Contig 005507:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017O11Sequence536005507 (14)ref|XP_008218676.1|2e-07PREDICTED: E3 ubiquitin-protein ligase At4g11680 isoform X2 [Prunus mume]807005507 (14)ref|XP_009611099.1|3e-99PREDICTED: E3 ubiquitin protein ligase RIE1-like [Nicotiana tomentosiformis]
JMFF042K10Sequence659005507 (14)ref|XP_007205483.1|4e-27hypothetical protein PRUPE_ppa008150mg [Prunus persica] gb|EMJ06682.1| hypotheti602005507 (14)ref|XP_009611099.1|2e-60PREDICTED: E3 ubiquitin protein ligase RIE1-like [Nicotiana tomentosiformis]
JMFF043M18Sequence633005507 (14)ref|XP_007205483.1|5e-25hypothetical protein PRUPE_ppa008150mg [Prunus persica] gb|EMJ06682.1| hypotheti577005507 (14)ref|XP_009611099.1|9e-54PREDICTED: E3 ubiquitin protein ligase RIE1-like [Nicotiana tomentosiformis]
JMSF035A12Sequence726005507 (14)ref|XP_009611099.1|2e-49PREDICTED: E3 ubiquitin protein ligase RIE1-like [Nicotiana tomentosiformis]774005507 (14)ref|XP_009611099.1|1e-98PREDICTED: E3 ubiquitin protein ligase RIE1-like [Nicotiana tomentosiformis]
JMSF036D11Sequence690005507 (14)ref|XP_009611099.1|5e-46PREDICTED: E3 ubiquitin protein ligase RIE1-like [Nicotiana tomentosiformis]660005507 (14)ref|XP_009611099.1|4e-86PREDICTED: E3 ubiquitin protein ligase RIE1-like [Nicotiana tomentosiformis]
JMSF044D05Sequence848005507 (14)ref|XP_009611099.1|5e-98PREDICTED: E3 ubiquitin protein ligase RIE1-like [Nicotiana tomentosiformis]707005507 (14)ref|XP_009611099.1|1e-94PREDICTED: E3 ubiquitin protein ligase RIE1-like [Nicotiana tomentosiformis]
JMSF048G22Sequence694005507 (14)ref|XP_009611099.1|4e-46PREDICTED: E3 ubiquitin protein ligase RIE1-like [Nicotiana tomentosiformis]775005507 (14)ref|XP_009611099.1|2e-99PREDICTED: E3 ubiquitin protein ligase RIE1-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF017O11- ACAGTAATCGAATATCATCTGTTGCTGGTTTCCTAATCT
JMFF043M18- ACAGTAATCGAATATCATCTGTTGCTGGTTTCCTAATCT
JMFF042K10- ACAGTAATCGAATATCATCTGTTGCTGGTTTCCTAATCT
                      ____________________________________________________________
consensus ACAGTAATCGAATATCATCTGTTGCTGGTTTCCTAATCT
 
. : . : . : . : . : . :
JMFF017O11- TAGGTGATGTGTGTTCCAAGAACCAGTTACTTTCAGCCTTTGCTTACATACTAAACAAAC
JMFF043M18- TAAGTGATGTGTGTTCCAAGAACCAGTTACTTTCAGCCTTTGCTTACATACTAAACAAAC
JMFF042K10- TAGGTGATGTGTGTTCCAAGAACCAGTTACTTTCAGCCTTTGCTTACATACTAAACAAAC
JMSF035A12- GTGATGTGTGTTCCAAGAACCAGTTACTTTCAGCCTTTGCTTACATACTAAACAAAC
JMSF036D11- AGCCTTTGCTTACATACTAAACAAAC
JMSF048G22- AGCCTTTGCTTACATACTAAACAAAC
                      ____________________________________________________________
consensus TAGGTGATGTGTGTTCCAAGAACCAGTTACTTTCAGCCTTTGCTTACATACTAAACAAAC
 
