clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF011G17 | Sequence | 587 | 005451 (10) | ref|NP_001240074.1| | 6e-39 | uncharacterized protein LOC100776785 [Glycine max] gb|ACU23474.1| unknown [Glyci | 531 | 005451 (10) | |||
JMFF029O19 | Sequence | 729 | 005451 (10) | ||||||||
JMFF035C15 | Sequence | 528 | 005451 (10) | emb|CBI36325.3| | 3e-38 | unnamed protein product [Vitis vinifera] | 672 | 005451 (10) | |||
JMSF007J21 | Sequence | 320 | 005451 (10) | emb|CBI36325.3| | 6e-29 | unnamed protein product [Vitis vinifera] | 774 | 005451 (10) | |||
JMSF008J21 | Sequence | 315 | 018845 | ref|WP_044275426.1| | 5e-13 | hypothetical protein [Pseudomonas fluorescens] | 666 | 005451 (10) | |||
JMSF019F13 | Sequence | 583 | 005451 (10) | ref|NP_001240074.1| | 5e-37 | uncharacterized protein LOC100776785 [Glycine max] gb|ACU23474.1| unknown [Glyci | 629 | 012083 (20) | gb|AAD13216.1| | 3e-58 | latex-abundant protein [Hevea brasiliensis] |
JMSF050D24 | Sequence | 659 | 014777 | 722 | 005451 (10) | emb|CDO98152.1| | 2e-09 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMFF035C15- GTAGAGCTTTCTAGTTTCTAGCATTTAGAGAGAGAGAG
JMSF019F13- GGGACCAGTGGCACGTATGTGAGTAGAGCTTTCTAGTTTCTAGCATTTAGAGAGAGAGAG
____________________________________________________________
consensus GGGACCAGTGGCACGTATGTGAGTAGAGCTTTCTAGTTTCTAGCATTTAGAGAGAGAGAG
. : . : . : . : . : . :
JMSF007J21- GAGAGAGGAACAGAGCTGGTAGCTAGTCCTGCGTTTTTCTTTGATTGGGGGAGACGAAA
JMFF035C15- AGAGAGAGGAACAGAGCTGGTAGCTAGTCCTGCGTTTTTCTTTGATT-GGGGAGACGAAA
JMSF019F13- AGAGAGAGGAACAGAGCTGGTAGCTAGTCCTGCGTTTTTCTTTGATT-GGGGAGACGAAA
JMFF011G17- AGCTAGTCCTGCGTTTTTCTTTGATT-GGGGAGACGAAA
____________________________________________________________
consensus AGAGAGAGGAACAGAGCTGGTAGCTAGTCCTGCGTTTTTCTTTGATT-GGGGAGACGAAA
. : . : . : . : . : . :
JMSF007J21- ATGGCGAATTCTGAAGAAAAGATGGCTCAAAACCTGACTGAAGGAACAGATGGAGTTCTC
JMFF035C15- ATGGCGAATTCTGAAGAAAAGATGGCTCAAAACCTGACTCAAGGAACAGATGGAGTTCTC
JMSF019F13- ATGGCGAATTCTGAAGAAAAGATGGCTCAAAACCTGACTCAAGGAACAGATGGAGTTCTC
JMFF011G17- ATGGCGAATTCTGAAGAAAAGATGGCTCAAAACCTGACTCAAGGAACAGATGGAGTTCTC
____________________________________________________________
consensus ATGGCGAATTCTGAAGAAAAGATGGCTCAAAACCTGACTCAAGGAACAGATGGAGTTCTC
. : . : . : . : . : . :
JMSF007J21- TCTGTGGAGCTTCCTGCACCTCCTTCTTGGAAGAAATTGTTAATGCATAGTGGAGGCAAG
JMFF035C15- TCTGTGGAGCTTCCTGCACCTCCTTCTTGGAAGAAATTGTTAATGCATAGTGGAGGCAAG
