| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001F16 | Sequence | 610 | 004560 (3) | ref|XP_007210357.1| | 7e-101 | hypothetical protein PRUPE_ppa001580mg [Prunus persica] gb|EMJ11556.1| hypotheti | 718 | 005534 (8) | ref|XP_009603996.1| | 2e-56 | PREDICTED: CSC1-like protein At1g32090 [Nicotiana tomentosiformis] |
| JMFF025G20 | Sequence | 513 | 004560 (3) | ref|XP_007210357.1| | 4e-95 | hypothetical protein PRUPE_ppa001580mg [Prunus persica] gb|EMJ11556.1| hypotheti | 240 | 005534 (8) | ref|XP_009603996.1| | 8e-14 | PREDICTED: CSC1-like protein At1g32090 [Nicotiana tomentosiformis] |
| JMFF034G09 | Sequence | 615 | 004560 (3) | ref|XP_007210357.1| | 1e-113 | hypothetical protein PRUPE_ppa001580mg [Prunus persica] gb|EMJ11556.1| hypotheti | 707 | 005534 (8) | ref|XP_009603996.1| | 1e-42 | PREDICTED: CSC1-like protein At1g32090 [Nicotiana tomentosiformis] |
| JMFF037O23 | Sequence | 565 | 006084 (5) | ref|XP_007210357.1| | 3e-44 | hypothetical protein PRUPE_ppa001580mg [Prunus persica] gb|EMJ11556.1| hypotheti | 713 | 005534 (8) | ref|XP_009603996.1| | 5e-38 | PREDICTED: CSC1-like protein At1g32090 [Nicotiana tomentosiformis] |
| JMFF046K16 | Sequence | 543 | 006084 (5) | ref|XP_007210357.1| | 4e-40 | hypothetical protein PRUPE_ppa001580mg [Prunus persica] gb|EMJ11556.1| hypotheti | 532 | 005534 (8) | ref|XP_009603996.1| | 5e-26 | PREDICTED: CSC1-like protein At1g32090 [Nicotiana tomentosiformis] |
| JMSF020I22 | Sequence | 660 | 006084 (5) | ref|XP_009603996.1| | 9e-97 | PREDICTED: CSC1-like protein At1g32090 [Nicotiana tomentosiformis] | 735 | 005534 (8) | ref|XP_009603996.1| | 3e-41 | PREDICTED: CSC1-like protein At1g32090 [Nicotiana tomentosiformis] |
| JMSF041D24 | Sequence | 684 | 005534 (8) | ref|XP_009603996.1| | 9e-39 | PREDICTED: CSC1-like protein At1g32090 [Nicotiana tomentosiformis] | |||||
| JMSF042E02 | Sequence | 573 | 005534 (8) | ref|XP_009784323.1| | 2e-30 | PREDICTED: CSC1-like protein At1g32090 [Nicotiana sylvestris] | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF001F16+ GT
____________________________________________________________
consensus GT
. : . : . : . : . : . :
rJMFF001F16+ ATATCGCCATCAGGTAATCAATGTTTACAACCAAAAGTACGAGAGCGCGGCTGCATTTTG
rJMSF020I22+ ATATCGCCATCAGGTAATCAATGTTTACAACCAAAAGTACGAGAGCGCGGCTGCATTTTG
____________________________________________________________
consensus ATATCGCCATCAGGTAATCAATGTTTACAACCAAAAGTACGAGAGCGCGGCTGCATTTTG
. : . : . : . : . : . :
rJMFF001F16+ G-CCCCACGTTCATGCTCGTATAATAGCAAGCTTGTTGATATCGCAA-CTGCTTTTGTTG
