Contig 005402:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014A23Sequence553003119 (8)ref|XP_002313768.2|4e-41hypothetical protein POPTR_0009s12520g [Populus trichocarpa] gb|EEE87723.2| hypo795005402 (9)ref|XP_006362719.1|2e-88PREDICTED: uncharacterized protein LOC102595504 isoform X2 [Solanum tuberosum]
JMFF019P03Sequence566003119 (8)ref|XP_009618616.1|6e-46PREDICTED: uncharacterized protein LOC104110774 isoform X1 [Nicotiana tomentosi713005402 (9)ref|XP_006362719.1|3e-51PREDICTED: uncharacterized protein LOC102595504 isoform X2 [Solanum tuberosum]
JMFF021N11Sequence549003119 (8)ref|XP_002313768.2|2e-41hypothetical protein POPTR_0009s12520g [Populus trichocarpa] gb|EEE87723.2| hypo750005402 (9)ref|XP_006362719.1|7e-87PREDICTED: uncharacterized protein LOC102595504 isoform X2 [Solanum tuberosum]
JMFF029M10Sequence588003119 (8)ref|XP_002313768.2|2e-47hypothetical protein POPTR_0009s12520g [Populus trichocarpa] gb|EEE87723.2| hypo687005402 (9)ref|XP_006362719.1|3e-51PREDICTED: uncharacterized protein LOC102595504 isoform X2 [Solanum tuberosum]
JMFF040A24Sequence609003119 (8)ref|XP_002313768.2|1e-51hypothetical protein POPTR_0009s12520g [Populus trichocarpa] gb|EEE87723.2| hypo688005402 (9)ref|XP_006362719.1|3e-51PREDICTED: uncharacterized protein LOC102595504 isoform X2 [Solanum tuberosum]
JMFF043K19Sequence620003119 (8)ref|XP_009618616.1|9e-52PREDICTED: uncharacterized protein LOC104110774 isoform X1 [Nicotiana tomentosi618005402 (9)ref|XP_006362719.1|8e-35PREDICTED: uncharacterized protein LOC102595504 isoform X2 [Solanum tuberosum]
JMFN035A14Sequence545005402 (9)ref|XP_006362719.1|2e-22PREDICTED: uncharacterized protein LOC102595504 isoform X2 [Solanum tuberosum]
JMFN035C14Sequence545005402 (9)ref|XP_006362719.1|2e-22PREDICTED: uncharacterized protein LOC102595504 isoform X2 [Solanum tuberosum]
JMSF052G12Sequence702003119 (8)ref|XP_009618616.1|7e-65PREDICTED: uncharacterized protein LOC104110774 isoform X1 [Nicotiana tomentosi935005402 (9)ref|XP_006362719.1|8e-107PREDICTED: uncharacterized protein LOC102595504 isoform X2 [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF052G12+ AGGAGGACNTGAGAA
                      ____________________________________________________________
consensus AGGAGGACNTGAGAA
 
. : . : . : . : . : . :
rJMFF014A23+ AGCGTAGCGG
rJMSF052G12+ GACTTTATGGGTTCCCGCAAGATTGTGTTGTGTGCACTGGGACTACGGATAGCGTAGCGG
                      ____________________________________________________________
consensus GACTTTATGGGTTCCCGCAAGATTGTGTTGTGTGCACTGGGACTACGGATAGCGTAGCGG
 
. : . : . : . : . : . :
rJMFF021N11+ AAAGCGGTTACATCTTTGGGTTCAACT
rJMFF014A23+ CAGTCATAGCAACACGTGCTTCCCCANCCTGGAAAAGCGGTTACATCTTTGGGTTCAACT
rJMSF052G12+ CAGTCATAGCAACACGTGCTT-CCCAACCTGGAAAAGCGGTTACATCTTTGGGTTCAACT
                      ____________________________________________________________
consensus CAGTCATAGCAACACGTGCTTCCCCAACCTGGAAAAGCGGTTACATCTTTGGGTTCAACT
 
. : . : . : . : . : . :
rJMFF021N11+ GTAGCTTTAAAACTACTAAGTACTAAAAAGGTGGAAGATGTTCGGTTTGGAGTGTATAGC
rJMFF014A23+ GTAGCTTTAAAACTACTAAGTACTAAAAAGGTGGAAGATGTTCGGTTTGGAGTGTATAGC
rJMSF052G12+ GTAGCTTTAAAACTACTAAGTACTAAAAAGGTGGAAGATGTTCGGTTTGGAGTGTATAGC
                      ____________________________________________________________
consensus GTAGCTTTAAAACTACTAAGTACTAAAAAGGTGGAAGATGTTCGGTTTGGAGTGTATAGC
 