. : . : . : . : . : . :
JMFF017O11- CAAGAAATGGGGGGAAGTTAGGCCAACGGTTATAGTTTCAACTCCTTTCTTCAATTCAAT
JMFF043M18- CAAGAAATGGGGGGAAGTTAGGCCAACGGTTATAGTTTCAACTCCTTTCTTCAATTCAAT
JMFF042K10- CAAGAAATGGGGGGAAGTTAGGCCAACGGTTATAGTTTCAACTCCTTTCTTCAATTCAAT
JMSF035A12- CAAGAAATGGGGGGAAGTTAGGCCAACGGTTATAGTTTCAACTCCTTTCTTCAATTCAAT
JMSF036D11- CAAGAAAT-GGGGGAAGTTAGGCCAACGGTTATAGTTTCAACTCCTTTCTTCAATTCAAT
JMSF048G22- CAAGAAATGGGGGGAAGTTAGGCCAACGGTTATAGTTTCAACTCCTTTCTTCAATTCAAT
                      ____________________________________________________________
consensus CAAGAAATGGGGGGAAGTTAGGCCAACGGTTATAGTTTCAACTCCTTTCTTCAATTCAAT
 
. : . : . : . : . : . :
JMFF017O11- TTTCACT-TCAACTCAAAGCAAAGCTGCAGAAGAAGAGAGGTTTGATTCTTGGTCATCGT
JMFF043M18- TTTCACT-TCAACTCAAAGCAAAGCTGCAGAAGAAGAGAGGTTTGATTCTTGGTCATCGT
JMFF042K10- TNTAATTATGTGCTCAAAGCAAAGCTGCAGAAGAAGAGAGGTTTGATTCTTGGTCATCGT
JMSF035A12- TTTCACT-TCAACTCAAAGCAAAGCTGCAGAAGAAGAGAGGTTTGATTCTTGGTCATCGT
JMSF036D11- TTTCACT-TCAACTCAAAGCAAAGCTGCAGAAGAAGAGAGGTTTGATTCTTGGTCATCGT
JMSF048G22- TTTCACT-TCAACTCAAAGCAAAGCTGCAGAAGAAGAGAGGTTTGATTCTTGGTCATCGT
                      ____________________________________________________________
consensus TTTCACT-TCAACTCAAAGCAAAGCTGCAGAAGAAGAGAGGTTTGATTCTTGGTCATCGT
 
. : . : . : . : . : . :
JMFF017O11- CTCTACCAATCTTCACCTTCCCTGCTGTTCCTCTGTCCTTTTATTCCCCTCTCTGTTCCC
JMFF043M18- CTCTACCAATCTTCACCTTCCCTGCTGTTCCTCTGTCCTTTTATTCCCCTCTCTGTTCCC
JMFF042K10- CTCTACCAATCTTCACCTTCCCTGCTGTTCCTCTGTCCTTTTATTCCCCTCTCTGTTCCC
JMSF035A12- CTCTACCAATCTTCACCTTCCCTGCTGTTCCTCTGTCCTTTTATTCCCCTCTCTGCTCCC
JMSF036D11- CTCTACCAATCTTCACCTTCCCTGCTGTTCCTCTGTCCTTTTATTCCCCTCTCTGCTCCC
JMSF048G22- CTCTACCAATCTTCACCTTCCCTGCTGTTCCTCTGTCCTTTTATTCCCCTCTCTGCTCCC
JMSF044D05- CAATCTTCACCTTCCCTGCTGTTCCTCTGTCCTTTTATTCACCTCTCTGCTCCC
                      ____________________________________________________________
consensus CTCTACCAATCTTCACCTTCCCTGCTGTTCCTCTGTCCTTTTATTCCCCTCTCTGCTCCC
 
. : . : . : . : . : . :
JMFF017O11- CCTTCTTCAAAATCCAGAGGCCGAGTTATGTTATTTTTCATATAGATTCTTGGTTGATCG
JMFF043M18- CCTTCTTCAAAATCCAGAGGCCGAGTTATGTTATTTTTCATATAGATTCTTGGTTGATCG
JMFF042K10- CCTTCTTCAAAATCCAGAGGCCGAGTTATGTTATTTTTCATATAGATTCTTGGTTGATCG
JMSF035A12- CCTTCTTCAAAATCCAGAGGCCGAGTTATGTTATTTTTCATATAGATTCTTGGTTGATCG
JMSF036D11- CCTTCTTCAAAATCCAGAGGCCGAGTTATGTTATTTTTCATATAGATTCTTGGTTGATCG
JMSF048G22- CCTTCTTCAAAATCCAGAGGCCGAGTTATGTTATTTTTCATATAGATTCTTGGTTGATCG
JMSF044D05- CCTTCTTCAAAATCCAGAGGCCGAGTTATGTTATTTTTCATATAGATTCTTGGTTGATCG
                      ____________________________________________________________
consensus CCTTCTTCAAAATCCAGAGGCCGAGTTATGTTATTTTTCATATAGATTCTTGGTTGATCG
 