rJMSF020I22+ GCCCCCACGTTCATGCTCGTATAATAGCAAGCTTGTTGATATCGCAA-CTGCTTTTGTTG
rJMSF041D24+ GTTCATGCTCGTATAATAGCAAGCTTGTTGATATCGCAA-CTGCTTTTGTTG
rJMFF034G09+ CCCCACGTTCATGCTCGTATAATAGCAAGCTTGTTGATATCGCAA-CTGCTTTTGTTG
rJMFF037O23+ CCCCACGTTCATGCTCGTATAATAGCAAGCTTGTNGATATCGCAACCTGCTTTTGTTG
____________________________________________________________
consensus GCCCCCACGTTCATGCTCGTATAATAGCAAGCTTGTTGATATCGCAA-CTGCTTTTGTTG
. : . : . : . : . : . :
rJMFF001F16+ GGTCTGCTCAGCACTAAAAAAGCTGCAAACTCGACTCCTCTGCTTGTTGTGTTGCCAATT
rJMSF020I22+ GGTCTGCTCAGCACTAAAAAAGCTGCAAACTCGACTCCTCTGCTTGTTGTGTTGCCAATT
rJMSF042E02+ CTTGTTGTGTTGCCAATT
rJMSF041D24+ GGTCTGCTCAGCACTAAAAAAGCTGCAANCTCGACTCCTCTGCTTGTTGTGTTGCCAATT
rJMFF034G09+ GGTCTGCTCAGCACTAAAAAAGCTGCAAACTCGACTCCTCTGCTTGTTGTGTTGCCAATT
rJMFF037O23+ GGTCTGCTCAGCACTAAAAAAGCTGCAAACTCGACTCCTCTGCTTGTTGTGTTGCCAATT
____________________________________________________________
consensus GGTCTGCTCAGCACTAAAAAAGCTGCAAACTCGACTCCTCTGCTTGTTGTGTTGCCAATT
. : . : . : . : . : . :
rJMFF001F16+ TTGACGTTAGCGTTTCATAAATACTGCAAGAACCGATTTGAACCCGCATTCAGAAGATAT
rJMSF020I22+ TTGACGTTAGCGTTTCATAAATACTGCAAGAACCGATTTGAACCCGCATTCAGAAGATAT
rJMSF042E02+ NTGACGTTAGCGTTTCATAAATNCTGCAAGAACCGATTTGAACCCGCATTCAGAAGATAT
rJMSF041D24+ TTGACGTTAGCGTTTCATAAATACTGCAAGAACCGATTTGAACCCGCATTCAGAAGATAT
rJMFF034G09+ TTGACGTTAGCGTTTCATAAATACTGCAAGAACCGATTTGAACCCGCATTCAGAAGATAT
rJMFF037O23+ TTGACGTTAGCGTTTCATAAATACTGCAAGAACCGATTTGAACCCGCATTCAGAAGATAT
____________________________________________________________
consensus TTGACGTTAGCGTTTCATAAATACTGCAAGAACCGATTTGAACCCGCATTCAGAAGATAT
. : . : . : . : . : . :
rJMFF001F16+ CCTCTCGAGGAAGCAACGGACAAGGACATGCAAGACGATCCTGAATCGAATGCCAATCTG
rJMSF020I22+ CCTCTCGAGGAAGCAACGGACAAGGACATGCAAGACGATCCTGAATCGAATGCCAATCTG
rJMSF042E02+ CCTCTCGAGGAAGCAACGGACAAGGACATGCAAGACGATCCNGAATCGAATGCCAATNTG
rJMSF041D24+ CCTCTCGAGGAAGCAACGGACAAGGACATGCAAGACGATCCTGAATCGAATGCCAATCTG
rJMFF034G09+ CCTCTCGAGGAAGCAACGGACAAGGACATGCAAGACGATCCTGAATCGAATGCCAATCTG
rJMFF037O23+ CCTCTCGAGGAAGCAACGGACAAGGACATGCAAGACGATCCTGAATCGAATGCCAATCTG
rJMFF046K16+ AGGAAGCAACGGACAAGGACATGCAAGACGATCCTGAATCGAATGCCAATCTG
____________________________________________________________
consensus CCTCTCGAGGAAGCAACGGACAAGGACATGCAAGACGATCCTGAATCGAATGCCAATCTG
. : . : . : . : . : . :
rJMFF001F16+ AAAGCTTTATTAGCTGATGCATATCTGCATCCAATCTTCAACTCATTTGAAGAAGTAGAG
rJMSF020I22+ AAAGCTTTATTAGCTGATGCATATCTGCATCCAATCTTCAACTCATTTGAAGAAGTAGAG
rJMSF042E02+ AAAGCTTTNTTAGCTGATGCATATCNGCATCCAATCTTCAACTCATTTGAAGAAGTAGAG
rJMSF041D24+ AAAGCTTTATTAGCTGATGCATATCTGCATCCAATCTTCAACTCATTTGAAGAAGTAGAG
