Contig 005488:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022E15Sequence489006450 (5)758005488 (5)emb|CBI27739.3|3e-85unnamed protein product [Vitis vinifera]
JMFF041B04Sequence637006450 (5)619005488 (5)ref|XP_006474551.1|169PREDICTED: uncharacterized protein LOC102608026 [Citrus sinensis]
JMSF014I02Sequence477006450 (5)747005488 (5)emb|CBI27739.3|2e-63unnamed protein product [Vitis vinifera]
JMSF019E12Sequence532006450 (5)771005488 (5)emb|CBI27739.3|2e-95unnamed protein product [Vitis vinifera]
JMSF019G03Sequence234006450 (5)672005488 (5)emb|CBI27739.3|8e-75unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF019E12+ CTCCAGGGATGAAGCTGATATTCGTGTTCATGAATTCT
                      ____________________________________________________________
consensus CTCCAGGGATGAAGCTGATATTCGTGTTCATGAATTCT
 
. : . : . : . : . : . :
rJMSF019E12+ TCAAGACATGTTATTTCAAAAAAGGGATACATCCAATTCCAGGTGCTAAGCAAGCTCTGC
                      ____________________________________________________________
consensus TCAAGACATGTTATTTCAAAAAAGGGATACATCCAATTCCAGGTGCTAAGCAAGCTCTGC
 
. : . : . : . : . : . :
rJMSF014I02+ GTCCCGACAAAATGCAATTAAAG
rJMSF019E12+ AAAACTTATCCAGATTCTGCAACCTTTCAATAGTTACGTCCCGACAAAATGCAATTAAAG
rJMSF019G03+ GTCCCGACAAAATGCAATTAAAG
                      ____________________________________________________________
consensus AAAACTTATCCAGATTCTGCAACCTTTCAATAGTTACGTCCCGACAAAATGCAATTAAAG
 
. : . : . : . : . : . :
rJMSF014I02+ ATCACACAGTTAAGTGGATTGAGAACCATTATCCTGGTCTTTTTCAAAATATTCACTTTG
rJMSF019E12+ ATCACACAGTTAAGTGGATTGAGAACCATTATCCTGGTCTTTTTCAAAATATTCACTTTG
rJMSF019G03+ ATCACACAGTTAAGTGGATTGAGAACCATTATCCTGGTCTTTTTCAAAATATTCACTTTG
rJMFF041B04+ TTTTCAAAATATTCACTTTG
                      ____________________________________________________________
consensus ATCACACAGTTAAGTGGATTGAGAACCATTATCCTGGTCTTTTTCAAAATATTCACTTTG
 
. : . : . : . : . : . :
rJMSF014I02+ GAAATCATTTTGCTTTAAATGGAAAGTCCATACCAAAATCAGAAATTTGCAGGTCACTCG
rJMSF019E12+ GAAATCATTTTGCTTTAAATGGAAAGTCCATACCAAAATCAGAAATTTGCAGGTCACTCG
rJMSF019G03+ GAAATCATTTTGCTTTAAATGGAAAGTCCATACCAAAATCAGAAATTTGCAGGTCACTCG
rJMFF022E15+ G
rJMFF041B04+ GAAATCATTNTGCTTTAAATGGAAAGTCCATACCAAAATCAGAAATTTGCAGGTCACTCG
                      ____________________________________________________________
consensus GAAATCATTTTGCTTTAAATGGAAAGTCCATACCAAAATCAGAAATTTGCAGGTCACTCG
 