. : . : . : . : . : . :
JMFF017O11- AGCGAATATGAATATGAATAATCGTGGGTTGTTAACGACAGACTCGTTTTGTAACTCCGG
JMFF043M18- AGCGAATATGAATATGAATAATCGTGGGTTGTTAACGACAGACTCGTTTTGTAACTCCGG
JMFF042K10- AGCGAATATGAATATGAATAATCGTGGGTTGTTAACGACAGACTCGTTTTGTAACTCCGG
JMSF035A12- AGCGAATATGAATATGAATAATCGTGGGTTGTTAACGACAGACTCGTTTTGTAACTCCGG
JMSF036D11- AGCGAATATGAATATGAATAATCGTGGGTTGTTAACGACAGACTCGTTTTGTAACTCCGG
JMSF048G22- AGCGAATATGAATATGAATAATCGTGGGTTGTTAACGACAGACTCGTTTTGTAACTCCGG
JMSF044D05- AGCGAATATGAATATGAATAATCGTGGGTTGTTAACGACAGACTCGTTTTGTAACTCCGG
                      ____________________________________________________________
consensus AGCGAATATGAATATGAATAATCGTGGGTTGTTAACGACAGACTCGTTTTGTAACTCCGG
 
. : . : . : . : . : . :
JMFF017O11- GGCTGCAGCCACTTCGGGCGAAGATACGATGATGTCTGTGGTTGCAAGAACCCAGAGCCA
JMFF043M18- GGCTGCAGCCACTTCGGGCGAAGATACGATGATGTCTGTGGTTGCAAGAACCCAGAGCCA
JMFF042K10- GGCTGCAGCCACTTCGGGCGAAGATACGATGATGTCTGTGGTTGCAAGAACCCAGAGCCA
JMSF035A12- GGCTGCAGCCACTTCGGGCGAAGATACGATGATGTCTGTGGTTGCAAGAACCCAGAGCCA
JMSF036D11- GGCTGCAGCCACTTCGGGCGAAGATACGATGATGTCTGTGGTTGCAAGAACCCAGAGCCA
JMSF048G22- GGCTGCAGCCACTTCGGGCGAAGATACGATGATGTCTGTGGTTGCAAGAACCCAGAGCCA
JMSF044D05- GGCTGCAGCCACTTCGGGCGAAGATACGATGATGTCTGTGGTTGCAAGAACCCAGAGCCA
                      ____________________________________________________________
consensus GGCTGCAGCCACTTCGGGCGAAGATACGATGATGTCTGTGGTTGCAAGAACCCAGAGCCA
 
. : . : . : . : . : . :
JMFF017O11- GTCAAGAACACAGCCTTCTCCTTTCATGGTGAGAGTGGCAATGAGAATATCGAGAGCGAG
JMFF043M18- GTCAAGAACACAGCCTTCTCCTTTCATGGTGAGAGTGGCAATGAGAATATCGAGAGCGAG
JMFF042K10- GTCAAGAACACAGCCTTCTCCTTTCATGGTGAGAGTGGCAATGAGAATATCGAGAGCGAG
JMSF035A12- GTCAAGAACACAGCCTTCTCCTTTCATGGTGAGAGTGGCAATGAGAATATCGAGAGCGAG
JMSF036D11- GTCAAGAACACAGCCTTCTCCTTTCATGGTGAGAGTGGCAATGAGAATATCGAGAGCGAG
JMSF048G22- GTCAAGAACACAGCCTTCTCCTTTCATGGTGAGAGTGGCAATGAGAATATCGAGAGCGAG
JMSF044D05- GTCAAGAACACAGCCTTCTCCTTTCATGGTGAGAGTGGCAATGAGAATATCGAGAGCGAG
                      ____________________________________________________________
consensus GTCAAGAACACAGCCTTCTCCTTTCATGGTGAGAGTGGCAATGAGAATATCGAGAGCGAG
 
