| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF009L16 | Sequence | 561 | 002436 (12) | gb|EPS57680.1| | 1e-81 | pyruvate kinase, partial [Genlisea aurea] | 720 | 005473 (11) | gb|KHG00768.1| | 1e-89 | Pyruvate kinase, cytosolic isozyme [Gossypium arboreum] gb|KHG30128.1| Pyruvate |
| JMFF013F03 | Sequence | 561 | 002436 (12) | gb|EPS57680.1| | 1e-81 | pyruvate kinase, partial [Genlisea aurea] | 548 | 005473 (11) | gb|KHG00768.1| | 1e-49 | Pyruvate kinase, cytosolic isozyme [Gossypium arboreum] gb|KHG30128.1| Pyruvate |
| JMFF037C16 | Sequence | 512 | 005473 (11) | gb|KHG00768.1| | 1e-34 | Pyruvate kinase, cytosolic isozyme [Gossypium arboreum] gb|KHG30128.1| Pyruvate | 515 | 005473 (11) | gb|KHG00768.1| | 1e-34 | Pyruvate kinase, cytosolic isozyme [Gossypium arboreum] gb|KHG30128.1| Pyruvate |
| JMFF047J18 | Sequence | 597 | 002436 (12) | emb|CDP15340.1| | 5e-90 | unnamed protein product [Coffea canephora] | 559 | 005473 (11) | gb|KHG00768.1| | 1e-66 | Pyruvate kinase, cytosolic isozyme [Gossypium arboreum] gb|KHG30128.1| Pyruvate |
| JMFF051G23 | Sequence | 631 | 002436 (12) | ref|XP_009788506.1| | 4e-99 | PREDICTED: pyruvate kinase, cytosolic isozyme-like isoform X1 [Nicotiana sylves | 621 | 005473 (11) | gb|KHG00768.1| | 9e-65 | Pyruvate kinase, cytosolic isozyme [Gossypium arboreum] gb|KHG30128.1| Pyruvate |
| JMFN020O24 | Sequence | 638 | 005473 (11) | emb|CDP15340.1| | 2e-127 | unnamed protein product [Coffea canephora] | |||||
| JMSF022L06 | Sequence | 640 | 002436 (12) | gb|EPS57680.1| | 2e-101 | pyruvate kinase, partial [Genlisea aurea] | 752 | 005473 (11) | gb|KHN18718.1| | 8e-104 | Pyruvate kinase, cytosolic isozyme [Glycine soja] |
| JMSF035F01 | Sequence | 646 | 002436 (12) | gb|EPS57680.1| | 3e-103 | pyruvate kinase, partial [Genlisea aurea] | 689 | 005473 (11) | gb|KHG00768.1| | 1e-88 | Pyruvate kinase, cytosolic isozyme [Gossypium arboreum] gb|KHG30128.1| Pyruvate |
| JMSF046O12 | Sequence | 746 | 002436 (12) | ref|XP_009788507.1| | 5e-126 | PREDICTED: pyruvate kinase, cytosolic isozyme-like isoform X2 [Nicotiana sylves | 564 | 005473 (11) | gb|KHG00768.1| | 6e-61 | Pyruvate kinase, cytosolic isozyme [Gossypium arboreum] gb|KHG30128.1| Pyruvate |
