Contig 005470:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005P09Sequence753005470 (4)ref|XP_011009777.1|3e-59PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondr
JMFF035L24Sequence590009276 (3)ref|XP_009781367.1|7e-56PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondr693005470 (4)ref|XP_009616314.1|1e-66PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondr
JMSF017N01Sequence237009276 (3)779005470 (4)ref|XP_003556404.1|4e-90PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondr
JMSF037O13Sequence465009276 (3)ref|XP_009616314.1|1e-26PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondr653005470 (4)ref|XP_009616314.1|7e-65PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondr

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF017N01+ CGCAAGTACGTGCCAACATGAGAACTGGTAGAGTAACTGATGCTG
                      ____________________________________________________________
consensus CGCAAGTACGTGCCAACATGAGAACTGGTAGAGTAACTGATGCTG
 
. : . : . : . : . : . :
rJMSF017N01+ GTGTGACATCATCTTTACTAGAAACTGTTGAGAGCAGTGATCTGATTGCATATGGCCTTA
rJMFF005P09+ GTTGAGAGCAGTGATCTGATTGCATATGNCCTTA
                      ____________________________________________________________
consensus GTGTGACATCATCTTTACTAGAAACTGTTGAGAGCAGTGATCTGATTGCATATGGCCTTA
 
. : . : . : . : . : . :
rJMSF017N01+ TTCCAGAGTTTATCGGGCGCTTCCCTATTTTAGTTAGTTTGTCAGCACTTACTGAGAACC
rJMFF005P09+ TTCCAGAGTTTATCGGGCGCTTCCCTATTTTAGTTAGTTTGTCAGCACTTACTGAGAACC
rJMSF037O13+ AGTTTGTCAGCACTTACTGAGAACC
rJMFF035L24+ ATTTTAGTTAGTTTGTCAGCACTTACTGAGAACC
                      ____________________________________________________________
consensus TTCCAGAGTTTATCGGGCGCTTCCCTATTTTAGTTAGTTTGTCAGCACTTACTGAGAACC
 
. : . : . : . : . : . :
rJMSF017N01+ AACTTGTT-CAGGTCCTCGTAGACCCAAAAAATGCTCTTTGCAAGCAGTACAAGAAATTG
rJMFF005P09+ AACTTGTTCCAGGTCCTCGTAGACCCAAAAAATGCTCTTTGCAAGCAGTACAAGAAATTG
rJMSF037O13+ AACTTGTT-CAGGTCCTCGTAGACCCAAAAAATGCTCTTTGCAAGCAGTACAAGAAATTG
rJMFF035L24+ AACTTGTT-CAGGTCCTCGTAGACCCAAAAAATGCTCTTTGCAAGCAGTACAAGAAATTG
                      ____________________________________________________________
consensus AACTTGTT-CAGGTCCTCGTAGACCCAAAAAATGCTCTTTGCAAGCAGTACAAGAAATTG
 
. : . : . : . : . : . :
rJMSF017N01+ TTTAACATGAACAAAGTGAAGCTACAATTTACAGACGAGGCGTTGAGGTTAATTGCGAAG
rJMFF005P09+ TTTAACATGAACAAAGTGAAGCTACAATTTACAGACGAGGCGTTGAGGTTAATTGCGAAG
rJMSF037O13+ TTTAACATGAACAAAGTGAAGCTACAATTTACAGACGAGGCGTTGAGGTTAATTGCGAAG
rJMFF035L24+ TTTAACATGAACAAAGTGAAGCTACAATTTACAGACGAGGCGTTGAGGTTAATTGCGAAG
                      ____________________________________________________________
consensus TTTAACATGAACAAAGTGAAGCTACAATTTACAGACGAGGCGTTGAGGTTAATTGCGAAG
 
. : . : . : . : . : . :
rJMSF017N01+ AAAGCGTATGCTAAAAACACCGGCGCAAGAGGGTTAAGAGCCATACTGGAGAGCATATTA
rJMFF005P09+ AAAGCGTATGCTAAAAACACCGGCGCAAGAGGGTTAAGAGCCATACTGGAGAGCATATTA
rJMSF037O13+ AAAGCGTATGCTAAAAACACCGGCGCAAGAGGGTTAAGAGCCATACTGGAGAGCATATTA
rJMFF035L24+ AAAGCGTATGCTAAAAACACCGGCGCAAGAGGGTTAAGAGCCATACTGGAGAGCATATTA
                      ____________________________________________________________
consensus AAAGCGTATGCTAAAAACACCGGCGCAAGAGGGTTAAGAGCCATACTGGAGAGCATATTA
 
. : . : . : . : . : . :
rJMSF017N01+ ACTGATGCTATGTATGAGATTCCTGAAGTTAAGGCAGGGAACGAGAAAGTAGATGCTGTT
rJMFF005P09+ ACTGATGCTATGTATGAGATTCCTGAAGTTAAGGCAGGGAACGAGAAAGTAGATGCTGTT
rJMSF037O13+ ACTGATGCTATGTATGAGATTCCTGAAGTTAAGGCAGGGAACGAGAAAGTAGATGCTGTT
rJMFF035L24+ ACTGATGCTATGTATGAGATTCCTGAAGTTAAGGCAGGGAACGAGAAAGTAGATGCTGTT
                      ____________________________________________________________
consensus ACTGATGCTATGTATGAGATTCCTGAAGTTAAGGCAGGGAACGAGAAAGTAGATGCTGTT
 