. : . : . : . : . : . :
JMFF017O11- GTGGTTCATCTTCCTGAG
JMFF043M18- GTGGTTCATCTTCCTGAGAAGAGTGTTTCACTACCAGAATGGATCAACAACGTCTGATCT
JMFF042K10- GTGGTTCATCTTCCTGAGAAGAGTGTTTCACTACCAGAATGGATCAACAACGTCTGATCT
JMSF035A12- GTGGTTCATCTTCCTGAGAAGAGTGTTTCACTACCAGAATGGATCAACAACGTCTGATCT
JMSF036D11- GTGGTTCATCTTCCTGAGAAGAGTGTTTCACTACCAGAATGGATCAACAACGTCTGATCT
JMSF048G22- GTGGTTCATCTTCCTGAGAAGAGTGTTTCACTACCAGAATGGATCAACAACGTCTGATCT
JMSF044D05- GTGGTTCATCTTCCTGAGAAGAGTGTTTCACTACCAGAATGGATCAACAACGTCTGATCT
                      ____________________________________________________________
consensus GTGGTTCATCTTCCTGAGAAGAGTGTTTCACTACCAGAATGGATCAACAACGTCTGATCT
 
. : . : . : . : . : . :
JMFF043M18- CGGGTCGAATCCGTTCAATTCCCTGACTTGGATGATGATGGAGTGTGTAACTTTG
JMFF042K10- CGGGTCGAATCCGTTCAATTCCCTGACTTGGATGATGATGGAGTGTGTAACTTTGAGTGT
JMSF035A12- CGGGTCGAATCCGTTCAATTCCCTGACTTGGATGATGATGGAGTGTGTAACTTTGAGTGT
JMSF036D11- CGGGTCGAATCCGTTCAATTCCCTGACTTGGATGATGATGGAGTGTGTAACTTTGAGTGT
JMSF048G22- CGGGTCGAATCCGTTCAATTCCCTGACTTGGATGATGATGGAGTGTGTAACTTTGAGTGT
JMSF044D05- CGGGTCGAATCCGTTCAATTCCCTGACTTGGATGATGATGGAGTGTGTAACTTTGAGTGT
                      ____________________________________________________________
consensus CGGGTCGAATCCGTTCAATTCCCTGACTTGGATGATGATGGAGTGTGTAACTTTGAGTGT
 
. : . : . : . : . : . :
JMFF042K10- CCAAATCATGTTTACAGCAT
JMSF035A12- CCAAATCATGTTTACAGCATATACCCTGGCTGTCTCAAAGGAGGAAAGGCCTGTTTGGCC
JMSF036D11- CCAAATCATGTTTACAGCATATACCCTGGCTGTCTCAAAGGAGGAAAGGCCTGTTTGGCC
JMSF048G22- CCAAATCATGTTTACAGCATATACCCTGGCTGTCTCAAAGGAGGAAAGGCCTGTTTGGCC
JMSF044D05- CCAAATCATGTTTACAGCATATACCCTGGCTGTCTCAAAGGAGGAAAGGCCTGTTTGGCC
                      ____________________________________________________________
consensus CCAAATCATGTTTACAGCATATACCCTGGCTGTCTCAAAGGAGGAAAGGCCTGTTTGGCC
 
. : . : . : . : . : . :
JMSF035A12- GATGCGAATTTGGGTTTCGGGCTATGCTTTTGGCTGTCTGCTTAGCCNTTTGCTACTCTA
JMSF036D11- GATGCGAATTTGGGTTTCGGGCTATGCTTTTGGCTGTCTGCTTAGCCTTTTGCTACTCTA
JMSF048G22- GATGCGAATTTGGGTTTCGGGCTATGCTTTTGGCTGTCTGCTTAGCCTTTTGCTACTCTA
JMSF044D05- GATGCGAATTTGGGTTTCGGGCTATGCTTTTGGCTGTCTGCTTAGCCTTTTGCTACTCTA
                      ____________________________________________________________
consensus GATGCGAATTTGGGTTTCGGGCTATGCTTTTGGCTGTCTGCTTAGCCTTTTGCTACTCTA
 