rJMFF034G09+ AAAGCTTTATTAGCTGATGCATATCTGCATCCAATCTTCAACTCATTTGAAGAAGTAGAG
rJMFF037O23+ AAAGCTTTATTAGCTGATGCATATCTGCATCCAATCTTCAACTCATTTGAAGAAGTAGAG
rJMFF046K16+ AAAGCTNTATTAGCTGATGCATATCTGCATCCAATCTTCAACTCATTTGAAGAAGTAGAG
____________________________________________________________
consensus AAAGCTTTATTAGCTGATGCATATCTGCATCCAATCTTCAACTCATTTGAAGAAGTAGAG
. : . : . : . : . : . :
rJMFF001F16+ TTGGTCGAGGTGAAAGTCGACAAAAACCAGTCTCCGAGCCCAGCTAGTGAACCCGACCAC
rJMSF020I22+ TTGGTCGAGGTGAAAGTCGACAAAAACCAGTCTCCGAGCCCAGCTAGTGAACCCGACCAC
rJMSF042E02+ TTGGTCGAGGTGAAAGTCGACAAAAACCAGTCTCCGAGCCCAGNTAGTGAACCCGACCAC
rJMSF041D24+ TTGGTCGAGGTGAAAGTCGACAAAAACCAGTCTCCGAGCCCAGCTAGTGAACCCGACCAC
rJMFF034G09+ TTGGTCGAGGTGAAAGTCGACAAAAACCAGTCTCCGAGCCCAGCTAGTGAACCCGACCAC
rJMFF037O23+ TTGGTCGAGGTGAAAGTCGACAAAAACCAGTCTCCGAGCCCAGCTAGTGAACCCGACCAC
rJMFF046K16+ TTGGTCGAGGTGAAAGTCGACAAAAACCAGTCTCCGAGCCCAGCTAGTGAACCCGACCAC
____________________________________________________________
consensus TTGGTCGAGGTGAAAGTCGACAAAAACCAGTCTCCGAGCCCAGCTAGTGAACCCGACCAC
. : . : . : . : . : . :
rJMFF001F16+ GACAAAAACCAGTCCCGAGCCTCGAGTAGTCCATTAAGCGAGCTCAGTTCTCCATCTCCG
rJMSF020I22+ GACAAAAACCAGTCCCGAGCCTCGAGTAGTCCATTAAGCGAGCTCAGTTCTCCATCTCCG
rJMSF042E02+ GACAAAAACCAGTCCCGAGCCTCGAGTAGTCCATTAAGCGAGCTCAGTTCTCCATCTCCG
rJMSF041D24+ GACAAAAACCAGTCCCGAGCCTCGAGTAGTCCATTAAGCGAGCTCAGTTCTCCATCTCCG
rJMFF034G09+ GACAAAAACCAGTCCCGAGCCTCGAGTAGTCCATTAAGCGAGCTCAGTTCTCCATCTCCG
rJMFF037O23+ GACAAAAACCAGTCCCGAGCCTCGAGTAGTCCATTAAGCGAGCTCAGTTCTCCATCTCCG
rJMFF046K16+ GACAAAAACCAGTCCCGAGCCTCGAGTAGTCCATTAAGCGAGCTCAGTTCTCCATCTCCG
____________________________________________________________
consensus GACAAAAACCAGTCCCGAGCCTCGAGTAGTCCATTAAGCGAGCTCAGTTCTCCATCTCCG
. : . : . : . : . : . :
rJMFF001F16+ ACTCATCATCAGCATGCCCATAATCATGACGAAGACGAGCAATCACAGAAAGTCCAGCAT
rJMSF020I22+ ACTCATCATCAGCATGCCCATAATCATGACGAAGACGAGCAATCACAGAAAGTCCAGCAT
rJMSF042E02+ ACTCATCATCAGCATGCCCATAATCATGANGAAGACGAGCAATCACAGAAAGTCCAGCAT
rJMSF041D24+ ACTCATCATCAGCATGCCCATAATCATGACGAAGACGAGCAATCACAGAAAGTCCAGCAT
rJMFF034G09+ ACTCATCATCAGCATGCCCATAATCATGACGAAGACGAGCAATCACAGAAAGTCCAGCAT
rJMFF037O23+ ACTCATCATCAGCATGCCCATAATCATGACGAAGACGAGCAATCACAGAAAGTCCAGCAT
rJMFF025G20+ CCCATAATCATGACGAAGACGAGCAATCACAGAAAGTCCAGCAT
rJMFF046K16+ ACTCATCATCAGCATGCCCATAATCATGACGAAGACGAGCAATCACAGAAAGTCCAGCAT
____________________________________________________________
consensus ACTCATCATCAGCATGCCCATAATCATGACGAAGACGAGCAATCACAGAAAGTCCAGCAT
. : . : . : . : . : . :
rJMFF001F16+ TATGAGGCCGGGCCGCCTGGTGATATCTTTCACTATGAATATCAGCAATCTGAGTATATG
