| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001L11 | Sequence | 522 | 005453 (11) | ref|XP_011080600.1| | 4e-78 | PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L5-like [Sesamum indic | 743 | 005453 (11) | emb|CDP04012.1| | 2e-70 | unnamed protein product [Coffea canephora] |
| JMFF030F10 | Sequence | 527 | 005453 (11) | ref|XP_011080600.1| | 2e-79 | PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L5-like [Sesamum indic | 708 | 005453 (11) | emb|CDP04012.1| | 5e-69 | unnamed protein product [Coffea canephora] |
| JMFN031H01 | Sequence | 625 | 005453 (11) | emb|CDP04012.1| | 9e-85 | unnamed protein product [Coffea canephora] | |||||
| JMSF003E14 | Sequence | 411 | 005453 (11) | ref|XP_010274755.1| | 9e-55 | PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L5-like [Nelumbo nucif | 740 | 005453 (11) | emb|CDP04012.1| | 2e-124 | unnamed protein product [Coffea canephora] |
| JMSF010C16 | Sequence | 244 | 005453 (11) | 763 | 005453 (11) | emb|CDP04012.1| | 9e-130 | unnamed protein product [Coffea canephora] | |||
| JMSF025D15 | Sequence | 699 | 005453 (11) | ref|XP_006344362.1| | 3e-126 | PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L5-like isoform X1 [So | 756 | 005453 (11) | emb|CDP04012.1| | 8e-151 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMSF010C16- GGTTAGAAGCTGCAACCCTAGGCCCTTG
____________________________________________________________
consensus GGTTAGAAGCTGCAACCCTAGGCCCTTG
. : . : . : . : . : . :
JMSF010C16- CCCAAAAATCAATACAGTCAAAACTCCATTAAAACTCTACTGTTCGGAGGTTGAAATACC
JMFF001L11- GGTTGAAATACC
JMFF030F10- GGTTGAAATACC
____________________________________________________________
consensus CCCAAAAATCAATACAGTCAAAACTCCATTAAAACTCTACTGTTCGGAGGTTGAAATACC
. : . : . : . : . : . :
JMSF010C16- GACAATAACCACTACTCCACCGTGAAATCCAGATATATCTCTCAAGTCTCCGTACCGGCC
JMSF003E14- GACAATAACCACTACTCCACCGTGAAATCCAGATATATCTCTCAAGTCTCCGTACCGGCC
JMFF001L11- GACAATAACCACTACTCCACCGTGAAATCCAGATATATCTCTCAAGTCTCCGTACCGGCC
JMFF030F10- GACAATAACCACTACTCCACCGTGAAATCCAGATATATCTCTCAAGTCTCCGTACCGGCC
JMSF025D15- GACAATAACCACTACTCCACCGTGAAATCCAGATATATCTCTCAAGTCTCCGTACCGGCC
____________________________________________________________
consensus GACAATAACCACTACTCCACCGTGAAATCCAGATATATCTCTCAAGTCTCCGTACCGGCC
. : . : . : . : . : . :
