Contig 005494:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006F22Sequence557000602 (4)emb|CDO99362.1|7e-64unnamed protein product [Coffea canephora]449005494 (3)ref|XP_004147178.1|64.7PREDICTED: ammonium transporter 1 member 1-like [Cucumis sativus] ref|XP_0041667
JMFF042A10Sequence655000602 (4)emb|CDO99362.1|7e-86unnamed protein product [Coffea canephora]309005494 (3)
JMSF030P02Sequence642000602 (4)ref|XP_006340957.1|173PREDICTED: ammonium transporter 1 member 1-like, partial [Solanum tuberosum]461005494 (3)ref|XP_006420410.1|3e-28hypothetical protein CICLE_v10004812mg [Citrus clementina] gb|ESR33650.1| hypoth

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF030P02+ CGGCGGGTNTGGGGCNTGGGGAATCA
                      ____________________________________________________________
consensus CGGCGGGTNTGGGGCNTGGGGAATCA
 
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rJMSF030P02+ TTTTCNCCNCNCTTTTNGCCAAGGAAAAGTACGTGAACGAGGTTTACCNGGGGAAACCGG
                      ____________________________________________________________
consensus TTTTCNCCNCNCTTTTNGCCAAGGAAAAGTACGTGAACGAGGTTTACCNGGGGAAACCGG
 
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rJMSF030P02+ GTNGGCCTCNCGGGCTGTTCATGGGCGGCGGCGGGAGGCTACTCGGGGCGCNCGTGATCC
                      ____________________________________________________________
consensus GTNGGCCTCNCGGGCTGTTCATGGGCGGCGGCGGGAGGCTACTCGGGGCGCNCGTGATCC
 
. : . : . : . : . : . :
rJMSF030P02+ NGATTTTGGTGATATTNGGGNGGGTCNCCNCCNCCNTGGGTCCTNTGTTTTACNTTNTTC
rJMFF006F22+ GGGTCCTTTGTTTTACNTTTTTC
                      ____________________________________________________________
consensus NGATTTTGGTGATATTNGGGNGGGTCNCCNCCNCCNTGGGTCCTTTGTTTTACNTTTTTC
 
. : . : . : . : . : . :
rJMSF030P02+ ATAAGCTGAAANTGCTCCGGATNTNGGAGGAAGACGAATTGGCGGGTATGGATATGACCC
rJMFF006F22+ ATAANNTGAAANTGCTCCGGATTTNGGAGGAANACGAATTGGCGGGTNTGGATNTGACCC
                      ____________________________________________________________
consensus ATAAGCTGAAANTGCTCCGGATTTNGGAGGAAGACGAATTGGCGGGTATGGATATGACCC
 
. : . : . : . : . : . :
rJMSF030P02+ GACNTGGAGGGTTTGCTTATGTTTACCNTGATGAAGATGATCNCAAAACNGGGATCCAAA
rJMFF006F22+ GACNTGGNGGGTTTGNTTNTGTTTTCCNTGATGAAGATGATCCCAAAACNGGGATCCNAA
                      ____________________________________________________________
consensus GACNTGGAGGGTTTGCTTATGTTTTCCNTGATGAAGATGATCCCAAAACNGGGATCCAAA
 
. : . : . : . : . : . :
rJMSF030P02+ TGAGGNGGATTGAACCCNCAGCTNTTTCAAGTTAGAAGAAATTTCAATTCCCNTA-TTTT
rJMFF006F22+ TGNGGNGGNTTGAACCCNCAGCTTTTTCAANTTNGAANAAATTTCAATTCCCATATTTTT
rJMFF042A10+ TTGAACCCCCAGCTCTTTCAAGTTAGAAGAAATTTCAATTCCCAAATTTTT
                      ____________________________________________________________
consensus TGAGGNGGATTGAACCCCCAGCTTTTTCAAGTTAGAAGAAATTTCAATTCCCATATTTTT
 
. : . : . : . : . : . :
rJMSF030P02+ TTTTTTACTTCCTTTCATTTTCATTAGAATTTTCAACGTTTGGAAAGTAGTATGCATATT
rJMFF006F22+ TTTTTTACTTCCTTTCATTTTCATTAGAATTTTCAACGTTTGGAAAGTAGTATGCATATT
rJMFF042A10+ TTTTTTACTTCCTTTCATTTTCATTAGAATTTTCAACGTTTGGAAAGTAGTATGCATATT
                      ____________________________________________________________
consensus TTTTTTACTTCCTTTCATTTTCATTAGAATTTTCAACGTTTGGAAAGTAGTATGCATATT
 
. : . : . : . : . : . :
rJMSF030P02+ AGAATTATAAAGTTT
rJMFF006F22+ AGAATTATAAAGTTTTAAAATTTATAAAAAAAAAAGGTAGTTATCATGGGAATTGAAAAT
rJMFF042A10+ AGAATTATAAAGTTTTAAAATTTATAAAAAAAAAAGGTAGTTATCATGGGAATTGAAAAT
                      ____________________________________________________________
consensus AGAATTATAAAGTTTTAAAATTTATAAAAAAAAAAGGTAGTTATCATGGGAATTGAAAAT
 
. : . : . : . : . : . :
rJMFF006F22+ TCTTAATTTGTTTGTGGTTGTGGTTGTGGATGAAGATAATGAATGTCGTCTT
rJMFF042A10+ TCTTAATTTGTTTGTGGTTGTGGTTGTGGATGAAAATAATGAATGTCGTCTTCCCCTTXX
                      ____________________________________________________________
consensus TCTTAATTTGTTTGTGGTTGTGGTTGTGGATGAAGATAATGAATGTCGTCTTCCCCTTNN
 
. : . : . : . : . : . :
rJMFF042A10+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAAAAAAAAAAAAAAACTCTCCAGGG
                      ____________________________________________________________
consensus NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAAAAAAAAAAAAAAACTCTCCAGGG