgaris subsp. vulgaris]
JMSF010A18Sequence225010599 (2)763005574 (3)emb|CDO96633.1|1e-111spermine synthase [Ipomoea batatas]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF010A18+ CATTTGTGAGATAGACAAAATGGTTATA
                      ____________________________________________________________
consensus CATTTGTGAGATAGACAAAATGGTTATA
 
. : . : . : . : . : . :
rJMSF010A18+ GATGTTAGCAAAAAATTCTTTCCAGAGTTAGCTGTCGGCTTTGAGGACCCCCGAGT-CAA
rJMFF027F15+ TTTCCAGAGTTAGCTGTCGGCTTTGAGGACCCCCGAGTCCAA
                      ____________________________________________________________
consensus GATGTTAGCAAAAAATTCTTTCCAGAGTTAGCTGTCGGCTTTGAGGACCCCCGAGTCCAA
 
. : . : . : . : . : . :
rJMSF010A18+ ACTTCATGTTGGTGATGCTGTGGATTTTTTAAGGCATGCCCCTGAAGGAAAGTATGATGC
rJMFF027F15+ ACTTCATGTTGGTGATGCTGTGGATTTTTTAAGGCATGCCCCTGAAGGAAAGTATGATGC
                      ____________________________________________________________
consensus ACTTCATGTTGGTGATGCTGTGGATTTTTTAAGGCATGCCCCTGAAGGAAAGTATGATGC
 
. : . : . : . : . : . :
rJMSF010A18+ AATTATAGTTGACTCATCGGATCCTGTTGGTCCTGCCCAGGAACTGGTAGAAAAACCATT
rJMFF027F15+ AATTATAGTTGACTCATCGGATCCTGTTGGTCCTGCCCAGGAACTGGTAGAAAAACCATT
                      ____________________________________________________________
consensus AATTATAGTTGACTCATCGGATCCTGTTGGTCCTGCCCAGGAACTGGTAGAAAAACCATT
 
. : . : . : . : . : . :
rJMSF010A18+ TTTTGAGACATTAGCTAGAGCATTAAGACCTGGTGGTGTTCTTTGCAACATGGCAGAGAG
rJMFF027F15+ TTTTGAGACATTAGCTAGAGCATTAAGACCTGGTGGTGTTCTTTGCAACATGGCAGAGAG
                      ____________________________________________________________
consensus TTTTGAGACATTAGCTAGAGCATTAAGACCTGGTGGTGTTCTTTGCAACATGGCAGAGAG
 
. : . : . : . : . : . :
rJMSF010A18+ TATGTGGCTTCACACACATCTGATTCAGGATATTATTGCTATTTGCCGTGAAACATTTAA
rJMFF027F15+ TATGTGGCTTCACACACATCTGATTCAGGATATTATTGCTATTTGCCGTGAAACATTTAA
                      ____________________________________________________________
consensus TATGTGGCTTCACACACATCTGATTCAGGATATTATTGCTATTTGCCGTGAAACATTTAA
 
. : . : . : . : . : . :
rJMSF010A18+ GGGTTCCGTTCACTATGCATGGACCAGTGTTCCTACATATCCAAGTGGTGTTATTGGGTT
rJMFF027F15+ GGGTTCCGTTCACTATGCATGGACCAGTGTTCCTACATATCCAAGTGGTGTTATTGGGTT
rJMFF051F24+ TATGCATGGACCAGTGTTCCTACATATCCAAGTGGTGTTATTGGGTT
                      ____________________________________________________________
consensus GGGTTCCGTTCACTATGCATGGACCAGTGTTCCTACATATCCAAGTGGTGTTATTGGGTT
 
. : . : . : . : . : . :
rJMSF010A18+ TGTGTTATGCTCAACTGAAGGCCCGCCTGTTGATTTTTTAAACCCAATCAATCCCATTGA
rJMFF027F15+ TGTGTTATGCTCAACTGAAGGCCCGCCTGTTGATTTTTTAAACCCAATCAATCCCATTGA
rJMFF051F24+ TGTGTTATGCTCAACTGAAGGCCCGCCTGTTGA-TTTTTAAACCCAATCAATCCCATTGA
                      ____________________________________________________________
consensus TGTGTTATGCTCAACTGAAGGCCCGCCTGTTGATTTTTTAAACCCAATCAATCCCATTGA
 