JMSF010C16- GCCGCGTCCCACCTTCTGACGGCCGTCCTCCTTCTCCGCTGCTTATCTTCTGCTTACGTA
JMSF003E14- GCCGCGTCCCACCTTCTGACGGCCGTCCTCCTTCTCCGCTGCTTATCTTCTGCTTACGTA
JMFF001L11- GCCGCGTCCCACCTTCTGACGGCCGTCCTCCTTCTCCGCTGCTTATCTTCTGCTTACGTA
JMFF030F10- GCCGCGTCCCACCTTCTGACGGCCGTCCTCCTTCTCCGCTGCTTATCTTCTGCTTACGTA
JMSF025D15- GCCGCGTCCCACCTTCTGACGGCCGTCCTCCTTCTCCGCTGCTTATCTTCTGCTTACGTA
____________________________________________________________
consensus GCCGCGTCCCACCTTCTGACGGCCGTCCTCCTTCTCCGCTGCTTATCTTCTGCTTACGTA
. : . : . : . : . : . :
JMSF010C16- AAGATCATTCATCATGTCTTGGTGCACTATCGAATC
JMSF003E14- AAGATCATTCATCATGTCTTGGTGCACTATCGAATCAGATCCCGGGGTTTTCACTGAGCT
JMFF001L11- AAGATCATTCATCATGTCTTGGTGCACTATCGAATCAGATCCCGGGGTTTTCACTGAGCT
JMFF030F10- AAGATCATTCATCATGTCTTGGTGCACTATCGAATCAGATCCCGGGGTTTTCACTGAGCT
JMSF025D15- AAGATCATTCATCATGTCTTGGTGCACTATCGAATCAGATCCCGGGGTTTTCACTGAGCT
____________________________________________________________
consensus AAGATCATTCATCATGTCTTGGTGCACTATCGAATCAGATCCCGGGGTTTTCACTGAGCT
. : . : . : . : . : . :
JMSF003E14- TATTCAGCAAATGCAAGTAAAGGGAGTGCAGGTTGAGGAATTGTATTCACTGGATATCGA
JMFF001L11- TATTCAGCAAATGCAAGTAAAGGGAGTGCAGGTTGAGGAATTGTATTCACTGGATATCGA
JMFF030F10- TATTCAGCAAATGCAAGTAAAGGGAGTGCAGGTTGAGGAATTGTATTCACTGGATATCGA
JMSF025D15- TATTCAGCAAATGCAAGTAAAGGGAGTGCAGGTTGAGGAATTGTATTCACTGGATATCGA
____________________________________________________________
consensus TATTCAGCAAATGCAAGTAAAGGGAGTGCAGGTTGAGGAATTGTATTCACTGGATATCGA
. : . : . : . : . : . :
JMSF003E14- CGCCCTCAACAACCTTAGGCCAATCTATGGATTAATATTTCTTTTCAAGTGGCGACCGGA
JMFF001L11- CGCCCTCAACAACCTTAGGCCAATCTATGGATTAATATTTCTTTTCAAGTGGCGACCGGA
JMFF030F10- CGCCCTCAACAACCTTAGGCCAATCTATGGATTAATATTTCTTTTCAAGTGGCGACCGGA
JMSF025D15- CGCCCTCAACAACCTTAGGCCAATCTATGGATTAATATTTCTTTTCAAGTGGCGACCGGA
____________________________________________________________
consensus CGCCCTCAACAACCTTAGGCCAATCTATGGATTAATATTTCTTTTCAAGTGGCGACCGGA
. : . : . : . : . : . :
JMSF003E14- TGAAAAAGATGACCGTCTTGTGATTAAGGATCCCAGTCCTAACTTGTTCTTTGCTAGCCA
JMFF001L11- TGAAAAAGATGACCGTCTTGTGATTAAGGATCCCAGTCCTAACTTGTTCTTTGCTAGCCA
JMFF030F10- TGAAAAAGATGACCGTCTTGTGATTAAGGATCCCAGTCCTAACTTGTTCTTTGCTAGCCA
JMSF025D15- TGAAAAAGATGACCGTCTTGTGATTAAGGATCCCAGTCCTAACTTGTTCTTTGCTAGCCA