JMSF019F13- TCTGTGGAGCTTCCTGCACCTCCTTCTTGGAAGAAATTGTTAATGCATAGTGGAGGCAAG
JMFF011G17- TCTGTGGAGCTTCCTGCACCTCCTTCTTGGAAGAAATTGTTAATGCATAGTGGAGGCAAG
____________________________________________________________
consensus TCTGTGGAGCTTCCTGCACCTCCTTCTTGGAAGAAATTGTTAATGCATAGTGGAGGCAAG
. : . : . : . : . : . :
JMSF007J21- GTTGTGTTTATTGCTCCCACTGGGGAAGAGATCACTAGCAAGAGACAGTTAAGCCAGTAT
JMFF035C15- GTTGTGTTTATTGCTCCCACTGGGGAAGAGATCACTAGCAAGAGACAGTTAAGCCAGTAT
JMSF019F13- GTTGTGTTTATTGCTCCCACTGGGGAAGAGATCACTAGCAAGAGACAGTTAAGCCAGTAT
JMFF011G17- GTTGTGTTTATTGCTCCCACTGGGGAAGAGATCACTAGCAAGAGACAGTTAAGCCAGTAT
____________________________________________________________
consensus GTTGTGTTTATTGCTCCCACTGGGGAAGAGATCACTAGCAAGAGACAGTTAAGCCAGTAT
. : . : . : . : . : . :
JMSF007J21- CTGAAATCACACCCTGGTAATCCTGCACCATCCAGCTTTGATTGGGGTACTGGTGATACT
JMFF035C15- CTGAAATCACACCCTGGTAATCCTGCACCATCCAGCTTTGATTGGGGTACTGGTGATACT
JMSF019F13- CTGAAATCACACCCTGGTAATCCTGCACCATCCAGCTTTGATTGGGGTACTGGTGATACT
JMFF011G17- CTGAAATCACACCCTGGTAATCCTGCACCATCCAGCTTTGATTGGGGTACTGGTGATACT
rJMSF050D24+ CT
____________________________________________________________
consensus CTGAAATCACACCCTGGTAATCCTGCACCATCCAGCTTTGATTGGGGTACTGGTGATACT
. : . : . : . : . : . :
JMSF007J21- CCNAGAAGATCTGCAAGGAT
JMFF035C15- CCAAGAAGATCTGCAAGGATCAGTGGAAAGGTCAAGGCCAATCCCTCCCCTTCAGAGACC
JMSF019F13- CCAAGAAGATCTGCAAGGATCAGTGGAAAGGTCAAGGCCAATCCCTCCCCTTCAGAGACC
JMFF011G17- CCAAGAAGATCTGCAAGGATCAGTGGAAAGGTCAAGGCCAATCCCTCCCCTTCAGAGACC
rJMSF050D24+ CCNAGAAGATCTGCAAGGATCAGTGGAAAGGTCAAGGCCAATCCTTCCCCTTCAGAGACC
____________________________________________________________
consensus CCAAGAAGATCTGCAAGGATCAGTGGAAAGGTCAAGGCCAATCCCTCCCCTTCAGAGACC
. : . : . : . : . : . :
JMFF035C15- GAGATGCCCAAGAAACGACGTAGAATGTCATCTGGAAGAAAGGATAGCCAGCAGGAAACC
JMSF019F13- GAGATGCCCAAGAAACGACGTANAATGTCATCTGGAAGAAAGGATAGCCAGCAGGAAACC
JMFF011G17- GAGATGCCCAAGAAACGACGTAGAATGTCATCTGGAAGAAAGGATAGCCAGCAGGAAACC
rJMSF050D24+ GAGATGCCCAAGAAACGACGTAGAATGTCATCTGGAAGAAAGGATAGCCAGCAGGAAACC
rJMSF007J21+ GACGTAGAGTGTCATCTGGAAGAAAGGATAGCCAGCAGGAAACC
____________________________________________________________
consensus GAGATGCCCAAGAAACGACGTAGAATGTCATCTGGAAGAAAGGATAGCCAGCAGGAAACC
. : . : . : . : . : . :
JMFF035C15- GGTGAAACTGAGAGCGTGGAGATGAAAGATCTGGCAGCTTCGAACGAAGAGGGTGTGAAA
JMSF019F13- GGTGAAACTGAGAGCGTGGAGATGAAAGATCTGGCAGCTTCGAACGAAGAGGGTGTGAAA
