Contig 005433:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026M12Sequence520000144 (3)ref|XP_009601706.1|2e-26PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Nicotiana tomentosiformis]754005433 (3)ref|XP_006350542.1|8e-135PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Solanum tuberosum]
JMFF031P23Sequence555000144 (3)ref|XP_009601706.1|7e-35PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Nicotiana tomentosiformis]636005433 (3)ref|XP_004502650.1|7e-107PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Cicer arietinum]
JMSF007N18Sequence282000144 (3)781005433 (3)ref|XP_006350542.1|2e-150PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF007N18+ CGGAGTCGCTTGAACTTCCCTGCAGATATTTTTC
                      ____________________________________________________________
consensus CGGAGTCGCTTGAACTTCCCTGCAGATATTTTTC
 
. : . : . : . : . : . :
rJMSF007N18+ ATTGGGGTGTCCAGAAATATTCCCATATTACAGCAAGCTTAAACATGAGACAATTTGCAA
rJMFF026M12+ ATTACAGCAAGCTTAAACATGAGACAATTTGCAA
                      ____________________________________________________________
consensus ATTGGGGTGTCCAGAAATATTCCCATATTACAGCAAGCTTAAACATGAGACAATTTGCAA
 
. : . : . : . : . : . :
rJMSF007N18+ TTTTAGACCATACAATTGCCCATACGCTGGATCAGAGTGTTCAGTTACCGGTGATATACC
rJMFF026M12+ TTTTAGACCATACAATTGCCCATACGCTGGATCAGAGTGTTCAGTTACCGGTGATATACC
                      ____________________________________________________________
consensus TTTTAGACCATACAATTGCCCATACGCTGGATCAGAGTGTTCAGTTACCGGTGATATACC
 
. : . : . : . : . : . :
rJMSF007N18+ TTACCTCGTTTCTCATTTGAGAGATGACCACAAGGTTGACATGCACACGGGATGCACATT
rJMFF031P23+ TGAGAGATGACCACAAGGTTGACATGCACACGGGATGCACATT
rJMFF026M12+ TTACCTCGTTTCTCATTTGAGAGATGACCACAAGGTTGACATGCACACGGGATGCACATT
                      ____________________________________________________________
consensus TTACCTCGTTTCTCATTTGAGAGATGACCACAAGGTTGACATGCACACGGGATGCACATT
 
. : . : . : . : . : . :
rJMSF007N18+ CAACCATCGATATGTCAAGTCTAATCCGCGGGAAGTCGAAAATGCCACATGGATGCTGAC
rJMFF031P23+ CAACCATCGATATGTCAAGTCTAATCCGCGGGAAGTCGAAAATGCCACATGGATGCTGAC
rJMFF026M12+ CAACCATCGATATGTCAAGTCTAATCCGCGGGAAGTCGAAAATGCCACATGGATGCTGAC
                      ____________________________________________________________
consensus CAACCATCGATATGTCAAGTCTAATCCGCGGGAAGTCGAAAATGCCACATGGATGCTGAC
 
. : . : . : . : . : . :
rJMSF007N18+ TGTCTTCCACTGTTTTGGTCAGTACTTCTGTCTTCACTTTGAGGCCTTCCAGCTCGGCAT
rJMFF031P23+ TGTCTTCCACTGTTTTGGTCAGTACTTCTGTCTTCACTTTGAGGCCTTCCAGCTCGGCAT
rJMFF026M12+ TGTCTTCCACTGTTTTGGTCAGTACTTCTGTCTTCACTTTGAGGCCTTCCAGCTCGGCAT
                      ____________________________________________________________
consensus TGTCTTCCACTGTTTTGGTCAGTACTTCTGTCTTCACTTTGAGGCCTTCCAGCTCGGCAT
 
. : . : . : . : . : . :
rJMSF007N18+ GGCACCTGTTTACATGGCTTTTGTCCGCTTCATGGGCGACGAGACTGAAGCCCGCAATTA
rJMFF031P23+ GGCACCTGTTTACATGGCTTTTGTCCGCTTCATGGGCGACGAGACTGAAGCCCGCAATTA
rJMFF026M12+ GGCACCTGTTTACATGGCTTTTGTCCGCTTCATGGGCGACGAGACTGAAGCCCGCAATTA
                      ____________________________________________________________
consensus GGCACCTGTTTACATGGCTTTTGTCCGCTTCATGGGCGACGAGACTGAAGCCCGCAATTA
 