| JMSF047P12 | Sequence | 702 | 002436 (12) | ref|XP_009788506.1| | 3e-127 | PREDICTED: pyruvate kinase, cytosolic isozyme-like isoform X1 [Nicotiana sylves | 684 | 005473 (11) | gb|KHG00768.1| | 4e-89 | Pyruvate kinase, cytosolic isozyme [Gossypium arboreum] gb|KHG30128.1| Pyruvate |
This contig is upended
. : . : . : . : . : . :
JMFN020O24- TGCTGTCTTGGATGGCACGTATGCCATCCTTCTTGGTGCCGAGACTTTGCGTGGATT
____________________________________________________________
consensus TGCTGTCTTGGATGGCACGTATGCCATCCTTCTTGGTGCCGAGACTTTGCGTGGATT
. : . : . : . : . : . :
JMFN020O24- ATACCCTGTTGAGTGTATTTCCATTGTGGGTAAAATTTGTGCTGAGTCAGAGAAGGTCTT
rJMSF022L06+ GAGTCAGAGAAGGTCTT
____________________________________________________________
consensus ATACCCTGTTGAGTGTATTTCCATTGTGGGTAAAATTTGTGCTGAGTCAGAGAAGGTCTT
. : . : . : . : . : . :
JMFN020O24- TAATCAAGATATGTACTTCAAGAAGACTGTCAAATTTGTCGGGGAGCCTATGACACACTT
rJMSF047P12+ GCCTATGACACACTT
rJMSF035F01+ GCCTATGACACACTN
rJMSF022L06+ TAATCAAGATATGTACTTCAAGAAGACTGTCAAATTTGTCGGGGAGCCTATGACACACTT
rJMFF009L16+ TATGACACACTN
____________________________________________________________
consensus TAATCAAGATATGTACTTCAAGAAGACTGTCAAATTTGTCGGGGAGCCTATGACACACTT
. : . : . : . : . : . :
JMFN020O24- GGAATCAATTGCTTCCTCTGCGGTACGAGCTGCTATTAAGGTGAAGGCTTCTGTGATTAT
rJMSF047P12+ GGAATCAATTGCTTCCTCTGCGGTACGAGCTGCTATTAAGGTGAAGGCTTCTGTGATTAT
rJMSF035F01+ GGAATCAATTGCTTCNTTTGCGGTACGAGCTGCTATTAAGGTGAAGGCTTCTGTGATTAT
rJMSF022L06+ GGAATCAATTGCTTCCTCTGCGGTACGAGCTGCTATTAAGGTGAAGGCTTCTGTGATTAT
rJMFF009L16+ GGAATCAATTGCTTCCTCTGCGGTACGAGCTGCTATTAAGGTGAAGGCTTCTGTGATTAT
____________________________________________________________
consensus GGAATCAATTGCTTCCTCTGCGGTACGAGCTGCTATTAAGGTGAAGGCTTCTGTGATTAT
. : . : . : . : . : . :
JMFN020O24- TTGCTTCACTTCATCTGGAAGGGCAGCAAGATTAATAGCAAAATATCGCCCAACAATGCC
rJMSF047P12+ TTGCTTCACTTCATCTGGAAGGGCAGCAAGATTAATAGCAAAATATCGCCCAACAATGCC
rJMFF047J18+ AAGGGCAGCAAGATTAATAGCAAAATATCGCCCAACAATGCC
rJMSF035F01+ TTGCTTCACTTCATCTGGAAGGGCAGCAAGATTAATAGCAAAATATCGCCCAACAATGCC
rJMSF046O12+ TCGCCCAACAATGCC
rJMSF022L06+ TTGCTTCACTTCATCTGGAAGGGCAGCAAGATTAATAGCAAAATATCGCCCAACAATGCC
rJMFF009L16+ TTGCTTCACTTCATCTGGAAGGGCAGCAAGATTAATAGCAAAATATCGCCCAACAATGCC
rJMFF051G23+ AGCAAGATTAATAGCAAAATATCGCCCAACAATGCC