JMFF011G17- GGTGAAACTGAGAGCGTGGAGATGAAAGATCTGGCAGCTTCGAACGAAGAGGGTGTGAAA
rJMSF050D24+ GGTGAAACTGAGAGCGTGGAGATGAAAGATCTGGCAGCTTCGAACGAAGAGGGTGTGAAA
rJMFF035C15+ GAGATGAAAGATCTGGCAGCTTGGAACGAAGAGGGTGTGAAA
rJMSF007J21+ GGTGAAACTGAGAGCGTGGAGAAGAAAAATCTGGCAGCTTCGAACGAAGAGGGTGTGAAA
rJMFF029O19+ GAAGAGGGTGTGAAA
____________________________________________________________
consensus GGTGAAACTGAGAGCGTGGAGATGAAAGATCTGGCAGCTTCGAACGAAGAGGGTGTGAAA
. : . : . : . : . : . :
JMFF035C15- GAAGTCGAAAC
JMSF019F13- GAAGTCGAAACTCCAAATGTTGAATCCACTGAACATGAGGGTGT
JMFF011G17- GAAGTCGAAACTCCAAATGTTGAATCCACTGAACATGAGGGTGTGGAGAAAGGAAATATA
rJMSF050D24+ GAAGTCGAAACTCCAAATGTTGAATCCACTGAACATGAGGGTGTGGAGAAAGGAAATATA
rJMFF035C15+ GAAGTCGAAACTCCAAATGTTGAATCCACTGAACATGAGGGTGTGGAGAAAGGAAATATA
rJMSF007J21+ GAAGTCGAAACTCCAAATGTTGAATCCGCTGAACATGAGGGTGTGGAGAAAGGAAATATA
rJMSF008J21+ TCCAAATGTTGAATCCGCTGAACATGAGGGTGTGGAGAAAGGAAATATA
rJMFF029O19+ GAAGTCGAAACTCCAGATGTTGAATCCACTGAACATGAGGGTGTGGAGAAAGGAAATATA
____________________________________________________________
consensus GAAGTCGAAACTCCAAATGTTGAATCCACTGAACATGAGGGTGTGGAGAAAGGAAATATA
. : . : . : . : . : . :
JMFF011G17- ACCACACAGATTCAAGGTGAAACTGAAGATAATAATCTGCAAGATGGCGCTGAAAAGGAA
rJMSF050D24+ ACCACACAGATTCAAGGTGAAACTGAAGATAATAATCTGCAAGATGGCGCTGAAAAGGAA
rJMFF035C15+ ACCACACAGATTCAAGGTGAAACTGAAGATAATAATCTGCAAGATGGCGCTGAAAAGGAA
rJMSF007J21+ ACCACACAGTTTCAAGGTGAAACTGAAGATAATAATCTGCAAGATGGTGCTGAAAAGGAA
rJMSF008J21+ ACCACACAGTTTCAAGGTGAAACTGAAGATAATAATCTGCAAGATGGTGCTGAAAAGGAA
rJMFF011G17+ AAGGTGAAGCTGANGATAATAATCTGCAAGATGGCGNTGAAAAGGAA
rJMFF029O19+ NCCACACAGATTCAAGGTGAAACTGAAGATAATAATCTGCAAGATGGCGCTGAAAAGGAA
____________________________________________________________
consensus ACCACACAGATTCAAGGTGAAACTGAAGATAATAATCTGCAAGATGGCGCTGAAAAGGAA
. : . : . : . : . : . :
JMFF011G17- AATGCATCA
rJMSF050D24+ AATGCATCAGAGGTTGAGGTCGAGGTT------GGGGGAAACGCTAGTACTAAAGATGGG
rJMFF035C15+ AATGCATCAGAGGTTGAGGTCGAGGTT------GGGGGAAACGCTAGTACTAAAGATGGG
rJMSF007J21+ AATGCATCAGAGGTTGAGGTTGAGGTTGAGGTCGGGGGAAACGCTAGTACTAAAGATGGG
rJMSF008J21+ AATGCATCAGAGGTTGAGGTTGAGGTTGAGGTCGGGGGAAACGCTAGTACTAAAGATGGG
rJMFF011G17+ AATGCATCAGAGGTTGAGGTCGAGGTT------GGGGGAAACGNTAGTANTAAAGATGGG
rJMFF029O19+ AATGCATCAGAGGTTGAGGTCGAGGTT------GGGGGAAACGCTAGTACTAAAGATGGG
____________________________________________________________
consensus AATGCATCAGAGGTTGAGGTCGAGGTT------GGGGGAAACGCTAGTACTAAAGATGGG
