Contig 005409:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022A05Sequence532005146 (3)ref|XP_009631192.1|1e-40PREDICTED: Golgi to ER traffic protein 4 homolog isoform X8 [Nicotiana tomentos691005409 (2)emb|CDP19077.1|1e-82unnamed protein product [Coffea canephora]
JMSF029N14Sequence648005146 (3)ref|XP_009615186.1|9e-55PREDICTED: Golgi to ER traffic protein 4 homolog isoform X2 [Nicotiana tomentos752005409 (2)emb|CDP19077.1|2e-97unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF029N14+                      GAGCACATAAGTATGGATCTCCAGAGCTTCATGACATGTTGGCCGAAT
                      ____________________________________________________________
consensus                         GAGCACATAAGTATGGATCTCCAGAGCTTCATGACATGTTGGCCGAAT
 
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rJMSF029N14+          ATATATTCTCAGAGTCACCTGAGGTGGACATGGGTAAAGTATCTTTCCATTTTGTGAGAG
rJMFF022A05+                                       ATGGGTAAAGTATCTTTCCATTTTGTGAGAG
                      ____________________________________________________________
consensus             ATATATTCTCAGAGTCACCTGAGGTGGACATGGGTAAAGTATCTTTCCATTTTGTGAGAG
 
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rJMSF029N14+          GGAAGAATCCAAAGAAATTCACTTCAACTGTTATCAATTTCATGGGCAAGCGTTACCCTG
rJMFF022A05+          GGAAGAATCCAAAGAAATTCACTTCAACTGTTATCAATTTCATGGGCAAGTGTTACCCTG
                      ____________________________________________________________
consensus             GGAAGAATCCAAAGAAATTCACTTCAACTGTTATCAATTTCATGGGCAAGTGTTACCCTG
 
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rJMSF029N14+          GAGAAGAAGATTTGGCTATTGCTCGGGCAGTTTTAATGTATTTATCCCTGGGCAACCTAC
rJMFF022A05+          GAGAAGAAGATTTGGCTATTGCTCGGGCAGTTTTAATGTATTTATCCCTGGGCAACCTAC
                      ____________________________________________________________
consensus             GAGAAGAAGATTTGGCTATTGCTCGGGCAGTTTTAATGTATTTATCCCTGGGCAACCTAC
 
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rJMSF029N14+          GAGATGCCAACTATCTTATGGATGAGTTAAAAAAACAAGTCAGCTCTAAGGAGCTTGAAT
rJMFF022A05+          GAGATGCCAACTATCTTATGGATGAGTTAAAAAAACAAGTCAGCTCTAAGGAGCTTGAAT
                      ____________________________________________________________
consensus             GAGATGCCAACTATCTTATGGATGAGTTAAAAAAACAAGTCAGCTCTAAGGAGCTTGAAT
 
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rJMSF029N14+          TTCCTGAATCAGAATTAATGCAGTTCATCAGTTATCTTCTTCTGACGTTGCAGAGAGATG
rJMFF022A05+          TTCCTGAATCAGAATTAATGCAGTTCATCAGTTATCTTCTTCTGACGTTGCAGAGAGATG
                      ____________________________________________________________
consensus             TTCCTGAATCAGAATTAATGCAGTTCATCAGTTATCTTCTTCTGACGTTGCAGAGAGATG
 
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rJMSF029N14+          CAATCCCTCTGTTTAATAAGTTGAGGGTGGTCTACAAGCTCAGTATAGAAAGAGAACCAA
rJMFF022A05+          CAATCCCTCTGTTTAATAAGTTGAGGGTGGTCTACAAGCTCAGTATAGAAAGAGAACCAA
                      ____________________________________________________________
consensus             CAATCCCTCTGTTTAATAAGTTGAGGGTGGTCTACAAGCTCAGTATAGAAAGAGAACCAA
 
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rJMSF029N14+          CATTTTATGAGTTGTTAGATGAAATAGCGGAGAAGTTTTATGGATTACGACGCCAGAATC
rJMFF022A05+          CATTTTATGAGTTGTTAGATGAAATAGCGGAGAAGTTTTATGGATTACGACGCCAGAATC
                      ____________________________________________________________
consensus             CATTTTATGAGTTGTTAGATGAAATAGCGGAGAAGTTTTATGGATTACGACGCCAGAATC
 
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rJMSF029N14+          CACTGCAGGGGATGTTTGGAGATATCTTTAAGATGATGGGAGGTGAATAGGCGATATGAG
rJMFF022A05+          CACTGCAGGGGATGTTTGGAGATATCTTTAAGATGATGGGAGGTGAATAGGCGATATGAG
                      ____________________________________________________________
consensus             CACTGCAGGGGATGTTTGGAGATATCTTTAAGATGATGGGAGGTGAATAGGCGATATGAG
 
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rJMSF029N14+          TGTTTGAGTTGCGTTTGCTAATGAGCTACAACAGCAGTTGGTTCGATGAAATCATTTGCA
rJMFF022A05+          TGTTTGAGTTGCGTTTGCTAATGAGCTACAACAGCAGTTGGTTCGATGAAATCATTTGCA
                      ____________________________________________________________
consensus             TGTTTGAGTTGCGTTTGCTAATGAGCTACAACAGCAGTTGGTTCGATGAAATCATTTGCA
 
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rJMSF029N14+          GTGCAGTGCAGTGCAGTTGAGTTGAATATGTATATGCATCTAAATGGTGGGCCATTTATG
rJMFF022A05+          GTGCAGTGCAGTGCAGTTGAGTTGAATATGTATATGCATCTAAATGGTGGGCCATTTATG
                      ____________________________________________________________
consensus             GTGCAGTGCAGTGCAGTTGAGTTGAATATGTATATGCATCTAAATGGTGGGCCATTTATG
 
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rJMSF029N14+          TATTGACAGTTTTGTTGTTTCACTTGGCTGGCTTATTATAATTCTATATTCTTTTTCTGT
rJMFF022A05+          TATTGACAGTTTTGTTGTTTCACTTGGCTGGCTTATTATAATTCTATATTCTTTTTCTGT
                      ____________________________________________________________
consensus             TATTGACAGTTTTGTTGTTTCACTTGGCTGGCTTATTATAATTCTATATTCTTTTTCTGT
 
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rJMSF029N14+          GGTTTCTATAATGCAAACATGCAATGCACTTTCTAAATTCT                   
rJMFF022A05+          GGTTTCTATAATGCAAACATGCAATGCACTTTCTAAATTCTTGCTTAACTAAAATAAAAT
                      ____________________________________________________________
consensus             GGTTTCTATAATGCAAACATGCAATGCACTTTCTAAATTCTTGCTTAACTAAAATAAAAT