. : . : . : . : . : . :
rJMSF014I02+ GAGCAAAAGTTTTGATCGATGATAATCCAAGATATGCCATCGAGTGTGCTGAAGTTGGAA
rJMSF019E12+ GAGCAAAAGTTTTGATCGATGATAATCCAAGATATGCCATCGAGTGTGCTGAAGTTGGAA
rJMSF019G03+ GAGCAAAAGTTTTGATCGATGATAATCCAAGATATGCCATCGAGTGTGCTGAAGTTGGAA
rJMFF022E15+ GAGCAAAAGTTTTGATCGATGATAATCCAAGATATGCCATCGAGTGTGCTGAAGTTGGAA
rJMFF041B04+ GAGCAAAAGTTTTGATCGATGATAATCCAAGATATGCCATCGAGTGTGCTGAAGTTGGAA
                      ____________________________________________________________
consensus GAGCAAAAGTTTTGATCGATGATAATCCAAGATATGCCATCGAGTGTGCTGAAGTTGGAA
 
. : . : . : . : . : . :
rJMSF014I02+ TGAAAGTTCTTCTGTTTGATTACGAAAATTCTTATCCATGGTGCAAGACAGAGTCAGTTG
rJMSF019E12+ TGAAAGTTCTTCTGTTTGATTACGAAAATTCTTATCCATGGTGCAAGACAGAGTCAGTTG
rJMSF019G03+ TGAAAGTTCTTCTGTTTGATTACGAAAATTCTTATCCATGGTGCAAGACAGAGTCAGTTG
rJMFF022E15+ TGAAAGTTCTTCTGTTTGATTACGAAAATTCTTATCCATGGTGCAAGACAGAGTCAGTTG
rJMFF041B04+ TGAAAGTTCTTCTGTTTGATTACGAAAATTCTTATCCATGGTGCAAGACAGAGTCAGTTG
                      ____________________________________________________________
consensus TGAAAGTTCTTCTGTTTGATTACGAAAATTCTTATCCATGGTGCAAGACAGAGTCAGTTG
 
. : . : . : . : . : . :
rJMSF014I02+ AAGGACACCCCCTAGTCACTAAAGTTCATAATTGGGAAGAAGTGGAGCAGCAATTAGTAT
rJMSF019E12+ AAGGACACCCCCTAGTCACTAAAGTTCATAATTGGGAAGAAGTGGAGCAGCAATTAGTAT
rJMSF019G03+ AAGGACACCCCCTAGTCACTAAAGTTCATAATTGGGAAGAAGTGGAGCAGCAATTAGTAT
rJMFF022E15+ AAGGACACCCCCTAGTCACTAAAGTTCATAATTGGGAAGAAGTGGAGCAGCAATTAGTAT
rJMFF041B04+ AAGGACACCCCCTAGTCACTAAAGTTCATAATTGGGAAGAAGTGGAGCAGCAATTAGTAT
                      ____________________________________________________________
consensus AAGGACACCCCCTAGTCACTAAAGTTCATAATTGGGAAGAAGTGGAGCAGCAATTAGTAT
 
. : . : . : . : . : . :
rJMSF014I02+ CGTGGACTTTTCCCAAAATCATTGCAAAGTAGGTTCGGTAGATAATTTGATGATTCAAAC
rJMSF019E12+ CGTGGACTTTTCCCAAAATCATTGCAAAGTAGGTTCGGTAGATAATTTGATGATTCAAAC
rJMSF019G03+ CGTGGACTTTTCCCAAAATCATTGCAAAGTAGGTTCGGTAGATAATTTGATGATTCAAAC
rJMFF022E15+ CGTGGACTTTTCCCAAAATCATTGCAAAGTAGGTTCGGTAGATAATTTGATGATTCAAAC
rJMFF041B04+ CGTGGACTTTTCCCAAAATCATTGCAAAGTAGGTTCGGTAGATAATTTGATGATTCAAAC
                      ____________________________________________________________
consensus CGTGGACTTTTCCCAAAATCATTGCAAAGTAGGTTCGGTAGATAATTTGATGATTCAAAC
 