. : . : . : . : . : . :
rJMSF050D24+ AATACCTTGGATGGCTCCAAGGATGGAAACGACGGGACATCCTGGGAGGCAAATAAGACT
rJMFF035C15+ AATACCTTGGATGGCTCCAAGGATGGAAACGACGGGACATCCTGGGAGGCAAATAAGACT
rJMSF007J21+ AATACCTTGGATGGCTCCAAGGATGGAAACTACGGGACATCCTGGGAGGCAAATAAGACT
rJMSF008J21+ AATACCTTGGATGGCTCCAAGGATGGAAACTACGGGACATCCTGGGAGGCAAATAAGACT
rJMFF011G17+ ANTACCTTGGATGGCTCCAAGGATGGAAACGNCGNGNCATCNTGGGAGGCAAATAAGNCT
rJMFF029O19+ AATACCTTGGATGGCTCCAAGGATGGAAACGACGGGACATCCTGGGAGGCAAATAAGACT
____________________________________________________________
consensus AATACCTTGGATGGCTCCAAGGATGGAAACGACGGGACATCCTGGGAGGCAAATAAGACT
. : . : . : . : . : . :
rJMSF050D24+ GAACAAGTTTCAAGTGCAGAAGGTAAAGCTGAAGGGAAACTGGGATCTGGAGAAGCCCCA
rJMFF035C15+ GAACAAGTTTCAAGTGCAGAAGGTAAAGCTGAAGGGAAACTGGGATCTGGAGAAGCCCCA
rJMSF007J21+ GAACAAGCTTCAAGGGCAGAAGGTAAAGCTGAAGGGAAACCGGGATCTGGAGAAGCCCCA
rJMSF008J21+ GAACAAGCTTCAAGGGCAGAAGGTAAAGCTGAAGGGAAACCGGGATCTGGAGAAGCCCCA
rJMFF011G17+ GAACAAGTTTCAAGTGCAGAAGGTAAAGCTGAAGGGAANCTGNGATNTGGAGAAGCCCCA
rJMFF029O19+ GAACAAGTTTCAAGTGCAGAAGGTAAAGCTGAAGGGAAACTGGGATCTGGAGAAGCCCCA
____________________________________________________________
consensus GAACAAGTTTCAAGTGCAGAAGGTAAAGCTGAAGGGAAACTGGGATCTGGAGAAGCCCCA
. : . : . : . : . : . :
rJMSF050D24+ GAGAAGGAGAGTTCTGCTGCAGTGGAAGATGAAACGAAGGAAATCCAGGAAAACGATAGC
rJMFF035C15+ GAGAAGGAGAGTTCTGCTGCAGTGGAAGATGAAACGAAGGAAATCCAGGAAAACGATAGC
rJMSF007J21+ GAGAAGGAGAGTTCTGCTGCAATGGAAGATGAAACGAAGGAAATCCAGGAAAACGATAGC
rJMSF008J21+ GAGAAGGAGAGTTCTGCTGCAATGGAAGATGAAACGAAGGAAATCCAGGAAAACGATAGC
rJMFF011G17+ GAGAAGGAGAGTTCTGCTGCAGTGGAAGATGANACGAAGGAANTCCAGGAAAANGATAGN
rJMFF029O19+ GAGAAGGAGAGTTCTGCTGCAGTGGAAGATGAAACGAAGGAAATCCAGGAAAACGATAGC
____________________________________________________________
consensus GAGAAGGAGAGTTCTGCTGCAGTGGAAGATGAAACGAAGGAAATCCAGGAAAACGATAGC
. : . : . : . : . : . :
rJMSF050D24+ GAATTGAAGTTGCAGGAAGAGAAGGCCGGAAATAGTAGGAATGGGTTGGTCCAGGGGTTC
rJMFF035C15+ GAATTGAAGTTGCAGGAAGAGAAGGCCGGAAATAGTAGGAATGGGTTGGTCCAGGGGTTC
rJMSF007J21+ GAATTGAAGTTGCAGGAAGAGAAGGCCGGAAATAGTAGGAACGGGTTGTTCCAGGGGTTC
rJMSF008J21+ GAATTGAAGTTGCAGGAAGAGAAGGCCGGAAATAGTAGGAACGGGTTGTTCCAGGGGTTC
rJMFF011G17+ GAATNGAAGNTGCAGGAAGAGAAGGCCGGAAATAGTAGGAATGGGTTGNTCCAGGGGTTC
rJMFF029O19+ GAATTGAAGTTGCAGGAAGAGAAGGCCGGAAATAGTAGGAATGGGTTGGTCCAGGGGTTC
____________________________________________________________
consensus GAATTGAAGTTGCAGGAAGAGAAGGCCGGAAATAGTAGGAATGGGTTGGTCCAGGGGTTC