____________________________________________________________
consensus TTGCTTCACTTCATCTGGAAGGGCAGCAAGATTAATAGCAAAATATCGCCCAACAATGCC
. : . : . : . : . : . :
JMFN020O24- AGTAATATCAGTTGTCATTCCTCGCCTCAAGACAAATCAACTAAAGTGGAGTTTTAGCGG
rJMSF047P12+ AGTAATATCAGTTGTCATTCCTCGCCTCAAGACAAATCAACTAAAGTGGAGTTTTAGCGG
rJMFF047J18+ AGTAATATCAGTTGTCATTCCTCGCCTCAAGACAAATCAACTAAAGTGGAGTTTTAGCGG
rJMSF035F01+ AGTAATATCAGTTGTCATTCCTCGCCTCAAGACAAATCAACTAAAGTGGAGTTTTAGCGG
rJMSF046O12+ AGTAATATCAGTTGTCATTCCTCGCCTCAAGACAAATCAACTAAAGTGGAGTTTTAGCGG
rJMSF022L06+ AGTAATATCAGTTGTCATTCCTCGCCTCAAGACAAATCAACTAAAGTGGAGTTTTAGCGG
rJMFF013F03+ TCAAGACAAATCAANTAAAGTGGAGTTTTAGCGG
rJMFF009L16+ AGTAATATCAGTTGTCATTCCTCGCCTCAAGACAAATCAACTAAAGTGGGGTTTTAGCGG
rJMFF051G23+ AGTAATATCAGTTGTCATTCCTCGCCTCAAGACAAATCAACTAAAGTGGAGTTTTAGCGG
____________________________________________________________
consensus AGTAATATCAGTTGTCATTCCTCGCCTCAAGACAAATCAACTAAAGTGGAGTTTTAGCGG
. : . : . : . : . : . :
JMFN020O24- TGCATTTGAGGCAAGGCAATCCCTGATTGTTCGTGGTCTTTTCCCCATGCTTGCTGATCC
rJMSF047P12+ TGCATNTGAGGCAAGGCAATCCCTGATTGTTCGTGGTCTTTTCCCCATGCTTGCTGATCC
rJMFF047J18+ TGCATNTGAGGCAAGGCAATCCCTGATTGTTCGTGGTCTTTTCCCCATGCTTGCTGATCC
rJMSF035F01+ TGCATTTGAGGCAAGGCAATCCCTGATTGTTCGTGGTCTTTTCCCCATGCTTGCTGATCC
rJMSF046O12+ TGCATTTGAGGCAAGGCAATCCCTGATTGTTCGTGGTCTTTTCCCCATGCTTGCTGATCC
rJMSF022L06+ TGCATTTGAGGCAAGGCAATCCCTGATTGTTCGTGGTCTTTTCCCCATGCTTGCTGATCC
rJMFF013F03+ TGCATTTGAGGCAAGGCAATCCCTGATTGTTCGTGGTCTTTTCCCCATGCTTGCTGATCC
rJMFF009L16+ TGCATTTGAGGCAAGGCAATCCCTGATTGTTCGTGGTCTTTTCCCCATGCTTGCTGATCC
rJMFF051G23+ TGCATNTGAGGCAAGGCAATCCCTGATTGTTCGTGGTCTTTTCCCCATGCTTGCTGATCC
JMFF037C16- ATTGTTCGTGGTCTTTTCCCCATGCTTGCTGATCC
rJMFF037C16+ ATTGTTCGTGGTCTTTTCCCCATGCTTGCTGATCC
____________________________________________________________
consensus TGCATTTGAGGCAAGGCAATCCCTGATTGTTCGTGGTCTTTTCCCCATGCTTGCTGATCC
. : . : . : . : . : . :
JMFN020O24- TCGACATCCTGCCGAGTCTACAAACGCCACAAATGAGTCTGTGCTTAAAGTTGCCCTCGA
rJMSF047P12+ TCGACATCCTGCCGAGTCTACAAACGCCACAAATGAGTCTGTGCTTAAAGTTGCCCTCGA
rJMFF047J18+ TCGACATCCTGCCGAGTCTACAAACGCCACAAATGAGTCTGTGCTTAAAGTTGCCCTCGA
rJMSF035F01+ TCGACATCCTGCCGAGTCTACAAACGCCACAAATGAGTCTGTGCTTAAAGTTGCCCTCGA
rJMSF046O12+ TCGACATCCTGCCGAGTCTACAAACGCCACAAATGAGTCTGTGCTTAAAGTTGCCCTCGA
