Contig 005423:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025C12Sequence518006330 (7)ref|XP_006347339.1|2e-06PREDICTED: WEB family protein At3g02930, chloroplastic-like [Solanum tuberosum]263005423 (2)
JMFS098F09Sequence625005423 (2)ref|XP_006347593.1|3e-60PREDICTED: WEB family protein At5g16730, chloroplastic-like [Solanum tuberosum]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS098F09-                   GAACTTGAAGGCTGAGTGCGAGGAAAAAGAGATGAATTTGATGAACAGTGTC
                      ____________________________________________________________
consensus                     GAACTTGAAGGCTGAGTGCGAGGAAAAAGAGATGAATTTGATGAACAGTGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS098F09-           AAAAGAAGTGAGGGCGAGAATTCTTCAATGGAAAAAGAAATAAGCAGGCTGGAAATTTTG
                      ____________________________________________________________
consensus             AAAAGAAGTGAGGGCGAGAATTCTTCAATGGAAAAAGAAATAAGCAGGCTGGAAATTTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS098F09-           CTAAAAGAAGCACAAGAAGAAGCTTCTGTAGCCAAGGAAGAAGAAGCTAATTTAAAGAAT
                      ____________________________________________________________
consensus             CTAAAAGAAGCACAAGAAGAAGCTTCTGTAGCCAAGGAAGAAGAAGCTAATTTAAAGAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS098F09-           TCCCTAAAGAAAGTTGAATCTGAGGTGAATCATCTAAAGGAAGCTCTTGGGGAAACAAAG
                      ____________________________________________________________
consensus             TCCCTAAAGAAAGTTGAATCTGAGGTGAATCATCTAAAGGAAGCTCTTGGGGAAACAAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS098F09-           GCTGAGAGCATGAAACTGAAGGAGTCCTTAATGGACAAAGAGAACGAAATGCAAAACATT
                      ____________________________________________________________
consensus             GCTGAGAGCATGAAACTGAAGGAGTCCTTAATGGACAAAGAGAACGAAATGCAAAACATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS098F09-           CTGCAGGTGAACGAGGAACTTCGAAGTAGAGAGGCAGCCTCTTTGAAGAAAGCCGAGGAG
                      ____________________________________________________________
consensus             CTGCAGGTGAACGAGGAACTTCGAAGTAGAGAGGCAGCCTCTTTGAAGAAAGCCGAGGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS098F09-           TTGTCCAAGATGCTTGAGGAAGCTTTGGCCACCAATAAGCTAGCCGAAGAGAATGGAGAG
                      ____________________________________________________________
consensus             TTGTCCAAGATGCTTGAGGAAGCTTTGGCCACCAATAAGCTAGCCGAAGAGAATGGAGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS098F09-           GAGCTTACAGACAGTGAAAAGGATTATGATATGCTCCCAAAGGTGGTGGAGTTTTCCGAA
                      ____________________________________________________________
consensus             GAGCTTACAGACAGTGAAAAGGATTATGATATGCTCCCAAAGGTGGTGGAGTTTTCCGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS098F09-           CAAAATGGCGGAAGAGAAGAAAATCCTAAGATGGAGATCCCACATCAATCTCACCATTTT
                      ____________________________________________________________
consensus             CAAAATGGCGGAAGAGAAGAAAATCCTAAGATGGAGATCCCACATCAATCTCACCATTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS098F09-           GTTATAAAAGAGTTTCAAGAAGTGAATAACACTTGTACTAATGAAGACAAAGAAACTGAT
rJMFF025C12+                                                TAATGAAGACAAAGAAACTGAT
                      ____________________________________________________________
consensus             GTTATAAAAGAGTTTCAAGAAGTGAATAACACTTGTACTAATGAAGACAAAGAAACTGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS098F09-           AGAGCGGATGAAAAAGCTAAAGAAAAGGACG                             
rJMFF025C12+          AGAGCGGATGAAAAAGNTAAAGAAAAGGACGNCACTGACTCTGTAGAGGCAGATTTAAAA
                      ____________________________________________________________
consensus             AGAGCGGATGAAAAAGCTAAAGAAAAGGACGNCACTGACTCTGTAGAGGCAGATTTAAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF025C12+          ACATGGGAGAGCTGCAAGATAGAGGAGAAAGACTTCTCCCCAGAGGGAGAGGCAGAGCAT
                      ____________________________________________________________
consensus             ACATGGGAGAGCTGCAAGATAGAGGAGAAAGACTTCTCCCCAGAGGGAGAGGCAGAGCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF025C12+          GAAGAGGAGTTGGAGTCAAAGACAGAGGTAGGAGAGAAGCATGACCACCAAAATGGGCTA
                      ____________________________________________________________
consensus             GAAGAGGAGTTGGAGTCAAAGACAGAGGTAGGAGAGAAGCATGACCACCAAAATGGGCTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF025C12+          TCTCCAACGGAAAACCACAACACTTCTCCACCGAAACAGCAAAGCCAGAAGAAGAAGAAA
                      ____________________________________________________________
consensus             TCTCCAACGGAAAACCACAACACTTCTCCACCGAAACAGCAAAGCCAGAAGAAGAAGAAA