. : . : . : . : . : . :
rJMSF017N01+ GTGGTTGATGAAGAGTCGGTGGGTAGCGCAAGCGTCCCTGGATGTGGTGGTAAATTACTC
rJMFF005P09+ GTGGTTGATGAAGAGTCGGTGGGTAGCGCAAGCGTCCCTGGATGTGGTGGTAAATTACTC
rJMSF037O13+ GTGGTTGATGAAGAGTCGGTGGGTAGCGCAAGCGTCCCTGGATGTGGTGGTAAATTACTC
rJMFF035L24+ GTGGTTGATGAAGAGTCGGTGGGTAGCGCAAGCGTCCCTGGATGTGGTGGTAAATTACTC
                      ____________________________________________________________
consensus GTGGTTGATGAAGAGTCGGTGGGTAGCGCAAGCGTCCCTGGATGTGGTGGTAAATTACTC
 
. : . : . : . : . : . :
rJMSF017N01+ TTTGGAAATGGTGCTTTGGAGCAATACCTTGCTCGTAATCAGTCTAAAGATCAAAAGGAA
rJMFF005P09+ TTTGGAAATGGTGCTTTGGAGCAATACCTTGCTCGGAATCAGTCTAAAGATCAAAAGGAA
rJMSF037O13+ TTTGGAAATGGTGCTTTGGAGCAATACCTTGCTCGGAATCAGTCTAAAGATCAAAAGGAA
rJMFF035L24+ TTTGGAAATGGTGCTTTGGAGCAATACCTTGCTCGGAATCAGTCTAAAGATCAAAAGGAA
                      ____________________________________________________________
consensus TTTGGAAATGGTGCTTTGGAGCAATACCTTGCTCGGAATCAGTCTAAAGATCAAAAGGAA
 
. : . : . : . : . : . :
rJMSF017N01+ ATTGCTGAATCGGAACTGCAAGATGGTGGTGTTTCAGAAGTTTCATCAAGAGCAATGAGC
rJMFF005P09+ ATTGCTGAATCGGAACTGCAAGATGGTGGTGTTTCAGAAGTTTCATCAAGAGCAATGAGC
rJMSF037O13+ ATTGCTGAATCGGAACTGCAAGATGGTGGTGTTTCAGAAGTTTCATCAAGAGCAATGAGC
rJMFF035L24+ ATTGCTGAATCGGAACTGCAAGATGGTGGTGTTTCAGAAGTTTCATCAAGAGCAATGAGC
                      ____________________________________________________________
consensus ATTGCTGAATCGGAACTGCAAGATGGTGGTGTTTCAGAAGTTTCATCAAGAGCAATGAGC
 
. : . : . : . : . : . :
rJMSF017N01+ ATATAACATTAACAGAATCAGATTTTGTAATTTGTAGTATTTCTGTCTATATAAATTGTT
rJMFF005P09+ ATATAACATTAACAGAATCAGATTTTGTAATTTGTAGTATTTCTGTCTATATAAATTGTT
rJMSF037O13+ ATATAACATTAACAGAATCAGATTTTGTAATTTGTAGTATTTCTGTCTATATAAATTGTT
rJMFF035L24+ ATATAACATTAACAGAATCAGATTTTGTAATTTGTAGTATTTCTGTCTATATAAATTGTT
                      ____________________________________________________________
consensus ATATAACATTAACAGAATCAGATTTTGTAATTTGTAGTATTTCTGTCTATATAAATTGTT
 
. : . : . : . : . : . :
rJMSF017N01+ GTAAATTTTGCATCCATACTAGTTGTATTGATCCAATTGTAACACAATATAGGGCATCTA
rJMFF005P09+ GTAAATTTTGCATCCATACTAGTTGTATTGATCCAATTGTAACACAATATAGGGCATCTA
rJMSF037O13+ GTAAATTTTGCATCCATACTAGTTGTATTGATCCAATTGTAACACAATATAGGGCATCTA
rJMFF035L24+ GTAAATTTTGCATCCATACTAGTTGTATTGATCCAATTGTAACACAATATAGGGCATCTA
                      ____________________________________________________________
consensus GTAAATTTTGCATCCATACTAGTTGTATTGATCCAATTGTAACACAATATAGGGCATCTA
 
. : . : . : . : . : . :
rJMSF017N01+ GCCATTTACCAGAAAGGTCACAGAAGATAGGGAATGAAGGGGATCAATAGAAGGAAGGAT
rJMFF005P09+ GCCATTTACCAGAAAGGTCACAGAAGATAGGGAATGAAGGGGATCAATAGAAGGAAGGAT
rJMSF037O13+ GCCATTTACCAGAAAGGTCACAGAAGATAGGGAATGAAGGGGATCAATAGAAGGAAGGAT
rJMFF035L24+ GCCATTTACCAGAAAGGTCACAGAAGATAGGGAATGAAGGGGATCAATAGAAGGAAGGAT
                      ____________________________________________________________
consensus GCCATTTACCAGAAAGGTCACAGAAGATAGGGAATGAAGGGGATCAATAGAAGGAAGGAT
 
. : . : . : . : . : . :
rJMSF017N01+ TATGTACCATTTCTA
rJMFF005P09+ TATGTACCATTTCTAGTTTTCATTCAGCATCTGTAGACATTCTT
rJMSF037O13+ TATGTACCATTTCTAGTTT
rJMFF035L24+ TATGTACCATTTCTAGTTTTCATTCAGCATCTGTAGACATTCTTTGGCAAGGGTATTTAT
                      ____________________________________________________________
consensus TATGTACCATTTCTAGTTTTCATTCAGCATCTGTAGACATTCTTTGGCAAGGGTATTTAT