. : . : . : . : . : . :
JMSF035A12- CTGCA
JMSF036D11- CTGCA
JMSF048G22- CTGCA
JMSF044D05- CTGCAGATATTGGGTGTTCTATCTGAGGCAGAGAGATGAGTCTTCTGCAGTATCTGATAT
rJMSF048G22+ GAGGCAGAGAGATGAGTCTTCTGCAGTATCTGATAT
rJMSF035A12+ GAGGCAGAGAGATGAGTTTTCTGCAGTATNTGATAT
rJMFF017O11+ GAGGCAGAGAGATGAGTCTTCTGCAGTATCTGATAT
                      ____________________________________________________________
consensus CTGCAGATATTGGGTGTTCTATCTGAGGCAGAGAGATGAGTCTTCTGCAGTATCTGATAT
 
. : . : . : . : . : . :
JMSF044D05- AGAGCAGCAAAGAAGCCTTGAGGGATCAAGTGTGCAAATGGTGGAGAAATGCAGGACCTG
rJMSF044D05+ GTGCAAATGGTGGAGAAATGCAGGACCTG
rJMSF048G22+ AGAGCAGCAAAGAAGCCTTGAGGGATCAAGTGTGCAAATGGTGGAGAAATGCAGGACCTG
rJMSF035A12+ AGAGCAGCAAAGAAGCCNTGAGGGATCAAGTGTGCAAATGGTGGAGAAATGCAGGACCTG
rJMFF017O11+ AGAGCAGCAAAGAAGCCTTGAGGGATCAAGTGTGCAAATGGTGGAGAAATGCAGGACCTG
                      ____________________________________________________________
consensus AGAGCAGCAAAGAAGCCTTGAGGGATCAAGTGTGCAAATGGTGGAGAAATGCAGGACCTG
 
. : . : . : . : . : . :
JMSF044D05- CGTTGAGCTATTCTTCGCGATATGGTTCGTGATGGGGAACGTTTGGGTGTTTGACACGCG
rJMSF044D05+ CGTTGAGCTATTCTTCGCGATATGGTTCGTGATGGGGAACGTTTGGGTGTTTGACACGCG
rJMSF048G22+ CGTTGAGCTATTCTTCGCGATATGGTTCGTGATGGGGAACGTTTGGGTGTTTGACACGCG
rJMSF035A12+ CGTTGAGCTATTCTTCGCGATATGGTTCGTGATGGGGAACGTTTGGGTGTTTGACACGCG
rJMSF036D11+ GCGATATGGTTCGTGATGGGGAACGTTTGGGTGTTTGACACGCG
rJMFF017O11+ CGTTGAGCTATTCTTCGCGATATGGTTCGTGATGGGGAACGTTTGGGTGTTTGACACGCG
                      ____________________________________________________________
consensus CGTTGAGCTATTCTTCGCGATATGGTTCGTGATGGGGAACGTTTGGGTGTTTGACACGCG
 
. : . : . : . : . : . :
JMSF044D05- ATTTGGATCGTTTCGTCGTGCCCCAAAGCTCCATGTTCTATGCATCTCTCTGCTGGCCTG
rJMSF044D05+ ATTTGGATCGTTTCGTCGTGCCCCAAAGCTCCATGTTCTATGCATCTCTCTGCTGGCCTG
rJMSF048G22+ ATTTGGATCGTTTCGTCGTGCCCCAAAGCTCCATGTTCTATGCATCTCTCTGCTGGCCTG
rJMSF035A12+ ATTTGGATCGTTTCGTCGTGCCCCAAAGCTCCATGTTCTATGCATCTCTCTGCTGGCCTG
rJMSF036D11+ ATTTGGATCGTTTCGTCGTGCCCCAAAGCTCCATGTTCTATGCATCTCTCTGCTGGCCTG
rJMFF017O11+ ATTTGGATCGTTTCGTCGTGCCCCAAAGCTCCATGTTCTATGCATCTCTCTGCTGGCCTG
rJMFF042K10+ CTG
                      ____________________________________________________________
consensus ATTTGGATCGTTTCGTCGTGCCCCAAAGCTCCATGTTCTATGCATCTCTCTGCTGGCCTG
 