. : . : . : . : . : . :
rJMSF007N18+ CAGCTACAGTCTTGAAGTAGGAGGAAGCGGTAGAAAGCTAATATGGGAAGGTACTCCAAG
rJMFF031P23+ CAGCTACAGTCTTGAAGTAGGAGGAAGCGGTAGAAAGCTAATATGGGAAGGTACTCCAAG
rJMFF026M12+ CAGCTACAGTCTTGAAGTAGGAGGAAGCGGTAGAAAGCTAATATGGGAAGGTACTCCAAG
                      ____________________________________________________________
consensus CAGCTACAGTCTTGAAGTAGGAGGAAGCGGTAGAAAGCTAATATGGGAAGGTACTCCAAG
 
. : . : . : . : . : . :
rJMSF007N18+ AAGTACCCGAGACAGCCACCGCAAGGTGAGGGACAGCCACGATGGCCTTATCATTCAACG
rJMFF031P23+ AAGTACCCGAGACAGCCACCGCAAGGTGAGGGACAGCCACGATGGCCTTATCATTCAACG
rJMFF026M12+ AAGTACCCGAGACAGCCACCGCAAGGTGAGGGACAGCCACGATGGCCTTATCATTCAACG
                      ____________________________________________________________
consensus AAGTACCCGAGACAGCCACCGCAAGGTGAGGGACAGCCACGATGGCCTTATCATTCAACG
 
. : . : . : . : . : . :
rJMSF007N18+ TAACATGGCACTGTTCTTCTCTGGTGGGGATAGGAAGGAACTGAAGCTTAGGGTCACCGG
rJMFF031P23+ TAACATGGCACTGTTCTTCTCTGGTGGGGATAGGAAGGAACTGAAGCTTAGGGTCACCGG
rJMFF026M12+ TAACATGGCACTGTTCTTCTCTGGTGGGGATAGGAAGGAACTGAAGCTTAGGGTCACCGG
                      ____________________________________________________________
consensus TAACATGGCACTGTTCTTCTCTGGTGGGGATAGGAAGGAACTGAAGCTTAGGGTCACCGG
 
. : . : . : . : . : . :
rJMSF007N18+ GAGGATATGGAAGGAGCAGCAAAACCCAGATTCTGGTGTTTGTATACCGAATATTTGTAG
rJMFF031P23+ GAGGATATGGAAGGAGCAGCAAAACCCAGATTCTGGTGTTTGTATACCGAATATTTGTAG
rJMFF026M12+ GAGGATATGGAAGGAGCAGCAAAACCCAGATTCTGGTGTTTGTATACCGAATATTTGTAG
                      ____________________________________________________________
consensus GAGGATATGGAAGGAGCAGCAAAACCCAGATTCTGGTGTTTGTATACCGAATATTTGTAG
 
. : . : . : . : . : . :
rJMSF007N18+ CAGTTAAGCTCCCCCTTCAGCCTTCGGGAGTGATATGATTCTCCTCCATGGATTTGTGGA
rJMFF031P23+ CAGTTAAGCTCCCCCTTCAGCCTTCGGGAGTGATATGATTCTCCTCCATGGATTTGTGGA
rJMFF026M12+ CAGTTAAGCTCCCCCTTCAGCCTTCGGGAGTGATATGATTCTCCTCCATGGATTTGTGGA
                      ____________________________________________________________
consensus CAGTTAAGCTCCCCCTTCAGCCTTCGGGAGTGATATGATTCTCCTCCATGGATTTGTGGA
 
. : . : . : . : . : . :
rJMSF007N18+ TTGCTTGTTGTGTGTGTGAGAGTGTGTGAGCCTCTTTGTGTTGTTAGTAAAGTTTGTGCT
rJMFF031P23+ TTGCTTGTTGTGTGTGTGAGAGTGTGTGAGCCTCTTTGTGTTGTTAGTAAAGTTTGTGCC
rJMFF026M12+ TTGCTTGTTGTGTGTGTGAGAGTGTGTGAGCCTCTTTGTGTTGTTAGTAAAGTTTGTGCC
                      ____________________________________________________________
consensus TTGCTTGTTGTGTGTGTGAGAGTGTGTGAGCCTCTTTGTGTTGTTAGTAAAGTTTGTGCC
 
. : . : . : . : . : . :
rJMSF007N18+ CTGTGAATGTATTAGGATGCTGCTGCA
rJMFF031P23+ CTGTGAATGTATTAGGATGCTGCTGCATTTTCGCCATGGATGAATATATAGAG
rJMFF026M12+ CTGTGAATGTATTAGGATGCTGCTGCATTTTCGCCATGGATGAATATATAGAGTTATCAA
                      ____________________________________________________________
consensus CTGTGAATGTATTAGGATGCTGCTGCATTTTCGCCATGGATGAATATATAGAGTTATCAA