clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF026M12 | Sequence | 520 | 000144 (3) | ref|XP_009601706.1| | 2e-26 | PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Nicotiana tomentosiformis] | 754 | 005433 (3) | ref|XP_006350542.1| | 8e-135 | PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Solanum tuberosum] |
JMFF031P23 | Sequence | 555 | 000144 (3) | ref|XP_009601706.1| | 7e-35 | PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Nicotiana tomentosiformis] | 636 | 005433 (3) | ref|XP_004502650.1| | 7e-107 | PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Cicer arietinum] |
JMSF007N18 | Sequence | 282 | 000144 (3) | 781 | 005433 (3) | ref|XP_006350542.1| | 2e-150 | PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
rJMSF007N18+ CGGAGTCGCTTGAACTTCCCTGCAGATATTTTTC
____________________________________________________________
consensus CGGAGTCGCTTGAACTTCCCTGCAGATATTTTTC
. : . : . : . : . : . :
rJMSF007N18+ ATTGGGGTGTCCAGAAATATTCCCATATTACAGCAAGCTTAAACATGAGACAATTTGCAA
rJMFF026M12+ ATTACAGCAAGCTTAAACATGAGACAATTTGCAA
____________________________________________________________
consensus ATTGGGGTGTCCAGAAATATTCCCATATTACAGCAAGCTTAAACATGAGACAATTTGCAA
. : . : . : . : . : . :
rJMSF007N18+ TTTTAGACCATACAATTGCCCATACGCTGGATCAGAGTGTTCAGTTACCGGTGATATACC
rJMFF026M12+ TTTTAGACCATACAATTGCCCATACGCTGGATCAGAGTGTTCAGTTACCGGTGATATACC
____________________________________________________________
consensus TTTTAGACCATACAATTGCCCATACGCTGGATCAGAGTGTTCAGTTACCGGTGATATACC
. : . : . : . : . : . :
rJMSF007N18+ TTACCTCGTTTCTCATTTGAGAGATGACCACAAGGTTGACATGCACACGGGATGCACATT
rJMFF031P23+ TGAGAGATGACCACAAGGTTGACATGCACACGGGATGCACATT
rJMFF026M12+ TTACCTCGTTTCTCATTTGAGAGATGACCACAAGGTTGACATGCACACGGGATGCACATT
____________________________________________________________
consensus TTACCTCGTTTCTCATTTGAGAGATGACCACAAGGTTGACATGCACACGGGATGCACATT
. : . : . : . : . : . :
rJMSF007N18+ CAACCATCGATATGTCAAGTCTAATCCGCGGGAAGTCGAAAATGCCACATGGATGCTGAC
rJMFF031P23+ CAACCATCGATATGTCAAGTCTAATCCGCGGGAAGTCGAAAATGCCACATGGATGCTGAC
rJMFF026M12+ CAACCATCGATATGTCAAGTCTAATCCGCGGGAAGTCGAAAATGCCACATGGATGCTGAC
____________________________________________________________
consensus CAACCATCGATATGTCAAGTCTAATCCGCGGGAAGTCGAAAATGCCACATGGATGCTGAC
. : . : . : . : . : . :
rJMSF007N18+ TGTCTTCCACTGTTTTGGTCAGTACTTCTGTCTTCACTTTGAGGCCTTCCAGCTCGGCAT
rJMFF031P23+ TGTCTTCCACTGTTTTGGTCAGTACTTCTGTCTTCACTTTGAGGCCTTCCAGCTCGGCAT
rJMFF026M12+ TGTCTTCCACTGTTTTGGTCAGTACTTCTGTCTTCACTTTGAGGCCTTCCAGCTCGGCAT
____________________________________________________________
consensus TGTCTTCCACTGTTTTGGTCAGTACTTCTGTCTTCACTTTGAGGCCTTCCAGCTCGGCAT
. : . : . : . : . : . :
rJMSF007N18+ GGCACCTGTTTACATGGCTTTTGTCCGCTTCATGGGCGACGAGACTGAAGCCCGCAATTA
rJMFF031P23+ GGCACCTGTTTACATGGCTTTTGTCCGCTTCATGGGCGACGAGACTGAAGCCCGCAATTA