. : . : . : . : . : . :
rJMFF021N11+ CACCGGCTCGGTGATAAATGGCTCGTCGGAGGGGCTTCCAACACCGGCGGAGCTGTTCTA
rJMFF014A23+ CACCGGCTCGGTGATAAATGGCTCGTCGGAGGGGCTTCCAACACCGGCGGAGCTGTTCTA
rJMSF052G12+ CACCGGCTCGGTGATAAATGGCTCGTCGGAGGGGCTTCCAACACCGGCGGAGCTGTTCTA
                      ____________________________________________________________
consensus CACCGGCTCGGTGATAAATGGCTCGTCGGAGGGGCTTCCAACACCGGCGGAGCTGTTCTA
 
. : . : . : . : . : . :
rJMFF021N11+ CGGCATCTCTTCAGTGACGAGGAGCTTTATAAATTGAGTGAGCGGATCAATCCCCTTGTG
rJMFF014A23+ CGGCATCTCTTCAGTGACGAGGAGCTTTATAAATTGAGTGAGCGGATCAATCCCCTTGTG
rJMSF052G12+ CGGCATCTCTTCAGTGACGAGGAGCTTTATAAATTGAGTGAGCGGATCAATCCCCTTGTG
rJMFF040A24+ TTCAGTGACGAGGAGCTTTATAAATTGAGTGAGCGGATCAATCCCCTTGTG
rJMFF029M10+ TTCAGTGACGAGGAGCTTTATAAATTGAGTGAGCGGATCAATCCCCTTGTG
rJMFF019P03+ TCTTCAGTGACGAGGAGCTTTATAAATTGAGTGAGCGGATCAATCCCCTTGTG
                      ____________________________________________________________
consensus CGGCATCTCTTCAGTGACGAGGAGCTTTATAAATTGAGTGAGCGGATCAATCCCCTTGTG
 
. : . : . : . : . : . :
rJMFF021N11+ CCCTCCCCTCTTGATTACTATCCCTTGAAAGTACCCGGTGAAAGATTCCCCTTGGCAGAT
rJMFF014A23+ CCCTCCCCTCTTGATTACTATCCCTTGAAAGTACCCGGTGAAAGATTCCCCTTGGCAGAT
rJMSF052G12+ CCCTCCCCTCTTGATTACTATCCCTTGAAAGTACCCGGTGAAAGATTCCCCTTGGCAGAT
rJMFF040A24+ CCCTCCCCTCTTGATTACTATCCCTTGAAAGTACCCGGTGAAAGATTCCCCTTGGCAGAT
rJMFF029M10+ CCCTCCCCTCTTGATTACTATCCCTTGAAAGTACCCGGTGAAAGATTCCCCTTGGCAGAT
rJMFF043K19+ AAGATTCCCCTTGGCAGAT
rJMFF019P03+ CCCTCCCCTCTTGATTACTATCCCTTGAAAGTACCCGGTGAAAGATTCCCCTTGGCAGAT
                      ____________________________________________________________
consensus CCCTCCCCTCTTGATTACTATCCCTTGAAAGTACCCGGTGAAAGATTCCCCTTGGCAGAT
 
. : . : . : . : . : . :
rJMFF021N11+ CCAACAAAAGAGCCTAGGATGCACCCGCGGCCGGAAGATGACGTGGAATACTTGTATGGT
rJMFF014A23+ CCAACAAAAGAGCCTAGGATGCACCCGCGGCCGGAAGATGACGTGGAATACTTGTATGGT
rJMSF052G12+ CCAACAAAAGAGCCTAGGATGCACCCGCGGCCGGAAGATGACGTGGAATACTTGTATGGT
rJMFF040A24+ CCAACAAAAGAGCCTAGGATGCACCCGCGGCCGGAAGATGACGTGGAATACTTGTATGGT
rJMFF029M10+ CCAACAAAAGAGCCTAGGATGCACCCGCGGCCGGAAGATGACGTGGAATACTTGTATGGT
rJMFF043K19+ CCAACAAAAGAGCCTAGGATGCACCCGCGGCCGGAAGATGACGTGGAATACTTGTATGGT
JMFN035C14- GAATACTTGTATGGT
JMFN035A14- GAATACTTGTATGGT
rJMFF019P03+ CCAACAAAAGAGCCTAGGATGCACCCGCGGCCGGAAGATGACGTGGAATACTTGTATGGT
                      ____________________________________________________________
consensus CCAACAAAAGAGCCTAGGATGCACCCGCGGCCGGAAGATGACGTGGAATACTTGTATGGT
 
