| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF033B04 | Sequence | 552 | 013790 (7) | ref|XP_006347553.1| | 2e-23 | PREDICTED: aluminum-activated malate transporter 4-like [Solanum tuberosum] | 765 | 005553 (5) | ref|XP_004235305.1| | 3e-71 | PREDICTED: aluminum-activated malate transporter 4-like [Solanum lycopersicum] |
| JMFF048O11 | Sequence | 578 | 013790 (7) | ref|XP_006347553.1| | 1e-39 | PREDICTED: aluminum-activated malate transporter 4-like [Solanum tuberosum] | 517 | 005553 (5) | ref|XP_011084602.1| | 1e-29 | PREDICTED: aluminum-activated malate transporter 4-like isoform X1 [Sesamum ind |
| JMFN029A07 | Sequence | 539 | 005553 (5) | ref|XP_011075828.1| | 2e-36 | PREDICTED: aluminum-activated malate transporter 4-like [Sesamum indicum] | |||||
| JMSF029G19 | Sequence | 262 | 005553 (5) | ref|XP_009628763.1| | 6e-28 | PREDICTED: aluminum-activated malate transporter 4-like [Nicotiana tomentosifor | |||||
| JMSF048G18 | Sequence | 692 | 013790 (7) | ref|XP_009795348.1| | 6e-65 | PREDICTED: aluminum-activated malate transporter 4-like [Nicotiana sylvestris] | 742 | 005553 (5) | ref|XP_004235305.1| | 7e-72 | PREDICTED: aluminum-activated malate transporter 4-like [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF048G18+ CGAAGAAGTACATGAAGCAGCCGAGGAGTTGCAGATATTGATAGACCAAAAATCG
rJMFF033B04+ CTCGAAGAAGTACATGAAGCAGCCGAGGAGTTGCAGATATTGATAGACCAAAAATCG
____________________________________________________________
consensus CTCGAAGAAGTACATGAAGCAGCCGAGGAGTTGCAGATATTGATAGACCAAAAATCG
. : . : . : . : . : . :
rJMSF048G18+ TACTTATTGATCAATGCTGAGAACTGGGAGCGAGGGAGGCGGCCAAAGAATTTACAGGAT
rJMFF033B04+ TACTTATTGATCAATGCTGAGAACTGGGAGCGAGGGAGGCGGCCAAAGAATTTACAGGAT
____________________________________________________________
consensus TACTTATTGATCAATGCTGAGAACTGGGAGCGAGGGAGGCGGCCAAAGAATTTACAGGAT
. : . : . : . : . : . :
rJMSF048G18+ CCCGAGGAGCTTCAAGACCTCAAGGATAGCCAGCAGAAACAACCAATGCTGATAAACTCC
rJMSF029G19+ TGATAANCTCC
rJMFF033B04+ CCCGAGGAGCTTCAAGACTCCAAGGATAGCCAGCAGAAACAACCAATGCTGATAAACTCC
____________________________________________________________
consensus CCCGAGGAGCTTCAAGACTTCAAGGATAGCCAGCAGAAACAACCAATGCTGATAAACTCC
. : . : . : . : . : . :
rJMSF048G18+ CTAAGCGAAGCAACGCTCAACTTGAGGTCCATGCAGTCGCTAAAGCACATCGACGCTCAA