. : . : . : . : . : . :
rJMSF010A18+ AAAGCTTGATGGAGCGCTTCAATATCGCAGGGAACTAAGG-TTTACAATTCCGAGGTTCA
rJMFF027F15+ AAAGCTTGATGGAGCGCTTCAATATCGCAGGGAACTAAGGTTTTACAATTCCGAGGTTCA
rJMFF051F24+ AAAGCTTGATGGAGCGCTTCAATATCGCAGGGAACTAAGGTTTTACAATTCCGAGGTTCA
                      ____________________________________________________________
consensus AAAGCTTGATGGAGCGCTTCAATATCGCAGGGAACTAAGGTTTTACAATTCCGAGGTTCA
 
. : . : . : . : . : . :
rJMSF010A18+ TCGAGCTGCATTTGCCTTGCCATCTTTTGTAAAGCGAGAGGTGAGCTGTCTGCGAGATGT
rJMFF027F15+ TCGAGCTGCATTTGCCTTGCCATCTTTTGTAAAGCGAGAGGTGAGCTGTCTGCGAGATGT
rJMFF051F24+ TCGAGCTGCATTTGCCTTGCCATCTTTTGTAAAGCGAGAGGTGAGCTGTCTGCGAGATGT
                      ____________________________________________________________
consensus TCGAGCTGCATTTGCCTTGCCATCTTTTGTAAAGCGAGAGGTGAGCTGTCTGCGAGATGT
 
. : . : . : . : . : . :
rJMSF010A18+ CCCGCCTGCAACCGCGGTACATACTTAGTAGTTTGATTTTTACTGACTACTAATCCATTC
rJMFF027F15+ CCCGCCTGCAACCGCGGTACATACTTAGTAGTTTGATTTTTACTGACTACTAATCCATTC
rJMFF051F24+ CCCGCCTGCAACCGCGGTACATACTTAGTAGTTTGATTTTTACTGACTACTAATCCATTC
                      ____________________________________________________________
consensus CCCGCCTGCAACCGCGGTACATACTTAGTAGTTTGATTTTTACTGACTACTAATCCATTC
 
. : . : . : . : . : . :
rJMSF010A18+ CCATGTTATTTGGAGCTACACGAGAATGTTAAGAGTACTGATCGGACTTTTAGATAAGCA
rJMFF027F15+ CCATGTTATTTGGAGCTACACGAGAATGTTAAGAGTACTGATCGGACTTTTAGATAAGCA
rJMFF051F24+ CCATGTTATTTGGAGCTACACGAGAATGTTAAGAGTACTGATCGGACTTTTAGATAAGCA
                      ____________________________________________________________
consensus CCATGTTATTTGGAGCTACACGAGAATGTTAAGAGTACTGATCGGACTTTTAGATAAGCA
 
. : . : . : . : . : . :
rJMSF010A18+ GTCGAAGCAAGCTTAGACGCTGCAATGACTCTATGTATTAGGTGTTTGATTGGCATATAA
rJMFF027F15+ GTCGAAACAAGCTTAGACGCTGCAATGACTCTATGTATTAGGTGTTTGATTGGCATATAA
rJMFF051F24+ GTCGAAACAAGCTTAGACGCTGCAATGACTCTATGTATTAGGTGTTTGATTGGCATATAA
                      ____________________________________________________________
consensus GTCGAAACAAGCTTAGACGCTGCAATGACTCTATGTATTAGGTGTTTGATTGGCATATAA
 
. : . : . : . : . : . :
rJMSF010A18+ GCGGGTGCGT
rJMFF027F15+ GCGGGTGCGTTGGAATCTTCTAAATACTGCGATGTCTATTGATAAATTTGTGATTCAGCA
rJMFF051F24+ GCGGGTGCGTTGGAATCTTCTAAATACTGCGATGTCTATTGATAAATTTGTGATTCAGCA
                      ____________________________________________________________
consensus GCGGGTGCGTTGGAATCTTCTAAATACTGCGATGTCTATTGATAAATTTGTGATTCAGCA
 
. : . : . : . : . : . :
rJMFF027F15+ ACACTATATTGCACTGCTCTTCTCAGAAAGT
rJMFF051F24+ ACACTATATTGCACTGCTCTTCTCAGAAAGTGCAGCATTATGAATTTTATTGGTGCTGGG
                      ____________________________________________________________
consensus ACACTATATTGCACTGCTCTTCTCAGAAAGTGCAGCATTATGAATTTTATTGGTGCTGGG