____________________________________________________________
consensus TGAAAAAGATGACCGTCTTGTGATTAAGGATCCCAGTCCTAACTTGTTCTTTGCTAGCCA
. : . : . : . : . : . :
JMSF003E14- GGTTATCAATAATGCGTGTGCTACCCAAGCAATCCTGTCCATTCTTCTGA
JMFF001L11- GGTTATCAATAATGCGTGTGCTACCCAAGCAATCCTGTCCATTCTTCTGAACAGCCCAGA
JMFF030F10- GGTTATCAATAATGCGTGTGCTACCCAAGCAATCCTGTCCATTCTTCTGAACAGCCCAGA
JMSF025D15- GGTTATCAATAATGCGTGTGCTACCCAAGCAATCCTGTCCATTCTTCTGAACAGCCCAGA
rJMSF025D15+ TGAACAGCCCAGA
____________________________________________________________
consensus GGTTATCAATAATGCGTGTGCTACCCAAGCAATCCTGTCCATTCTTCTGAACAGCCCAGA
. : . : . : . : . : . :
JMFF001L11- TATTGACATTGGCCCAGAACTATCACAGTTGAAAGAATTCACAAAGAACTTTCCACCCGA
JMFF030F10- TATTGACATTGGCCCAGAACTATCACAGTTGAAAGAATTCACAAAGAACTTTCCACCCGA
JMSF025D15- TATTGACATTGGCCCAGAACTATCACAGTTGAAAGAATTCACAAAGAACTTTCCACCCGA
rJMSF025D15+ TATTGACATTGGCCCAGAACTATCACAGTTGAAAGAATTCACAAAGAACTTTCCACCCGA
____________________________________________________________
consensus TATTGACATTGGCCCAGAACTATCACAGTTGAAAGAATTCACAAAGAACTTTCCACCCGA
. : . : . : . : . : . :
JMFF001L11- GCTTAAAGGTTTAGCTATCAATAACAGTGA
JMFF030F10- GCTTAAAGGTTTAGCTATCAATAACAGTGA
JMSF025D15- GCTTAAAGGTTTAGCTATCAATAACAGTGAGGCAATTCGAGGTGCCCATAATAGCTTTGC
rJMSF025D15+ GCTTAAAGGTTTAGCTATCAATAACAGTGAGGCAATTCGAGGTGCCCATAATAGCTTTGC
rJMSF010C16+ CTATCAATAACAGTGAGGCAATTCGAGGTGCCCATAATAGCTTTGC
rJMSF003E14+ GAGGTGCCCATAATAGCTTTGC
____________________________________________________________
consensus GCTTAAAGGTTTAGCTATCAATAACAGTGAGGCAATTCGAGGTGCCCATAATAGCTTTGC
. : . : . : . : . : . :
JMSF025D15- AAGACCAGAGCCCTTTGTTCCCGAGGAGCAGAAATCTGCTGGGAAAGATGATGATGTTTA
rJMSF025D15+ AAGACCAGAGCCCTTTGTTCCCGAGGAGCAGAAATCTGCTGGGAAAGATGATGATGTTTA
rJMSF010C16+ AAGACCAGAGCCCTTTGTTCCCGAGGAGCAGAAATCTGCTGGGAAAGATGATGATGTTTA
rJMSF003E14+ AAGACCAGAGCCCTTTGTTCCCGAGGAGCAGAAATCTGCTGGGAAAGATGATGATGTTTA
____________________________________________________________
consensus AAGACCAGAGCCCTTTGTTCCCGAGGAGCAGAAATCTGCTGGGAAAGATGATGATGTTTA
. : . : . : . : . : . :
JMSF025D15- CCATTTCATAAGCTACATACCAGTCGATGGTATACTCTATGAGCTTGATGGATTGAAAGA
rJMSF025D15+ CCATTTCATAAGCTACATACCAGTCGATGGTATACTCTATGAGCTTGATGGATTGAAAGA
rJMSF010C16+ CCATTTCATAAGCTACATACCAGTCGATGGTATACTCTATGAGCTTGATGGATTGAAAGA
rJMSF003E14+ CCATTTCATAAGCTACATACCAGTCGATGGTATACTCTATGAGCTTGATGGATTGAAAGA