rJMSF020I22+ TATGAGGCCGGGCCGCCTGGTGATATCTTTCACTATGAATATCAGCAATCTGAGTATATG
rJMSF042E02+ TATGAGGCCGGGCCGCCTGGTGATATCTTTCACTATGAATATCAGCAATCTGAGTATATG
rJMSF041D24+ TATGAGGCCGGGCCGCCTGGTGATATCTTTCACTATGAATATCAGCAATCTGAGTATATG
rJMFF034G09+ TATGAGGCCGGGCCGCCTGGTGATATCTTTCACTATGAATATCAGCAATCTGAGTATATG
rJMFF037O23+ TATGAGGCCGGGCCGCCTGGTGATATCTTTCACTATGAATATCAGCAATCTGAGTATATG
rJMFF025G20+ TATGAGGCCGGGCCGCCTGGTGATATCTTTCACTATGAATATCAGCAATCTGAGTATATG
rJMFF046K16+ TATGAGGCCGGGCCGCCTGGTGATATCTTTCACTATGAATATCAGCAATCTGAGTATATG
____________________________________________________________
consensus TATGAGGCCGGGCCGCCTGGTGATATCTTTCACTATGAATATCAGCAATCTGAGTATATG
. : . : . : . : . : . :
rJMFF001F16+ TATCA-CTATGATGTGGAGTCATCATACCATCATGGATATCATTACTAGAAGGAATGATA
rJMSF020I22+ TATCA-CTATGATGTGGAGTCATCATACCATCATGGATATCATTACTAGAAGGAATGATA
rJMSF042E02+ TATCAGCTATGATGTGGAGTCATCATACCNTCATGGATATCATTACTAGAAGGAATGATA
rJMSF041D24+ TATCA-CTATGATGTGGAGTCATCATACCATCATGGATATCATTACTAGAAGGAATGATA
rJMFF034G09+ TATCA-CTATGATGTGGAGTCATCATACCATCATGGATATCATTACTAGAAGGAATGATA
rJMFF037O23+ TATCA-CTATGATGTGGAGTCATCATACCATCATGGATATCATTACTAGAAGGAATGATA
rJMFF025G20+ TATCA-CTATGATGTGGAGTCATCATACCATCATGGATATCATTACTAGAAGGAATGATA
rJMFF046K16+ TATCA-CTATGATGTGGAGTCATCATACCATCATGGATATCATTACTAGAAGGAATGATA
____________________________________________________________
consensus TATCA-CTATGATGTGGAGTCATCATACCATCATGGATATCATTACTAGAAGGAATGATA
. : . : . : . : . : . :
rJMFF001F16+ GGTGAGTTCTTCTTAGATCTCTAACATAATTAATTAGTTTTAATTGTAAATTATCCCCT
rJMSF020I22+ GGTGAGTTCTTCTTAGATCTCTAACATAATTAATTAGTTTTAATTGTAAATTATCCCCTC
rJMSF042E02+ GGTGAGTTCTTNTTAGATCTCTAACATAATTAANTAGTTTTAATTGTAAATTATCCCCTC
rJMSF041D24+ GGTGAGTTCTTCTTAGATCTCTAACATAATTAATTAGTTTTAATTGTAAATTATCCCCTC
rJMFF034G09+ GGTGAGTTCTTCTTAGATCTCTAACATAATTAATTAGTTTTAATTGTAAATTATCCCCTC
rJMFF037O23+ GGTGAGTTCTTCTTAGATCTCTAACATAATTAATTAGTTTTAATTGTAAATTATCCCCTC
rJMFF025G20+ GGTGAGTTCTTCTTAGATCTCTAACATAATTAATTAGTTTTAATTGTAAATTATCCCCTC
rJMFF046K16+ GGTGAGTTCTTCTTAGATCTCTAACATAATTAATTAGTTTTAATTGTAAATTATCCCCTC
____________________________________________________________
consensus GGTGAGTTCTTCTTAGATCTCTAACATAATTAATTAGTTTTAATTGTAAATTATCCCCTC
. : . : . : . : . : . :
rJMSF020I22+ AGTGTAAATGCAAACTG
rJMSF042E02+ AGTGTAAATGCAAAC
rJMSF041D24+ AGTGTAAATGCAAACTGGTTTT
rJMFF034G09+ AGTGTAAATGCAAACTGGTTTT
rJMFF037O23+ AGTGTAAATGCAAACTGGTTTTTTAACAAGTTTTTAT
rJMFF025G20+ AG
rJMFF046K16+ AGTGTAAATGCAAACTGGTTTTTTAACAAGTTTTTATTTATATTATTGGATTGTTTTCGC
____________________________________________________________
consensus AGTGTAAATGCAAACTGGTTTTTTAACAAGTTTTTATTTATATTATTGGATTGTTTTCGC