. : . : . : . : . : . :
rJMFF021N11+ ATTCTTGAATCGATGGCTCGTATTGAGGCAAAGGGGTACAGTTTGCTAAAGAGTCTTGGG
rJMFF014A23+ ATTCTTGAATCGATGGCTCGTATTGAGGCAAAGGGGTACAGTTTGCTAAAGAGTCTTGGG
rJMSF052G12+ ATTCTTGAATCGATGGCTCGTATTGAGGCAAAGGGGTACAGTTTGCTAAAGAGTCTTGGG
rJMFF040A24+ ATTCTTGAATCGATGGCTCGTATTGAGGCAAAGGGGTACAGTTTGCTAAAGAGTCTTGGG
rJMFF029M10+ ATTCTTGAATCGATGGCTCGTATTGAGGCAAAGGGGTACAGTTTGCTAAAGAGTCTTGGG
rJMFF043K19+ ATTCTGNAATCGATGGCTCGTATTGAGGCAAAGGGGTACAGTTTGCTAAAGAGTCTTGGG
JMFN035C14- ATTCTTGAATCGATGGCTCGTATTGAGGCAAAGGGGTACAGTTTGCTAAAGAGTCTTGGG
JMFN035A14- ATTCTTGAATCGATGGCTCGTATTGAGGCAAAGGGGTACAGTTTGCTAAAGAGTCTTGGG
rJMFF019P03+ ATTCTTGAATCGATGGCTCGTATTGAGGCAAAGGGGTACAGTTTGCTAAAGAGTCTTGGG
                      ____________________________________________________________
consensus ATTCTTGAATCGATGGCTCGTATTGAGGCAAAGGGGTACAGTTTGCTAAAGAGTCTTGGG
 
. : . : . : . : . : . :
rJMFF021N11+ GCAGCCCCGGTTGAGGAAATACTGACATCTGGAGGCGGGTCAAGGAATGAAATATGGACA
rJMFF014A23+ GCAGCCCCGGTTGAGGAAATACTGACATCTGGAGGCGGGTCAAGGAATGAAATATGGACA
rJMSF052G12+ GCAGCCCCGGTTGAGGAAATACTGACATCTGGAGGCGGGTCAAGGAATGAAATATGGACA
rJMFF040A24+ GCAGCCCCGGTTGAGGAAATACTGACATCTGGAGGCGGGTCAAGGAATGAAATATGGACA
rJMFF029M10+ GCAGCCCCGGTTGAGGAAATACTGACATCTGGAGGCGGGTCAAGGAATGAAATATGGACA
rJMFF043K19+ GCAGCCCCGGTTGAGGAAATACTGACATCTGGAGGCGGGTCAAGGAATGAAATATGGACA
JMFN035C14- GCAGCCCCGGTTGAGGAAATACTGACATCTGGAGGCGGGTCAAGGAATGAAATATGGACA
JMFN035A14- GCAGCCCCGGTTGAGGAAATACTGACATCTGGAGGCGGGTCAAGGAATGAAATATGGACA
rJMFF019P03+ GCAGCCCCGGTTGAGGAAATACTGACATCTGGAGGCGGGTCAAGGAATGAAATATGGACA
                      ____________________________________________________________
consensus GCAGCCCCGGTTGAGGAAATACTGACATCTGGAGGCGGGTCAAGGAATGAAATATGGACA
 
. : . : . : . : . : . :
rJMFF021N11+ AAGATCCGAGCGAGGGTCCTGGGTATACCGGTACGCTGCGCAGATCAAACTGAAGCTGCC
rJMFF014A23+ AAGATCCGAGCGAGGGTCCTGGGTATACCGGTACGCTGCGCAGATCAAACTGAAGCTGCC
rJMSF052G12+ AAGATCCGAGCGAGGGTCCTGGGTATACCGGTACGCTGCGCAGATCAAACTGAAGCTGCC
rJMFF040A24+ AAGATCCGAGCGAGGGTCCTGGGTATACCGGTACGCTGCGCAGATCAAACTGAAGCTGCC
rJMFF029M10+ AAGATCCGAGCGAGGGTCCTGGGTATACCGGTACGCTGCGCAGATCAAACTGAAGCTGCC
rJMFF043K19+ AAGATCCGAGCGAGGGTCCTGGGTATACCGGTACGCTGCGCAGATCAAACTGAAGCTGCC
JMFN035C14- AAGATCCGAGCGAGGGTCCTGGGTATACCGGTACGCTGCGCAGATCAAACTGAAGCTGCC
JMFN035A14- AAGATCCGAGCGAGGGTCCTGGGTATACCGGTACGCTGCGCAGATCAAACTGAAGCTGCC
rJMFF019P03+ AAGATCCGAGCGAGGGTCCTGGGTATACCGGTACGCTGCGCAGATCAAACTGAAGCTGCC
                      ____________________________________________________________
consensus AAGATCCGAGCGAGGGTCCTGGGTATACCGGTACGCTGCGCAGATCAAACTGAAGCTGCC
 