____________________________________________________________
consensus CCATTTCATAAGCTACATACCAGTCGATGGTATACTCTATGAGCTTGATGGATTGAAAGA
. : . : . : . : . : . :
JMSF025D15- AGGTCCCATCAGCCTCGGTCCATGCCCTGGTGGGCACA
rJMSF025D15+ AGGTCCCATCAGCCTCGGTCCATGCCCTGGTGGGCACAATGACCTAGATTGGTTGCGTTT
rJMSF010C16+ AGGTCCCATCAGCCTCGGTCCATGCCCTGGTGGGCACAATGACCTAGATTGGTTGCGTTT
rJMSF003E14+ AGGTCCCATCAGCCTCGGTCCATGCCCTGGTGGGCACAATGACCTAGATTGGTTGCGTTT
JMFN031H01+ AGCCTCGGTCCATGCCCTGGTGGGCACAATGACCTAGATTGGTTGCGTTT
rJMFF001L11+ GGTGGCCACAATGACCTAGATTGGTTGCGTTT
____________________________________________________________
consensus AGGTCCCATCAGCCTCGGTCCATGCCCTGGTGGGCACAATGACCTAGATTGGTTGCGTTT
. : . : . : . : . : . :
rJMSF025D15+ GGTGCAG-CCAGTGATTCAGGAACGCATTGAAAAGTACTCGAGAAATGAAATTAGGTTCA
rJMSF010C16+ GGTGCAG-CCAGTGATTCAGGAACGCATTGAAAAGTACTCGAGAAATGAAATTAGGTTCA
rJMSF003E14+ GGTGCAG-CCAGTGATTCAGGAACGCATTGAAAAGTACTCGAGAAATGAAATTAGGTTCA
JMFN031H01+ GGTGCAG-CCAGTGATTCAGGAACGCATTGAAAAGTACTCGAGAAATGAAATTAGGTTCA
rJMFF001L11+ GGTGCAGCCCAGTGATTCAGGAACGCATTGAAAAGTACTCGAGAAATGAAATTAGGTTCA
rJMFF030F10+ TGATTCAGGAACGCATTGAAAAGTACTCGAGAAATGAAATTAGGTTCA
____________________________________________________________
consensus GGTGCAG-CCAGTGATTCAGGAACGCATTGAAAAGTACTCGAGAAATGAAATTAGGTTCA
. : . : . : . : . : . :
rJMSF025D15+ ACCTGATGGCCGTAATAAAGAACAGGAAAGACATGTATACAGCCGAGCTAAAGGAGCTTC
rJMSF010C16+ ACCTGATGGCCGTAATAAAGAACAGGAAAGACATGTATACAGCCGAGCTAAAGGAGCTTC
rJMSF003E14+ ACCTGATGGCCGTAATAAAGAACAGGAAAGACATGTATACAGCCGAGCTAAAGGAGCTTC
JMFN031H01+ ACCTGATGGCCGTAATAAAGAACAGGAAAGACATGTATACAGCCGAGCTAAAGGAGCTTC
rJMFF001L11+ ACCTGATGGCCGTAATAAAGAACAGGAAAGACATGTATACAGCCGAGCTAAAGGAGCTTC
rJMFF030F10+ ACCTGATGGCCGTAATAAAGAACAGGAAAGACATGTATACAGCCGAGCTAAAGGAGCTTC
____________________________________________________________
consensus ACCTGATGGCCGTAATAAAGAACAGGAAAGACATGTATACAGCCGAGCTAAAGGAGCTTC
. : . : . : . : . : . :
rJMSF025D15+ AAAGAAAAAGGGAACGCATCCTGCAGCAACTGGCTACTTTACAGTCGGAGAGGCTGGTCG
rJMSF010C16+ AAAGAAAAAGGGAACGCATCCTGCAGCAACTGGCTACTTTACAGTCGGAGAGGCTGGTCG
rJMSF003E14+ AAAGAAAAAGGGAACGCATCCTGCAGCAACTGGCTACTTTACAGTCGGAGAGGCTGGTCG
JMFN031H01+ AAAGAAAAAGGGAACGCATCCTGCAGCAACTGGCTACTTTACAGTCGGAGAGGCTGGTCG
rJMFF001L11+ AAAGAAAAAGGGAACGCATCCTGCAGCAACTGGCTACTTTACAGTCGGAGAGGCTGGTCG
rJMFF030F10+ AAAGAAAAAGGGAACGCATCCTGCAGCAACTGGCTACTTTACAGTCGGAGAGGCTGGTCG
