Contig 005430:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026G20Sequence536007391 (14)gb|EYU32658.1|2e-66hypothetical protein MIMGU_mgv1a000733mg [Erythranthe guttata]718005430 (2)ref|XP_006360355.1|2e-61PREDICTED: 26S proteasome non-ATPase regulatory subunit 1 homolog A-like [Solan
JMFS092A12Sequence624005430 (2)ref|XP_006360355.1|2e-62PREDICTED: 26S proteasome non-ATPase regulatory subunit 1 homolog A-like [Solan

Alignment

This contig is upended


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JMFS092A12-           TACTGTACCCACAACAACATCTGCAGTAAAACTCCCCACTGCAGTTTTGTCAACCTCTGC
rJMFF026G20+            CTGTACCCACAACAACATCTGCAGTAAAACTCCCCACTGCAGTTTTGTCAACCTCTGC
                      ____________________________________________________________
consensus             TACTGTACCCACAACAACATCTGCAGTAAAACTCCCCACTGCAGTTTTGTCAACCTCTGC
 
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JMFS092A12-           AAGAGCAAAGGCCAGGGCTAGCAAGAAAGAAGCAGAGAAAGCAAATGCTGAGAAGATTTC
rJMFF026G20+          AAGAGCAAAGGCCAGGGCTAGCAAGAAAGAAGCAGAGAAAGCAAATGCTGAGAAGATTTC
                      ____________________________________________________________
consensus             AAGAGCAAAGGCCAGGGCTAGCAAGAAAGAAGCAGAGAAAGCAAATGCTGAGAAGATTTC
 
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JMFS092A12-           TGGAGCTGACTCATCCTCAGCTGGTACAACTTCTTTAAAGGGGAAGTCCACTGACAAGGA
rJMFF026G20+          TGGAGCTGACTCATCCTCAGCTGGTACAACTTCTTTAAAGGGGAAGTCCACTGACAAGGA
                      ____________________________________________________________
consensus             TGGAGCTGACTCATCCTCAGCTGGTACAACTTCTTTAAAGGGGAAGTCCACTGACAAGGA
 
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JMFS092A12-           TGGAGAATCTATGCAGCAGGTGGATATTCCTGCAGAAAAGAAGACAGAACCGGAGCCATC
rJMFF026G20+          TGGAGAATCTATGCAGCAGGTGGATATTCCTGCAGAAAAGAAGACAGAACCGGAGCCATC
                      ____________________________________________________________
consensus             TGGAGAATCTATGCAGCAGGTGGATATTCCTGCAGAAAAGAAGACAGAACCGGAGCCATC
 
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JMFS092A12-           TTTTGAAATTTTGACGAATCCTGCCAGGGTGGTTCCAGCACAAGAGAAATACATCAAATT
rJMFF026G20+          TTTTGAAATTTTGACGAATCCTGCCAGGGTGGTTCCAGCACAAGAGAAATACATCAAATT
                      ____________________________________________________________
consensus             TTTTGAAATTTTGACGAATCCTGCCAGGGTGGTTCCAGCACAAGAGAAATACATCAAATT
 
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JMFS092A12-           TTTGGAGGATAGCAGATATGTGCCAATGAAGTCTTCCCCTTCAGGGTTTGTATTACTAAA
rJMFF026G20+          TTTGGAGGATAGCAGATATGTGCCAATGAAGTCTTCCCCTTCAGGGTTTGTATTACTAAA
                      ____________________________________________________________
consensus             TTTGGAGGATAGCAGATATGTGCCAATGAAGTCTTCCCCTTCAGGGTTTGTATTACTAAA
 
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JMFS092A12-           GGATCTTAGGCCTGAAGAACCTGAAGTCTTGTCACTTACTGATGCACCCTCGACAACATC
rJMFF026G20+          GGATCTTAGGCCTGAAGAACCTGAAGTCTTGTCACTTACTGATGCACCCTCGACAACATC
                      ____________________________________________________________
consensus             GGATCTTAGGCCTGAAGAACCTGAAGTCTTGTCACTTACTGATGCACCCTCGACAACATC
 
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JMFS092A12-           AAATGCTGCCGGTGGATCTGTAACTGCACAACAGGGCTCAGCCTCTGCCATGAACGTTGA
rJMFF026G20+          AAATGCTGCCGGTGGATCTGTAACTGCACAACAGGGCTCAGCCTCTGCCATGAACGTTGA
                      ____________________________________________________________
consensus             AAATGCTGCCGGTGGATCTGTAACTGCACAACAGGGCTCAGCCTCTGCCATGAACGTTGA
 
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JMFS092A12-           CGATGAGCCTCAGCCACCACCAGCCTTTGAATACACATCATGATCTTGCCATATCAAATC
rJMFF026G20+          CGATGAGCCTCAGCCACCACCAGCCTTTGAATACACATCATGATCTTGCCATATCAAATC
                      ____________________________________________________________
consensus             CGATGAGCCTCAGCCACCACCAGCCTTTGAATACACATCATGATCTTGCCATATCAAATC
 
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JMFS092A12-           TAGTGTTTATTCCTTGTGATAAATGGGAGCTTCGGCTTTAACACTGCACAAGTTTACAAG
rJMFF026G20+          TAGTGTTTATTCCTTGTGATAAATGGGAGCTTCGGCTTTAACACTGCACAAGTTTACAAG
                      ____________________________________________________________
consensus             TAGTGTTTATTCCTTGTGATAAATGGGAGCTTCGGCTTTAACACTGCACAAGTTTACAAG
 
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JMFS092A12-           TGCCAATTTCTTCTCACTTCATTT                                    
rJMFF026G20+          TGCCAATTTCTTCTCACTTCATTTGTAGGGCAATATCTGTCTGACTTTTGGCACTCTTTT
                      ____________________________________________________________
consensus             TGCCAATTTCTTCTCACTTCATTTGTAGGGCAATATCTGTCTGACTTTTGGCACTCTTTT
 
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rJMFF026G20+          TCCTGCCATTGTGCTTGTAGTTGTCATTGTGTGAATCACATTCTTGTATTTTGTAACTCC
                      ____________________________________________________________
consensus             TCCTGCCATTGTGCTTGTAGTTGTCATTGTGTGAATCACATTCTTGTATTTTGTAACTCC