. : . : . : . : . : . :
JMSF044D05- GAATGCTGTCACCTACTCATTCCCATTCATTCTGTTGGTGGTGCTGTGCTGCTGTGTGCC
rJMSF044D05+ GAATGCTGTCACCTACTCATTCCCATTCATTCTGTTTGTGGTGCTGTGCTGCTGTGTGCC
rJMSF048G22+ GAATGCTGTCACCTACTCATTCCCATTCATTCTGTTTGTGGTGCTGTGCTGCTGTGTGCC
rJMSF035A12+ GAATGCTGTCACCTACTCATTCCCATTCATTCTGTTTGTGGTGCTGTGCTGCTGTGTGCC
rJMSF036D11+ GAATGCTGTCACCTACTCATTCCCATTCATTCTGTTTGTGGTGCTGTGCTGCTGTGTGCC
rJMFF017O11+ GAATGCTGTCACCTACTCATTCCCATTCATTCTGTTTGTGGTGCTGTGCTGCTGTGTGCC
rJMFF042K10+ GAATGCTGTCACCTACTCATTCCCATTCATTCTGTTTGTGGTGCTGTGCTGCTGTGTGCC
rJMFF043M18+ CCATTCATTCTGTTTGTGGTGCTGTGCTGCTGTGTGCC
                      ____________________________________________________________
consensus GAATGCTGTCACCTACTCATTCCCATTCATTCTGTTTGTGGTGCTGTGCTGCTGTGTGCC
 
. : . : . : . : . : . :
JMSF044D05- CATGGTTAGCA
rJMSF044D05+ CATGGTTAGCAGCTTCCTAGGATACAACATGAACATGGGATCTGTCGAGCGGGGGGCATC
rJMSF048G22+ CATGGTTAGCAGCTTCCTAGGATACAACATGAACATGGGATCTGTCGAGCGGGGGGCATC
rJMSF035A12+ CATGGTTAGCAGCTTCCTAGGATACAACATGAACATGGGATCTGTCGAGCGGGGGGCATC
rJMSF036D11+ CATGGTTAGCAGCTTCCTAGGATACAACATGAACATGGGATCTGTCGAGCGGGGGGCATC
rJMFF017O11+ CATGGTTAGCAGCTTCCTAGGATACAACATGAACATGGGATCTGTCGAGCGGGGGGCATC
rJMFF042K10+ CATGGTTAGCAGCTTCCTAGGATACAACATGAACATGGGATCTGTCGAGCGGGGGGCATC
rJMFF043M18+ CATGGTTAGCAGCTTCCTAGGATACAACATGAACATGGGATCTGTCGAGCGGGGGGCATC
                      ____________________________________________________________
consensus CATGGTTAGCAGCTTCCTAGGATACAACATGAACATGGGATCTGTCGAGCGGGGGGCATC
 
. : . : . : . : . : . :
rJMSF044D05+ CAATGAACAGCTCTCTAGTTTGCCAACCTGGAAGTACAAGCAAGTCTGCAACAACCCAGA
rJMSF048G22+ CAATGAACAGCTCTCTAGTTTGCCAACCTGGAAGTACAAGCAAGTCTGCAACAACCCAGA
rJMSF035A12+ CAATGAACAGCTCTCTAGTTTGCCAACCTGGAAGTACAAGCAAGTCTGCAACAACCCAGA
rJMSF036D11+ CAATGAACAGCTCTCTAGTTTGCCAACCTGGAAGTACAAGCAAGTCTGCAACAACCCAGA
rJMFF017O11+ CAATGAACAGCTCTCTAGTTTGCCAACCTGGAAGTACAAGCAAGTCTGCAACAACCCAGA
rJMFF042K10+ CAATGAACAGCTCTCTAGTTTGCCAACCTGGAAGTACAAGCAAGTCTGCAACAACCCAGA
rJMFF043M18+ CAATGAACAGCTCTCTAGTTTGCCAACCTGGAAGTACAAGCAAGTCTGCAACAACCCAGA
                      ____________________________________________________________
consensus CAATGAACAGCTCTCTAGTTTGCCAACCTGGAAGTACAAGCAAGTCTGCAACAACCCAGA
 