rJMFF026M12+ GGCACCTGTTTACATGGCTTTTGTCCGCTTCATGGGCGACGAGACTGAAGCCCGCAATTA
____________________________________________________________
consensus GGCACCTGTTTACATGGCTTTTGTCCGCTTCATGGGCGACGAGACTGAAGCCCGCAATTA
. : . : . : . : . : . :
rJMSF007N18+ CAGCTACAGTCTTGAAGTAGGAGGAAGCGGTAGAAAGCTAATATGGGAAGGTACTCCAAG
rJMFF031P23+ CAGCTACAGTCTTGAAGTAGGAGGAAGCGGTAGAAAGCTAATATGGGAAGGTACTCCAAG
rJMFF026M12+ CAGCTACAGTCTTGAAGTAGGAGGAAGCGGTAGAAAGCTAATATGGGAAGGTACTCCAAG
____________________________________________________________
consensus CAGCTACAGTCTTGAAGTAGGAGGAAGCGGTAGAAAGCTAATATGGGAAGGTACTCCAAG
. : . : . : . : . : . :
rJMSF007N18+ AAGTACCCGAGACAGCCACCGCAAGGTGAGGGACAGCCACGATGGCCTTATCATTCAACG
rJMFF031P23+ AAGTACCCGAGACAGCCACCGCAAGGTGAGGGACAGCCACGATGGCCTTATCATTCAACG
rJMFF026M12+ AAGTACCCGAGACAGCCACCGCAAGGTGAGGGACAGCCACGATGGCCTTATCATTCAACG
____________________________________________________________
consensus AAGTACCCGAGACAGCCACCGCAAGGTGAGGGACAGCCACGATGGCCTTATCATTCAACG
. : . : . : . : . : . :
rJMSF007N18+ TAACATGGCACTGTTCTTCTCTGGTGGGGATAGGAAGGAACTGAAGCTTAGGGTCACCGG
rJMFF031P23+ TAACATGGCACTGTTCTTCTCTGGTGGGGATAGGAAGGAACTGAAGCTTAGGGTCACCGG
rJMFF026M12+ TAACATGGCACTGTTCTTCTCTGGTGGGGATAGGAAGGAACTGAAGCTTAGGGTCACCGG
____________________________________________________________
consensus TAACATGGCACTGTTCTTCTCTGGTGGGGATAGGAAGGAACTGAAGCTTAGGGTCACCGG
. : . : . : . : . : . :
rJMSF007N18+ GAGGATATGGAAGGAGCAGCAAAACCCAGATTCTGGTGTTTGTATACCGAATATTTGTAG
rJMFF031P23+ GAGGATATGGAAGGAGCAGCAAAACCCAGATTCTGGTGTTTGTATACCGAATATTTGTAG
rJMFF026M12+ GAGGATATGGAAGGAGCAGCAAAACCCAGATTCTGGTGTTTGTATACCGAATATTTGTAG
____________________________________________________________
consensus GAGGATATGGAAGGAGCAGCAAAACCCAGATTCTGGTGTTTGTATACCGAATATTTGTAG
. : . : . : . : . : . :
rJMSF007N18+ CAGTTAAGCTCCCCCTTCAGCCTTCGGGAGTGATATGATTCTCCTCCATGGATTTGTGGA
rJMFF031P23+ CAGTTAAGCTCCCCCTTCAGCCTTCGGGAGTGATATGATTCTCCTCCATGGATTTGTGGA
rJMFF026M12+ CAGTTAAGCTCCCCCTTCAGCCTTCGGGAGTGATATGATTCTCCTCCATGGATTTGTGGA
____________________________________________________________
consensus CAGTTAAGCTCCCCCTTCAGCCTTCGGGAGTGATATGATTCTCCTCCATGGATTTGTGGA
. : . : . : . : . : . :
rJMSF007N18+ TTGCTTGTTGTGTGTGTGAGAGTGTGTGAGCCTCTTTGTGTTGTTAGTAAAGTTTGTGCT
rJMFF031P23+ TTGCTTGTTGTGTGTGTGAGAGTGTGTGAGCCTCTTTGTGTTGTTAGTAAAGTTTGTGCC
rJMFF026M12+ TTGCTTGTTGTGTGTGTGAGAGTGTGTGAGCCTCTTTGTGTTGTTAGTAAAGTTTGTGCC
____________________________________________________________
consensus TTGCTTGTTGTGTGTGTGAGAGTGTGTGAGCCTCTTTGTGTTGTTAGTAAAGTTTGTGCC
. : . : . : . : . : . :
rJMSF007N18+ CTGTGAATGTATTAGGATGCTGCTGCA
rJMFF031P23+ CTGTGAATGTATTAGGATGCTGCTGCATTTTCGCCATGGATGAATATATAGAG
rJMFF026M12+ CTGTGAATGTATTAGGATGCTGCTGCATTTTCGCCATGGATGAATATATAGAGTTATCAA
____________________________________________________________
consensus CTGTGAATGTATTAGGATGCTGCTGCATTTTCGCCATGGATGAATATATAGAGTTATCAA