____________________________________________________________
consensus AAAGAAAAAGGGAACGCATCCTGCAGCAACTGGCTACTTTACAGTCGGAGAGGCTGGTCG
. : . : . : . : . : . :
rJMSF025D15+ ATAGCAGCAATGTGGAAGCTCTGAATAAATCACTAATGGAAGTGAATTCTGGCATTGAAG
rJMSF010C16+ ATAGCAGCAATGTGGAAGCTCTGAATAAATCACTAATGGAAGTGAATTCTGGCATTGAAG
rJMSF003E14+ ATAGCAGCAATGTGGAAGCTCTGAATAAATCACTAATGGAAGTGAATTCTGGCATTGAAG
JMFN031H01+ ATAGCAGCAATGTGGAAGCTCTGAATAAATCACTAATGGAAGTGAATTCTGGCATTGAAG
rJMFF001L11+ ATAGCAGCAATGTGGAAGCTCTGAATAAATCACTAATGGAAGTGAATTCTGGCATTGAAG
rJMFF030F10+ ATAGCAGCAATGTGGAAGCTCTGAATAAATCACTAATGGAAGTGAATTCTGGCATTGAAG
____________________________________________________________
consensus ATAGCAGCAATGTGGAAGCTCTGAATAAATCACTAATGGAAGTGAATTCTGGCATTGAAG
. : . : . : . : . : . :
rJMSF025D15+ CGGCCACCGAGAAGATATTGATGGAGGAAGAGAAATTCAAGAAATGGAAAACAGAAAACA
rJMSF010C16+ CGGCCACCGAGAAGATATTGATGGAGGAAGAGAAGTTCAAGAAATGGAAAACAGAAAACA
rJMSF003E14+ CGGCCACCGAGAAGATATTGATGGAGGAAGAGAAGTTCAAGAAATGGAAAACAGAAAACA
JMFN031H01+ CGGCCACCGAGAAGATATTGATGGAGGAAGAGAAGTTCAAGAAATGGAAAACAGAAAACA
rJMFF001L11+ CGGCCACCGAGAAGATATTGATGGAGGAAGAGAAGTTCAAGAAATGGAAAACAGAAAACA
rJMFF030F10+ CGGCCACCGAGAAGATATTGATGGAGGAAGAGAAGTTCAAGAAATGGAAAACAGAAAACA
____________________________________________________________
consensus CGGCCACCGAGAAGATATTGATGGAGGAAGAGAAGTTCAAGAAATGGAAAACAGAAAACA
. : . : . : . : . : . :
rJMSF025D15+ TTCGCCGAAAGCACAACTACATTCCCTTCCTGTTCAACTTCCTCAAGATTCTTGCTGAAA
rJMSF010C16+ TTCGCCGAAAGCACAACTACATTCCCTTCCTGTTCAACTTCCTCAAGATTCTTGCTGAAA
rJMSF003E14+ TTCGCCGAAAGCACAACTACATTCCCTTCCTGTTCAACTTCCTCAAGATTCTTGCTGAAA
JMFN031H01+ TTCGCCGAAAGCACAACTACATTCCCTTCCTGTTCAACTTCCTCAAGATTCTTGCTGAAA
rJMFF001L11+ TTCGCCGAAAGCACAACTACATTCCCTTCCTGTTCAACTTCCTCAAGATTCTTGCTGAAA
rJMFF030F10+ TTCGCCGAAAGCACAACTACATTCCCTTCCTGTTCAACTTCCTCAAGATTCTTGCTGAAA
____________________________________________________________
consensus TTCGCCGAAAGCACAACTACATTCCCTTCCTGTTCAACTTCCTCAAGATTCTTGCTGAAA
. : . : . : . : . : . :
rJMSF025D15+ AGAAGCAGTTGAGACCTCTCATAGAGAAGGCCAAACAAAAAGCTAGCAAATCCTAGGTGA
rJMSF010C16+ AGAAGCAGTTGAGACCTCTCATAGAGAAGGCCAAACAAAAAGCTAGCAAATCCTAGGTGA
rJMSF003E14+ AGAAGCAGTTGAGACCTCTCATAGAGAAGGCCAAACAAAAAGCTAGCAAATCCTAGGTGA
JMFN031H01+ AGAAGCAGTTGAGACCTCTCATAGAGAAGGCCAAACAAAAAGCTAGCAAATCCTAGGTGA
