Contig 005557:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF047O09Sequence463005557 (4)ref|XP_011102289.1|139PREDICTED: uncharacterized protein LOC105180320 [Sesamum indicum]356005557 (4)ref|XP_004307419.1|99.8PREDICTED: uncharacterized protein LOC101307627 [Fragaria vesca subsp. vesca]
JMFF049P18Sequence633005557 (4)ref|XP_011102289.1|153PREDICTED: uncharacterized protein LOC105180320 [Sesamum indicum]604005557 (4)ref|XP_011102289.1|153PREDICTED: uncharacterized protein LOC105180320 [Sesamum indicum]

Alignment

This contig is upended


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JMFF047O09-                                   TGACTCATTAGAATTTGATTTTCAGGATGTGAAAGC
                      ____________________________________________________________
consensus                                     TGACTCATTAGAATTTGATTTTCAGGATGTGAAAGC
 
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JMFF047O09-           ATTTTGATTTCAGAATTTGGAGGCTGATTATAGTGTGTTATTGAATTATTGCAGAACATT
JMFF049P18-                                                                GAACATT
rJMFF049P18+                                                                  CATT
                      ____________________________________________________________
consensus             ATTTTGATTTCAGAATTTGGAGGCTGATTATAGTGTGTTATTGAATTATTGCAGAACATT
 
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JMFF047O09-           CAGATTCATACAGAGATAATAAAAGTGCGCTGTTGTGATACTGCGAGGAAGGGAATCAAA
JMFF049P18-           CAGATTCATACAGAGATAATAAAAGTGCGCTGTTGTGATACTGCGAGGAAGGGAATCAAA
rJMFF049P18+          CAGATTCATACAGAGATAATAAAAGTGCGCTGTTGTGATACTGCGAGGAAGGGAATCAAA
                      ____________________________________________________________
consensus             CAGATTCATACAGAGATAATAAAAGTGCGCTGTTGTGATACTGCGAGGAAGGGAATCAAA
 
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JMFF047O09-           TTAATCAATGGGTTCGGCAGGGAAAGAGGCGTACAGGAGCCTTCTGAAAGCGGTGAAGAA
JMFF049P18-           TTAATCAATGGGTTCGGCAGGGAAAGAGGCGTACAGGAGCCTTCTGAAAGCGGTGAAGAA
rJMFF049P18+          TTAATCAATGGGTTCGGCAGGGAAAGAGGCGTACAGGAGCCTTCTGAAAGCGGTGAAGAA
                      ____________________________________________________________
consensus             TTAATCAATGGGTTCGGCAGGGAAAGAGGCGTACAGGAGCCTTCTGAAAGCGGTGAAGAA
 
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JMFF047O09-           ACACGTTGTAAAAGGAGAGCACAAACCCTATTTCACCGACTATATAAGGGAGGAGTTTAG
JMFF049P18-           ACACGTTGTAAAAGGAGAGCACAAACCCTATTTCACCGACTATATAAGGGAGGAGTTTAG
rJMFF049P18+          ACACGTTGTAAAAGGAGAGCACAAACCCTATTTCACCGACTATATAAGGGAGGAGTTTAG
                      ____________________________________________________________
consensus             ACACGTTGTAAAAGGAGAGCACAAACCCTATTTCACCGACTATATAAGGGAGGAGTTTAG
 
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JMFF047O09-           GAAGAGCGTTAACAGTCCAGCTCCTAACGCTCGGGAAGGATTACAGCTTGCCAAAGATTA
JMFF049P18-           GAAGAGCGTTAACAGTCAAGCTCCTAACGCTCGGGAAGGATTACAGCTTGCCAAAGATTA
rJMFF047O09+                                                         TTGCCAAAGATTA
rJMFF049P18+          GAAGAGCGTTAACAGTCAAGCTCCTAACGCTCGGGAAGGATTACAGCTTGCCAAAGATTA
                      ____________________________________________________________
consensus             GAAGAGCGTTAACAGTCAAGCTCCTAACGCTCGGGAAGGATTACAGCTTGCCAAAGATTA
 