rJMSF022L06+ TCGACATCCTGCCGAGTCTACAAACGCCACAAATGAGTCTGTGCTTAAAGTTGCCCTCGA
rJMFF013F03+ TCGACATCCTGCCGAGTCTACAAACGCCACAAATGAGTCTGTGCTTAAAGTTGCCCTCGA
rJMFF009L16+ TCGACATCCTGCCGAGTCTACAAACGCCACAAATGAGTCTGTGCTTAAAGTTGCCCTCGA
rJMFF051G23+ TCGACATCCTGCCGAGTCTACAAACGCCACAAATGAGTCTGTGCTTAAAGTTGCCCTCGA
JMFF037C16- TCGACATCCTGCCGAGTCTACAAACGCCACAAATGAGTCTGTGCTTAAAGTTGCCCTCGA
rJMFF037C16+ TCGACATCCTGCCGAGTCTACAAACGCCACAAATGAGTCTGTGCTTAAAGTTGCCCTCGA
____________________________________________________________
consensus TCGACATCCTGCCGAGTCTACAAACGCCACAAATGAGTCTGTGCTTAAAGTTGCCCTCGA
. : . : . : . : . : . :
JMFN020O24- TCACGGCAAGGCTTCAGGGGTTATAAAGTCACATGACCGAGTTGTGGTATGCCAAAAAGT
rJMSF047P12+ TCACGGCAAGGCTTCAGGGGTTATAAAGTCACATGACCGAGTTGTGGTATGCCAAAAAGT
rJMFF047J18+ TCACGGCAAGGCTTCAGGGGTTATAAAGTCACATGACCGAGTTGTGGTATGCCAAAAAGT
rJMSF035F01+ TCACGGCAAGGCTTCAGGGGTTATAAAGTCACATGACCGAGTTGTGGTATGCCAAAAAGT
rJMSF046O12+ TCACGGCAAGGCTTCAGGGGTTATAAAGTCACATGACCGAGTTGTGGTATGCCAAAAAGT
rJMSF022L06+ TCACGGCAAGGCTTCAGGGGTTATAAAGTCACATGACCGAGTTGTGGTATGCCAAAAAGT
rJMFF013F03+ TCACGGCAAGGCTTCAGGGGTTATAAAGTCACATGACCGAGTTGTGGTATGCCAAAAAGT
rJMFF009L16+ TCACGGCAAGGCTTCAGGGGTTATAAAGTCACATGACCGAGTTGTGGTATGCCAAAAAGT
rJMFF051G23+ TCACGGCAAGGCTTCAGGGGTTATAAAGTCACATGACCGAGTTGTGGTATGCCAAAAAGT
JMFF037C16- TCACGGCAAGGCTTCAGGGGTTATAAAGTCACATGACCGAGTTGTGGTATGCCAAAAAGT
rJMFF037C16+ TCACGGCAAGGCTTCAGGGGTTATAAAGTCACATGACCGAGTTGTGGTATGCCAAAAAGT
____________________________________________________________
consensus TCACGGCAAGGCTTCAGGGGTTATAAAGTCACATGACCGAGTTGTGGTATGCCAAAAAGT
. : . : . : . : . : . :
JMFN020O24- TGGAGACGCTTCTGTGGTTAAGATTATTGAACTCGAAGACTAAGGCTGCCACACTGGGCG
rJMSF047P12+ TGGAGACGCTTCTGTGGTTAAGATTATTGAACTCGAAGACTAAGGCTGCCACACTGGGCG
rJMFF047J18+ TGGAGACGCTTCTGTGGTTAAGATTATTGAACTCGAAGACTAAGGCTGCCACACTGGGCG
rJMSF035F01+ TGGAGACGCTTCTGTGGTTAAGATTATTGAACTCGAAGACTAAGGCTGCCACACTGGGCG
rJMSF046O12+ TGGAGACGCTTCTGTGGTTAAGATTATTGAACTCGAAGACTAAGGCTGCCACACTGGGCG
rJMSF022L06+ TGGAGACGCTTCTGTGGTTAAGATTATTGAACTCGAAGACTAAGGCTGCCACACTGGGCG
rJMFF013F03+ TGGAGACGCTTCTGTGGTTAAGATTATTGAACTCGAAGACTAAGGCTGCCACACTGGGCG
rJMFF009L16+ TGGAGACGCTTCTGTGGTTAAGATTATTGAACTCGAAGACTAAGGCTGCCACACTGGGCG
rJMFF051G23+ TGGAGACGCTTCTGTGGTTAAGATTATTGAACTCGAAGACTAAGGCTGCCACACTGGGCG