JMFN029A07- GCAGTCGCTAAAGCACATCGACGCTCAA
rJMSF029G19+ GTAAGCGAAGCAACGCTCAACCTGNGGTCCANGCAGTCGCTAAAGCACATCGACGCTCAA
rJMFF033B04+ CTAAGCGAAGCAACGCTCAACTTGAGGTCCATGCAGTCGCTAAAGCACATCGACGCTCAA
____________________________________________________________
consensus CTAAGCGAAGCAACGCTCAACTTGAGGTCCATGCAGTCGCTAAAGCACATCGACGCTCAA
. : . : . : . : . : . :
rJMSF048G18+ AACCCGAACATGAGTGTCATTTCGCAATGGGAATCGACTAACGACATGCTGAAGCAGCAG
JMFN029A07- AACCCGAACATGAGTGTCATTTCGCAATGGGAATCGACTAACGACATGCTGAAGCAGCAG
rJMSF029G19+ AACCCGAACNTGAGTGTCANTTCGCAATGGGAATCGACNAACGACATGNTGAAGCAGCAG
rJMFF033B04+ AACCCGAACATGAGTGTCATTTCGCAATGGGAATCGACTAACGACATGCTGAAGCAGCAG
rJMFF048O11+ GCAATGGGAATGGACTAACGACATGCTGAAGCAGCAG
____________________________________________________________
consensus AACCCGAACATGAGTGTCATTTCGCAATGGGAATCGACTAACGACATGCTGAAGCAGCAG
. : . : . : . : . : . :
rJMSF048G18+ ATGAACTGGCCCTCCCGCCTCTCGATGCTCGGGGACACCATTCTCAACGAGCGGGAGGTC
JMFN029A07- ATGAACTGGCCCTCCCGCCTCTCGATGCTCGGGGACACCATTCTCAACGAGCGGGAGGTC
rJMSF029G19+ ATGAANTGGCCCTCCCGCCTCTCGATGCTCGGGGACACCATTCTCAACGAGCGGGAGGTC
rJMFF033B04+ ATGAACTGGCCCTCCCGCCTCTCGATGCTCGGGGACACCATTCTCAACGAGCGGGAGGTC
rJMFF048O11+ ATGAACTGGCCCTCCCGCCTCTCGATGTTTGGGGACACCATTCTCAACGAGCGGGAGGTC
____________________________________________________________
consensus ATGAACTGGCCCTCCCGCCTCTCGATGCTCGGGGACACCATTCTCAACGAGCGGGAGGTC
. : . : . : . : . : . :
rJMSF048G18+ AGGACTTACGAGAGCGCGAGCCCGTTGTCACTCGCAACGTTCACTTCCCTGCTGGTTGAA
JMFN029A07- AGGACTTACGAGAGCGCGAGCCCGTTGTCACTCGCAACGTTCACTTCCCTGCTGGTTGAA
rJMSF029G19+ AGGACNTACGAGAGCGCGAGCCCGTTGTCACTCGCAACGTTCACTTCCNTGCNGGTTGAN
rJMFF033B04+ AGGACTTACGAGAGCGCGAGCCCGTTGTCACTCGCAACGTTCACTTCCCTGCTGGTTGAA
rJMFF048O11+ AGGACTTACGAGAGCGCGAGCCCGTTGTCACTGGCAACGTTCACTTCCCTGCTGGTTGAA
____________________________________________________________
consensus AGGACTTACGAGAGCGCGAGCCCGTTGTCACTCGCAACGTTCACTTCCCTGCTGGTTGAA
. : . : . : . : . : . :
rJMSF048G18+ TTCGTTGCCAGGCTTCACAATCTCGTGGGGGCGTTCGAAGTTCTTAGCGAAAAGGCCAAA
JMFN029A07- TTCGTTGCCAGGCTTCACAATCTCGTGGGGGCGTTCGAAGTTCTTAGCGAAAAGGCCAAA
rJMSF029G19+ TTCGTTGCCAG
rJMFF033B04+ TTCGTTGCCAGGCTTCACAATCTCGTGGGGGCGTTCGAAGTTCTTAGCGAAAAGGCCAAA
rJMFF048O11+ TTCGTTGCCAGGCTTCACAATCTCGTGGGGGCGTTCGAAGTTCTTAGCGAAAAGGCCAAA