. : . : . : . : . : . :
rJMSF044D05+ TTTGGAGAATGAAAATCCAGAATGCTGCATTTGCTTAGCACAGTATCGTGACAAGGAAGA
rJMSF048G22+ TTTGGAGAATGAAAATCCAGAATGCTGCATTTGCTTAGCACAGTATCGTGACAAGGAAGA
rJMSF035A12+ TTTGGAGAATGAAAATCCAGAATGCTGCATTTGCTTAGCACAGTATCGTGACAAGGAAGA
rJMSF036D11+ TTTGGAGAATGAAAATCCAGAATGCTGCATTTGCTTAGCACAGTATCGTGACAAGGAAGA
rJMFF017O11+ TTTGGAGAATGAAAATCCAGAATGCTGCATTTGCTTAGCACAGTATCGTGACAAGGAAGA
rJMFF042K10+ TTTGGAGAATGAAAATCCAGAATGCTGCATTTGCTTAGCACAGTATCGTGACAAGGAAGA
rJMFF043M18+ TTTGGAGAATGAAAATCCAGAATGCTGCATTTGCTTAGCACAGTATCGTGACAAGGAAGA
                      ____________________________________________________________
consensus TTTGGAGAATGAAAATCCAGAATGCTGCATTTGCTTAGCACAGTATCGTGACAAGGAAGA
 
. : . : . : . : . : . :
rJMSF044D05+ AATGAGACAACTGCCATGTTCCCATGTATTTCATCTCAACTGTGTTGATCAATGGCTCAG
rJMSF048G22+ AATGAGACAACTGCCATGTTCCCATGTATTTCATCTCAACTGTGTTGATCAATGGCTCAG
rJMSF035A12+ AATGAGACAACTGCCATGTTCCCATGTATTTCATCTCAACTGTGTTGATCAATGGCTCAG
rJMSF036D11+ AATGAGACAACTGCCATGTTCCCATGTATTTCATCTCAACTGTGTTGATCAATGGCTCAG
rJMFF017O11+ AATGAGACAACTGCCATGTTCCCATGTATTTCATCTCAACTGTGTTGATCAATGGCTCAG
rJMFF042K10+ AATGAGACAACTGCCATGTTCCCATGTATTTCATCTCAACTGTGTTGATCAATGGCTCAG
rJMFF043M18+ AATGAGACAACTGCCATGTTCCCATGTATTTCATCTCAACTGTGTTGATCAATGGCTCAG
                      ____________________________________________________________
consensus AATGAGACAACTGCCATGTTCCCATGTATTTCATCTCAACTGTGTTGATCAATGGCTCAG
 
. : . : . : . : . : . :
rJMSF044D05+ AATCATATCTTGCTGCCCTCTCTGTAAAAAGGATTTAGCTAGATAGATGAAGTCACGATG
rJMSF048G22+ AATCATATCTTGCTGCCCTCTCTGTAAAAAGGATTTAGCTAGATAGATGAAGTCACGATG
rJMSF035A12+ AATCATATCTTGCTGCCCTCTCTGTAAAAAGGATTTAGCTAGATAGATGAAGTCACGATG
rJMSF036D11+ AATCATATCTTGCTGCCCTCTCTGTAAAAAGGATTTAGCTAGATAGATGAAGTCACGATG
rJMFF017O11+ AATCATATCTTGCTGCCCTCTCTGTAAAAAGGATTTAGCTAGATAGATGAAGTCACGATG
rJMFF042K10+ AATCATATCTTGCTGCCCTCTCTGTAAAAAGGATTTAGCTAGATAGATGAAGTCACGATG
rJMFF043M18+ AATCATATCTTGCTGCCCTCTCTGTAAAAAGGATTTAGCTAGATAGATGAAGTCACGATG
                      ____________________________________________________________
consensus AATCATATCTTGCTGCCCTCTCTGTAAAAAGGATTTAGCTAGATAGATGAAGTCACGATG
 