. : . : . : . : . : . :
rJMSF014I02+ GAGTTCTTACTCTTGTATTATCCTCGGTCCTGGCTCTAGGTGGAATGCTGGTGGGAGACC
rJMSF019E12+ GAGTTCTTACTCTTGTATTATCCTCGGTCCTGGCTCTAGGTGGAATGCTGGTGGGAGACC
rJMSF019G03+ GAGTTCTTACTCTTGTATTATCCTCGGTCCTGGCTCTAGGTGGAATGCTGGTGGGAGACC
rJMFF022E15+ GAGTTCTTACTCTTGTATTATCCTCGGTCCTGGCTCTAGGTGGAATGCTGGTGGGAGACC
rJMFF041B04+ GAGTTCTTACTCTTGTATTATCCTCGGTCCTGGCTCTAGGTGGAATGCTGGTGGGAGACC
                      ____________________________________________________________
consensus GAGTTCTTACTCTTGTATTATCCTCGGTCCTGGCTCTAGGTGGAATGCTGGTGGGAGACC
 
. : . : . : . : . : . :
rJMSF014I02+ ATTGAATCAAATCTGTGATAATAGACTTGAGTTGATTCCCTTTCCCTTCCAGGGCCAACC
rJMSF019E12+ ATTGAATCAAATCTGTGATAATAGACTTGAGTTGATTCCCTTTCCCTTCCAGGGCCAACC
rJMSF019G03+ A-TCAATCAAATCTGTGATAATAGACTTGAGTTGATTCCCTTTCCCTTCCAGGGCCAACC
rJMFF022E15+ ATTGAATCAAATCTGTGATAATAGACTTGAGTTGATTCCCTTTCCCTTCCAGGGCCAACC
rJMFF041B04+ ATTGAATCAAATCTGTGATAATAGACTTGAGTTGATTCCCTTTCCCTTCCAGGGCCAACC
                      ____________________________________________________________
consensus ATTGAATCAAATCTGTGATAATAGACTTGAGTTGATTCCCTTTCCCTTCCAGGGCCAACC
 
. : . : . : . : . : . :
rJMSF014I02+ CTCCTCCTTTCACTTTCATTATTTTTAAGAAATGGGGCAAGGTTTAGGCTCCTGAAATCT
rJMSF019E12+ CTCCTCCTTTCACTTTCATTATTTTTAAGAAATGGGGCAAGGTTTAGGCTCCTGAAATCT
rJMSF019G03+ CTCCTCCTTTCACTTTCATTATTTTTAAGAAATGGGGCAAGGTTTAGGCTCCTGAAATCT
rJMFF022E15+ CTCCTCCTTTCACTTTCATTA-TTTTAAGAAATGGGGCAAGGTTTAGGCTCCTGAAATCT
rJMFF041B04+ CTCCTCCTTTCACTTTCATTA-TTTTAAGAAATGGGGCAAGGTTTAGGCTCCTGAAATCT
                      ____________________________________________________________
consensus CTCCTCCTTTCACTTTCATTATTTTTAAGAAATGGGGCAAGGTTTAGGCTCCTGAAATCT
 
. : . : . : . : . : . :
rJMSF014I02+ TTACTTCAAG
rJMSF019E12+ TTACTTCAAG
rJMSF019G03+ TTACTTCAAGTAGATTGTATGACAAAGGTGGACAATAGAATCAAGCTTGTATAAAAC
rJMFF022E15+ TTACTTCAAGTAGATTGTATGACAAAGGTGGACAATAGAATCAAGCTTGTATAAAACATG
rJMFF041B04+ TTACTTCAAGTAGATTGTATGACAAAGGTGGACAATAGAATCAAGCTTGTATAAAACATG
                      ____________________________________________________________
consensus TTACTTCAAGTAGATTGTATGACAAAGGTGGACAATAGAATCAAGCTTGTATAAAACATG
 
. : . : . : . : . : . :
rJMFF022E15+ GAATTTATTTGATAACTAAAATGATCATAATAAAAGC
rJMFF041B04+ GAATTTATTTGATAACTAAAATGATCATAATAAAAGCATTCGGGTTCCATCTTTCCCATT
                      ____________________________________________________________
consensus GAATTTATTTGATAACTAAAATGATCATAATAAAAGCATTCGGGTTCCATCTTTCCCATT