JMFF037C16- TGGAGACGCTTCTGTGGTTAAGATTATTGAACTCGAAGACTAAGGCTGCCACACTGGGCG
rJMFF037C16+ TGGAGACGCTTCTGTGGTTAAGATTATTGAACTCGAAGACTAAGGCTGCCACACTGGGCG
____________________________________________________________
consensus TGGAGACGCTTCTGTGGTTAAGATTATTGAACTCGAAGACTAAGGCTGCCACACTGGGCG
. : . : . : . : . : . :
JMFN020O24- TTACATCCCACAGATTTTTGAGTGCAAAGGTGGACTACCAA
rJMSF047P12+ TTACATCCCACAGATTTTTGAGTGCAAAGGTGGACTACCAAAGCCTTCACTGTGAGGATT
rJMFF047J18+ TTACATCCCACAGATTTTTGAGTGCAAAGGTGGACTACCAAAGCCTTCACTGTGAGGATT
rJMSF035F01+ TTACATCCCACAGATTTTTGAGTGCAAAGGTGGACTACCAAAGCCTTCACTGTGAGGATT
rJMSF046O12+ TTACATCCCACAGATTTTTGAGTGCAAAGGTGGACTACCAAAGCCTTCACTGTGAGGATT
rJMSF022L06+ TTACATCCCACAGATTTTTGAGTGCAAAGGTGGACTACCAAAGCCTTCACTGTGAGGATT
rJMFF013F03+ TTACATCCCACAGATTTTTGAGTGCAAAGGTGGACTACCAAAGCCTTCACTGTGAGGATT
rJMFF009L16+ TTACATCCCACAGATTTTTGAGTGCAAAGGTGGACTACCAAAGCCTTCACTGTGAGGATT
rJMFF051G23+ TTACATCCCACAGATTTTTGAGTGCAAAGGTGGACTACCAAAGCCTTCACTGTGAGGATT
JMFF037C16- TTACATCCCACAGATTTTTGAGTGCAAAGGTGGACTACCAAAGCCTTCACTGTGAGGATT
rJMFF037C16+ TTACATCCCACAGATTTTTGAGTGCAAAGGTGGACTACCAAAGCCTTCACTGTGAGGATT
____________________________________________________________
consensus TTACATCCCACAGATTTTTGAGTGCAAAGGTGGACTACCAAAGCCTTCACTGTGAGGATT
. : . : . : . : . : . :
rJMSF047P12+ TAATTTAGGTTTTGGTTTATACTACATACTGTGGACTAGATAAAATTGTTGATTAAAACC
rJMFF047J18+ TAATTTAGGTTTTGGTTTATACTACATACTGTGGACTAGATAAAATTGTTGATTAAAACC
rJMSF035F01+ TAATTTAGGTTTTGGTTTATACTACATACTGTGGACTAGATAAAATTGTTGATTAAAACC
rJMSF046O12+ TAATTTAGGTTTTGGTTTATACTACATACTGTGGACTAGATAAAATTGTTGATTAAAACC
rJMSF022L06+ TAATTTAGGTTTTGGTTTATACTACATACTGTGGACTAGATAAAATTGTTGATTAAAACC
rJMFF013F03+ TAATTTAGGTTTTGGTTTATACTACATACTGTGGACTAGATAAAATTGTTGATTAAAACC
rJMFF009L16+ TAATTTAGGTTTTGGTTTATACTACATACTGTGGACTAGATAAAATTGTTGATTAAAACC
rJMFF051G23+ TAATTTAGGTTTTGGTTTATACTACATACTGTGGACTAGATAAAATTGTTGATTAAAACC
JMFF037C16- TAATTTAGGTTTTGGTTTATACTACATACTGTGGACTAGATAAAATTGTTGATTAAAACC
rJMFF037C16+ TAATTTAGGTTTTGGTTTATACTACATACTGTGGACTAGATAAAATTGTTGATTAAAACC
____________________________________________________________
consensus TAATTTAGGTTTTGGTTTATACTACATACTGTGGACTAGATAAAATTGTTGATTAAAACC
. : . : . : . : . : . :
rJMSF047P12+ CGATTTTATGGCATCCGTTAGACCATGTTTCATNGGGCAGGGTTTTGTATTAATATTGTT