. : . : . : . : . : . :
rJMSF044D05+ ATGATGCTAGGTTTCCCTGCATTTTTTTTTCTTAATTTTATTTTCTGATACATACATAAT
rJMSF048G22+ ATGATGCTAGGTTTCCCTGCA-TTTTTTTTCTTAATTTTATTTTCTGATACATACATAAT
rJMSF035A12+ ATGATGCTAGGTTTCCCTGCA-TTTTTTTTCTTAATTTTATTTTCTGATACATACATAAT
rJMSF036D11+ ATGATGCTAGGTTTCCCTGCA-TTTTTTTTCTTAATTTTATTTTCTGATACATACATAAT
rJMFF017O11+ ATGATGCTAGGTTTCCCTGCA-TTTTTTTTCTTAATTTTATTTTCTGATACATACATAAT
rJMFF042K10+ ATGATGCTAGGTTTCCCTGCA-TTTTTTTTCTTAATTTTATTTTCTGATACATACATAAT
rJMFF043M18+ ATGATGCTAGGTTTCCCTGCA-TTTTTTTTCTTAATTTTATTTTCTGATACATACATAAT
                      ____________________________________________________________
consensus ATGATGCTAGGTTTCCCTGCA-TTTTTTTTCTTAATTTTATTTTCTGATACATACATAAT
 
. : . : . : . : . : . :
rJMSF044D05+ TAAACAAGCATAAAGGGAAGATATATAATTGTATGTAATGTAATAGAGTGAGGAAAATCA
rJMSF048G22+ TAAACAAGCATAAAGGGAAGATATATAATTGTATGTAATGTAATAGAGTGAGGAAAATCA
rJMSF035A12+ TAAACAAGCATAAAGGGAAGATATATAATTGTATGTAATGTAATAGAGTGAGGAAAATCA
rJMSF036D11+ TAAACAAGCATAAAGGGAAGATATATAATTGTATGTAATGTAATAGAGTGAGGAAAATCA
rJMFF017O11+ TAAACAAGCATAAAGGGAAGATATATAATTGTATGTAATGTAATAGAGTGAGGAAAATCA
rJMFF042K10+ TAAACAAGCATAAAGGGAAGATATATAATTGTATGTAATGTAATAGAGTGAGGAAAATCA
rJMFF043M18+ TAAACAAGCATAAAGGGAAGATATATAATTGTATGTAATGTAATAGAGTGAGGAAAATCA
                      ____________________________________________________________
consensus TAAACAAGCATAAAGGGAAGATATATAATTGTATGTAATGTAATAGAGTGAGGAAAATCA
 
. : . : . : . : . : . :
rJMSF044D05+ TGTTGAAAGTGGAAGATCTGAACTTGTTTCATTTGAGTGGGGAGACTGCCATCCATCTCT
rJMSF048G22+ TGTTGAAAGTGGAAGATCTGAACTTGTTTCATTTGAGTGGGGAGACTGCCATCCATCTCT
rJMSF035A12+ TGTTGAAAGTGGAAGATCTGAACTTGTTTCATTTGAGTGGGGAGACTGCCATCCATCTCT
rJMSF036D11+ TGTTGAAAGTGGAAGATCTGAACTTGTTTCATTTGAGTGGGGAGACTGCCATCCATCTCT
rJMFF017O11+ TGTTGAAAGTGGAAGATCTGAACTTGTTTCATTTGAGTGGGAAGACTGCCATCCATCTCT
rJMFF042K10+ TGTTGAAAGTGGAAGATCTGAACTTGTTTCATTTGAGTGGGAAGACTGCCATCCATCTCT
rJMFF043M18+ TGTTGAAAGTGGAAGATCTGAACTTGTTTCATTTGAGTGGGAAGACTGCCATCCATCTCT
                      ____________________________________________________________
consensus TGTTGAAAGTGGAAGATCTGAACTTGTTTCATTTGAGTGGGGAGACTGCCATCCATCTCT
 
. : . : . : . : . : . :
rJMSF044D05+ CCCAAGTCCC
rJMSF048G22+ CCCAAGTCCCAAATACT
rJMSF035A12+ CCCAAGTCCCAAATACT
rJMSF036D11+ CCCAAGTCCCAAATACT
rJMFF017O11+ CCCAAGTCCCAAATACTTGTAAATGTTAAAATAGTCTCAATGCAAAA
rJMFF042K10+ CCCAAGTCCCAAATACTTGTAAATGTTAAAATAGTCTCAATGCAAAATGTTCAAAGAATC
rJMFF043M18+ CCCAAGTCCCAAATACTTGTAAATGTTAAAATAGTCTCAATGCAAAATGTTCAAAGAATC
                      ____________________________________________________________
consensus CCCAAGTCCCAAATACTTGTAAATGTTAAAATAGTCTCAATGCAAAATGTTCAAAGAATC