____________________________________________________________
consensus TTCGTTGCCAGGCTTCACAATCTCGTGGGGGCGTTCGAAGTTCTTAGCGAAAAGGCCAAA
. : . : . : . : . : . :
rJMSF048G18+ TTTAAGGAGCCAGTAGATGATGATGAAGAAAACTGATACATAATTAAGAAGCTTTTTAGG
JMFN029A07- TTTAAGGAGCCAGTAGATGATGATGAAGAAAACTGATACATAATTAAGAAGCTTTTTAGG
rJMFF033B04+ TTTAAGGAGCCAGTAGATGATGATGAAGAAAACTGATACATAATTAAGAAGCTTTTTAGG
rJMFF048O11+ TTTAAGGAGCCAGTAGATGATGATGAAGAAAATTGATACATAATTAAGAAGCTTTTTAGG
____________________________________________________________
consensus TTTAAGGAGCCAGTAGATGATGATGAAGAAAACTGATACATAATTAAGAAGCTTTTTAGG
. : . : . : . : . : . :
rJMSF048G18+ TAGGTTGAAACTCAGAGAGTGGATTCTCAATTCTATCCCTTTCTGGGCTCATGAAGGTTT
JMFN029A07- TAGGTTGAAACTCAGAGAGTGGATTCTCAATTCTATCCCTTTCTGGGCTCATGAAGGTTT
rJMFF033B04+ TAGGTTGAAACTCAGAGAGTGGATTCTCAATTCTATCCCTTTCTGGGCTCATGAAGGTTT
rJMFF048O11+ TAGGTTGAAACTCAGAGAGTGGATTCTCAATTCTATCCCTTTTTGGGCTCATGAAGGTTT
____________________________________________________________
consensus TAGGTTGAAACTCAGAGAGTGGATTCTCAATTCTATCCCTTTCTGGGCTCATGAAGGTTT
. : . : . : . : . : . :
rJMSF048G18+ GAAGTCTCTGATATGATTACCATCTACCTACTGAATTTGTATCTTTACTGCAGTATTGCA
JMFN029A07- GAAGTCTCTGATATGATTACCATCTACCTACTGAATTTGTATCTTTACTGCAGTATTGCA
rJMFF033B04+ GAAGTCTCTGATATGATTACCATCTACCTACTGAATTTGTATCTTTACTGCAGTATTGCA
rJMFF048O11+ GAAGTCTCTGATATGATTACCATCTACCTACTGAATTTGTATCTTTACTGCAGTATTGCA
____________________________________________________________
consensus GAAGTCTCTGATATGATTACCATCTACCTACTGAATTTGTATCTTTACTGCAGTATTGCA
. : . : . : . : . : . :
rJMSF048G18+ GAAATGGTGTCTGTTGAATCAGATATGAAGTTCACAGAAATTTGTTTATACCTTGTTTGG
JMFN029A07- GAAATGGTGTCTGTTGAATCAGATATGAAGTTCACAGAAATTTGTTTATACCTTGTTTGG
rJMFF033B04+ GAAATGGTGTCTGTTGAATCAGATATGAAGTTCACAGAAATTTGTTTATACCTTGTTTGG
rJMFF048O11+ GAAATGGGGTCTGTTGAATCAGATATGAAGTTCCCAGAAATTTGTTTATACCTGGTTGGG
____________________________________________________________
consensus GAAATGGTGTCTGTTGAATCAGATATGAAGTTCACAGAAATTTGTTTATACCTTGTTTGG
. : . : . : . : . : . :
rJMSF048G18+ CTGAATGTAAAATCCTGTATTTGTAAT
JMFN029A07- CTGAATGTAAAATCCTGTATTTGTAAT
rJMFF033B04+ CTGAATGTAAAGTCCTGTATTTGTAATATTCTTTTGCGGAATCCAAAG
rJMFF048O11+ CTGAATGTAAAATCCAGTATTTGTAATATTCTTTTGCGAAATCCAAAGTGGAGGAAACTT
____________________________________________________________
consensus CTGAATGTAAAATCCTGTATTTGTAATATTCTTTTGCGGAATCCAAAGTGGAGGAAACTT