. : . : . : . : . : . :
rJMSF050D24+ GCGAATACCCCACACCATCCCTCTCCTGCACCAATTAGCTGCTAAACACAACATGTTTAT
rJMFF035C15+ GCGAATACCCCACACCATCCCTCTCCTGCACCAATTAGCTGCTAAACACAACATGTTTAT
rJMSF007J21+ GCGAATACCCCACACCATCCCTCTCCTGCACCAATTAGCTGCTAAACACAACATGTTTAT
rJMSF008J21+ GCGAATACCCCACACCATCCCTCTCCTGCACCAATTAGCTGCTAAACACAACATGTTTAT
rJMFF011G17+ GAGAATACCCCACACCATNCNTCTCCTGCACCAATTAGCTGNTNANCACAACATGNTTAT
rJMFF029O19+ GCGAATACCCCACACCATCCCTCTCCTGCACCAATTAGCTGCTAAACACAACATGTTTAT
____________________________________________________________
consensus GCGAATACCCCACACCATCCCTCTCCTGCACCAATTAGCTGCTAAACACAACATGTTTAT
. : . : . : . : . : . :
rJMSF050D24+ CTAGATTGTGTCCAGTCTCATCTGCATTGTATTGTTCATCCTTTATAATCCTTTTGATTA
rJMFF035C15+ CTAGATTGTGTCCAGTCTCATCTGCATTGTATTGTTCATCCTTTATAATCCTTTTGATTA
rJMSF007J21+ CTAGATTGTGTCCAGTCTCATCTGCATTGTATTGTTCATCCTTTATAATCCTTTTGATTA
rJMSF008J21+ CTAGATTGTGTCCAGTCTCATCTGCATTGTATTGTTCATCCTTTATAATCCTTTTGATTA
rJMFF011G17+ GTAGATTGTNTCCAGTNTCATCNGCATNGTATTGTTCATCCNTTATNATCCTTNTGATTN
rJMFF029O19+ CTAGATTGTGTCCAGTCTCATCTGCATTGTATTGTTCATCCTTTATAATCCTTTTGATTA
____________________________________________________________
consensus CTAGATTGTGTCCAGTCTCATCTGCATTGTATTGTTCATCCTTTATAATCCTTTTGATTA
. : . : . : . : . : . :
rJMSF050D24+ C
rJMFF035C15+ CTGTAATATTAATGAGACTATCAGTGGTAGGCTTCGTTGTTACTTGTTAGGATATTACCT
rJMSF007J21+ CTGTAATATTAATGAGACTATCAGTGGTAGGCTTCGTTGTTACTTGTTAGGATATTACCT
rJMSF008J21+ CTGTAATATTAATGAGACTATCAGTGGTAGGCTTCGTTGTTACTTGTTAGGATNTTACCT
rJMFF011G17+ CTGTAATANTAATGAGANNATCAGTGGTAGGCTTCGTTGTTACTTGNTAGGATANTACCN
rJMFF029O19+ CTGTAATATTAATGAGACTATCAGTGGTAGGCTTCGTTGTTACTTGTTAGGATATTACCT
____________________________________________________________
consensus CTGTAATATTAATGAGACTATCAGTGGTAGGCTTCGTTGTTACTTGTTAGGATATTACCT
. : . : . : . : . : . :
rJMFF035C15+ TTATAGGACTTTCTATGTTTCTGCCATA
rJMSF007J21+ TTATAGGACTTTCTATGTTTCTGCCATA
rJMSF008J21+ TTATAGGACTTTCTATGTTTCTGCCATA
rJMFF011G17+ TNATAGGACT
rJMFF029O19+ TTATAGGACTTTCTATGTTTCTGCCATAGCCAGCTATGTGAACTTATGTGTTTGTAGTAG
____________________________________________________________
consensus TTATAGGACTTTCTATGTTTCTGCCATAGCCAGCTATGTGAACTTATGTGTTTGTAGTAG
. : . : . : . : . : . :
rJMFF029O19+ ATATACTGACTTGCAATACTTGTGCATGTTTGTGTTCAAGAATTGGCTTTGTTCCGTTGA
____________________________________________________________
consensus ATATACTGACTTGCAATACTTGTGCATGTTTGTGTTCAAGAATTGGCTTTGTTCCGTTGA