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JMFF047O09-           CACTTTTCTGCTCAACAGTGTTCACCATCACAAGGACTTGCTATTTTCTTACAATATCGC
JMFF049P18-           CACTTTTCTGCTCAACAGTGTTCACCATCACAAGGACTTGCTATTTTCTTACAATATCGC
rJMFF047O09+          CACTTTTCTGCTCAACAGTGTTCACCATCACAAGGACTTGCTATTTTCTTACAATATCGC
rJMFF049P18+          CACTTTTCTGCTCAACAGTGTTCACCATCACAAGGACTTGCTATTTTCTTACAATATCGC
                      ____________________________________________________________
consensus             CACTTTTCTGCTCAACAGTGTTCACCATCACAAGGACTTGCTATTTTCTTACAATATCGC
 
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JMFF047O09-           GGTTGATAGGTCTGATGAGATGAAGAAAGTTCTGGGCAAATCCGCAAGCAGTGTGGGTCT
JMFF049P18-           GGTTGATAGGTCTGATGAGATGAAGAAAGTTCTGGGCAAATCCGCAGCAAGTGTGGGTCT
rJMFF047O09+          GGTTGATAGGTTTGATGAGATGAAGAAAGTTTTGGGCAAATCCGCAGCAAGTGTGGGTTT
rJMFF049P18+          GGTTGATAGGTCTGATGAGATGAAGAAAGTTCTGGGCAAATCCGCAGCAAGTGTGGGTCT
                      ____________________________________________________________
consensus             GGTTGATAGGTCTGATGAGATGAAGAAAGTTCTGGGCAAATCCGCAGCAAGTGTGGGTCT
 
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JMFF047O09-           CCAACTC                                                     
JMFF049P18-           CCAACTCCCTGATGTTTATCAGCCATGACAGCCAAAGGAGCTTTCATTAGCAGCAATGGA
rJMFF047O09+          CCAACTCCCTCTTGTTTATCAGCCATGACAGCCAAAGGAGCTTTCATTAGCAGCAATGGA
rJMFF049P18+          CCAACTCCCTGATGTTTATCAGCCATGACAGCCAAAGGAGCTTTCATTAGCAGCAATGGA
                      ____________________________________________________________
consensus             CCAACTCCCTGATGTTTATCAGCCATGACAGCCAAAGGAGCTTTCATTAGCAGCAATGGA
 
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JMFF049P18-           AACTGGGATTTGCTGCAAAACTGCCCAAATTCAGGCATTTATCAGCTCTGCAGAATTTCC
rJMFF047O09+          AACTGGGATTTGCTGCAAAACTGCCCAAATTCAGGCATTTTTCAGCTTTGCAGAATTTCC
rJMFF049P18+          AACTGGGATTTGCTGCAAAACTGCCCAAATTCAGGCATTTATCAGCTCTGCAGAATTTCC
                      ____________________________________________________________
consensus             AACTGGGATTTGCTGCAAAACTGCCCAAATTCAGGCATTTATCAGCTCTGCAGAATTTCC
 
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JMFF049P18-           AAGCCTTTTTACATGCCTTNCACATGAACAGCATTGATAATGCTTCAGTCAAGAAATCTT
rJMFF047O09+          AAGCCTTTTTACATGCCTTCAACATGAACAGCATTGATAATGCTTCAGTCAAGGTATTTT
rJMFF049P18+          AAGCCTTTTTACATGCCTTCAACATGAACAGCATTGATAATGCTTCAGTCAAGAAATCTT
                      ____________________________________________________________
consensus             AAGCCTTTTTACATGCCTTCAACATGAACAGCATTGATAATGCTTCAGTCAAGAAATCTT
 
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JMFF049P18-           GTTGAAATTTCAGTTTTTTTTTTTNATAAAA                             
rJMFF047O09+          GTTGAATTTCAAGTTTTTTTTTTTAATAAAA                             
rJMFF049P18+          GTTGAATTTCAAGTTTTTTTTTTTAATAAAAATAAATAAATAAATAAATATAATTGTGGT
                      ____________________________________________________________
consensus             GTTGAATTTCAAGTTTTTTTTTTTAATAAAAATAAATAAATAAATAAATATAATTGTGGT