rJMFF047J18+ CGATTTTATGGCATCCGTTAGACCATGTTTCATTGGGCAGGGTTTTGTATTAATATTGTT
rJMSF035F01+ CGATTTTATGGCATCCGTTAGACCATGTTTCATTGGGCAGGGTTTTGTATTAATATTGTT
rJMSF046O12+ CGATTTTATGGCATCCGTTAGACCATGTTTCATTGGGCAGGGTTTTGTATTAATATTGTT
rJMSF022L06+ CGATTTTATGGCATCCGTTAGACCATGTTTCATTGGGCAGGGTTTTGTATTAATATTGTT
rJMFF013F03+ CGATTTTATGGCATCCGTTAGACCATGTTTCATTGGGCAGGGTTTTGTATTAATATTGTT
rJMFF009L16+ CGATTTTATGGCATCCGTTAGACCATGTTTCATTGGGCAGGGTTTTGTATTAATATTGTT
rJMFF051G23+ CGATTTTATGGCATCCGTTAGACCATGTTTCATTGGGCAGGGTTTTGTATTAATATTGTT
JMFF037C16- CGATTTTATGGCATCCGTTAGACCATGTTTCATTGGGCAGGGTTTTGTATTAATATTGTT
rJMFF037C16+ CGATTTTATGGCATCCGTTAGACCATGTTTCATTGGGCAGGGTTTTGTATTAATATTGTT
____________________________________________________________
consensus CGATTTTATGGCATCCGTTAGACCATGTTTCATTGGGCAGGGTTTTGTATTAATATTGTT
. : . : . : . : . : . :
rJMSF047P12+ CTTTTTAAATTTTGAATATGGAATGCGAAATGTGCATCTTATGGAGAATATGGATACAAT
rJMFF047J18+ CTTTTTAAATTTTGAATATGGAATGCGAAATGTGCAT
rJMSF035F01+ CTTTTTAAATTTTGAATATGGAATGCGAAATGTGCATCTTATGGAGAATATGGATACAAT
rJMSF046O12+ CTTTTTAAATTTTGAATATGGAATGCGAAATGTGCATCTTATGGAGAATATGGATACAAT
rJMSF022L06+ CTTTTTAAATTTTGAATATGGAATGCGAAATGTGCATCTTATGGAGAATATGGATACAAT
rJMFF013F03+ CTTTTTAAATTTTGAATATGGAATGCGAAATGTGCATCTTATGGAGAATATGGATACAAT
rJMFF009L16+ CTTTTTAAATTTTGAATATGGAATGCGAAATGTGCATCTTATGGAGAATATGGATACAAT
rJMFF051G23+ CTTTTTAAATTTTGAATATGGAATGCGAAATGTGCATCTTATGGAGAATATGGATACAAT
JMFF037C16- CTTTTTAAATTTTGAATATGGAATGCGGAATGTGCATCTTATGGAGAATATGGATACAAT
rJMFF037C16+ CTTTTTAAATTTTGAATATGGAATGCGGAATGTGCATCTTATGGAGAATATGGATACAAT
____________________________________________________________
consensus CTTTTTAAATTTTGAATATGGAATGCGAAATGTGCATCTTATGGAGAATATGGATACAAT
. : . : . : . : . : . :
rJMSF047P12+ CTTTTTGTG
rJMSF035F01+ CTTTTTGT
rJMSF046O12+ CTTTTTGTG
rJMSF022L06+ CTTTTTGTGAAAAA
rJMFF013F03+ CTTTTTGTGTAAAAACAGAA
rJMFF009L16+ CTTTTTGTGTAAAAACAGAATGAATGCTCAATAAAGT
rJMFF051G23+ CTTTTTGTGTAAAAACAGAATGAATGCTCAATAAAGTTGTAGTGG
JMFF037C16- CTTTTTGTGTAAAAACAGAATGAATGCTCAATAAAGTTGTAGTGGGAACTT
rJMFF037C16+ CTTTTTGTGTAAAAACAGAATGAATGCTCAATAAAGTTGTAGTGGGAACTTGGGAAGAAG
____________________________________________________________
consensus CTTTTTGTGTAAAAACAGAATGAATGCTCAATAAAGTTGTAGTGGGAACTTGGGAAGAAG