rJMFF001L11+ AGAAGCAGTTGAGACCTCTCATAGAGAAGGCCAAACAAAAAGCTAGCAAATCCTAGGTGA
rJMFF030F10+ AGAAGCAGTTGAGACCTCTCATAGAGAAGGCCAAACAAAAAGCTAGCAAATCCTAGGTGA
____________________________________________________________
consensus AGAAGCAGTTGAGACCTCTCATAGAGAAGGCCAAACAAAAAGCTAGCAAATCCTAGGTGA
. : . : . : . : . : . :
rJMSF025D15+ AAAGAC
rJMSF010C16+ AAAGACAAATGTACAACAACTTTATTAGACAACAATCTTGGTTGCTGAATTGTATTATGT
rJMSF003E14+ AAAGACAAATGTACAACAACTTTATTAGACAACAATCTTGGTTGCTGAATTGTATTATGT
JMFN031H01+ AAAGACAAATGTACAACAACTTTATTAGACAACAATCTTGGTTGCTGAATTGTATTATGT
rJMFF001L11+ AAAGACAAATGTACAACAACTTTATTAGACAACAATCTTGGTTGCTGAATTGTATTATGT
rJMFF030F10+ AAAGACAAATGTACAACAACTTTATTAGACAACAATCTTGGTTGCTGAATTGTATTATGT
____________________________________________________________
consensus AAAGACAAATGTACAACAACTTTATTAGACAACAATCTTGGTTGCTGAATTGTATTATGT
. : . : . : . : . : . :
rJMSF010C16+ ACTGTTATTTAACCACCCCAAGGTTTGCTTAGCACCCATGATTTTCTTATATTGCGTA
rJMSF003E14+ ACTGTTATTTAACCACCCCAAGGTTTGCTTAGCACCCATGATTTTCTTATATTGCGTAT
JMFN031H01+ ACTGTTATTTAACCACCCCAAGGTTTGCTTAGCACCCATGATTTTCTTATATTGCGTATT
rJMFF001L11+ ACTGTTATTTAACCACCCCAAGGTTTGCTTAGCACCCATGATTTTCTTATATTGCGTATT
rJMFF030F10+ ACTGTTATTTAACCACCCCAAGGTTTGCTTAGCACCCATGATTTTCTTATATTGCGTATT
____________________________________________________________
consensus ACTGTTATTTAACCACCCCAAGGTTTGCTTAGCACCCATGATTTTCTTATATTGCGTATT
. : . : . : . : . : . :
JMFN031H01+ TTAGT
rJMFF001L11+ TTAGTAACTATTACCTTAAAATGAAATTCTGCATCTTCATCAAGTGGTTTGATTTGCTGC
rJMFF030F10+ TTAGTAACTATTACCTTAAAATGAAATTCTGCATCTTCATCAAGTGGTTTGATTTGCTGC
____________________________________________________________
consensus TTAGTAACTATTACCTTAAAATGAAATTCTGCATCTTCATCAAGTGGTTTGATTTGCTGC
. : . : . : . : . : . :
rJMFF001L11+ TGCAGCAGTGTCTTCTCGTTTCACGCTTTTAATGATTTTGATTTGCACTCATGCTTCATT
rJMFF030F10+ TGCAGCAGTGTCTTCTCGTTTCACGCTTTTAATGATTTTGATTTGCACTCATGCTTCATT
____________________________________________________________
consensus TGCAGCAGTGTCTTCTCGTTTCACGCTTTTAATGATTTTGATTTGCACTCATGCTTCATT
. : . : . : . : . : . :
rJMFF001L11+ CCTCTACTGTCGAGGAGATGAACAAAAGCCTGTATAAT
rJMFF030F10+ CCTCTACTGTCGAGGAGATGAACAAAAGCCTGTATAATACTCTCTATGTCCTACTTTACT
____________________________________________________________
consensus CCTCTACTGTCGAGGAGATGAACAAAAGCCTGTATAATACTCTCTATGTCCTACTTTACT