. : . : . : . : . : . :
rJMFF021N11+ TATGGAGCCGCATTGCTAGCACTAAAAGGTGCCTGTCAAAACAAGGTTCTTCTAACTCCG
rJMFF014A23+ TATGGAGCCGCATTGCTAGCACTAAAAGGTGCCTGTCAAAACAAGGTTCTTCTAACTCCG
rJMSF052G12+ TATGGAGCCGCATTGCTAGCACTAAAAGGTGCCTGTCAAAACAAGGTTCTTCTAACTCCG
rJMFF040A24+ TATGGAGCCGCATTGCTAGCACTAAAAGGTGCCTGTCAAAACAAGGTTCTTCTAACTCCG
rJMFF029M10+ TATGGAGCCGCATTGCTAGCACTAAAAGGTGCCTGTCAAAACAAGGTTCTTCTAACTCCG
rJMFF043K19+ TATGGAGCCGCATTGCTAGCACTAAAAGGTGCCTGTCAAAACAAGGTTCTTCTAACTCCG
JMFN035C14- TATGGAGCCGCATTGCTAGCACTAAAAGGTGCCTGTCAAAACAAGGTTCTTCTAACTCCG
JMFN035A14- TATGGAGCCGCATTGCTAGCACTAAAAGGTGCCTGTCAAAACAAGGTTCTTCTAACTCCG
rJMFF019P03+ TATGGAGCCGCATTGCTAGCACTAAAAGGTGCCTGTCAAAACAAGGTTCTTCTAACTCCG
                      ____________________________________________________________
consensus TATGGAGCCGCATTGCTAGCACTAAAAGGTGCCTGTCAAAACAAGGTTCTTCTAACTCCG
 
. : . : . : . : . : . :
rJMFF021N11+ TATTAATAAGGCTATGTCTTATAATTCTAGGCAATCAAGTTGTGTTCAAAACTGCAAAAA
rJMFF014A23+ TATTAATAAGGCTATGTCTTATAATTCTAGGCAATCAAGTTGTGTTCAAAACTGCAAAAA
rJMSF052G12+ TATTAATAAGGCTATGTCTTATAATTCTAGGCAATCAAGTTGTGTTCAAAACTGCAAAAA
rJMFF040A24+ TATTAATAAGGCTATGTCTTATAATTCTAGGCAATCAAGTTGTGTTCAAAACTGCAAAAA
rJMFF029M10+ TATTAATAAGGCTATGTCTTATAATTCTAGGCAATCAAGTTGTGTTCAAAACTGCAAAAA
rJMFF043K19+ TATTAATAAGGCTATGTCTTATAATTCTAGGCAATCAAGTTGTGTTCAAAACTGCAAAAA
JMFN035C14- TATTAATAAGGCTATGTCTTATAATTCTAGGCAATCAAGTTGTGTTCAAAACTGCAAAAA
JMFN035A14- TATTAATAAGGCTATGTCTTATAATTCTAGGCAATCAAGTTGTGTTCAAAACTGCAAAAA
rJMFF019P03+ TATTAATAAGGCTATGTCTTATAATTCTAGGCAATCAAGTTGTGTTCAAAACTGCAAAAA
                      ____________________________________________________________
consensus TATTAATAAGGCTATGTCTTATAATTCTAGGCAATCAAGTTGTGTTCAAAACTGCAAAAA
 
. : . : . : . : . : . :
rJMFF021N11+ TAAAAGGAAAAAAACGTGTGATGTTTACGCTTGTTTGCAATTTGCCAAGTTGTGATGCCG
rJMFF014A23+ TAAAAGGAAAAAAACGTGTGATGTTTACGCTTGTTTGCAATTTGCCAAGTTGTGATGCCG
rJMSF052G12+ TAAAAGGAAAAAAACGTGTGATGTTTACGCTTGTTTGCAATTTGCCAAGTTGTGATGCCG
rJMFF040A24+ TAAAAGGAAAAAAACGTGTGATGTTTACGCTTGTTTGCAATTTGCCAAGTTGTGATGCCG
rJMFF029M10+ TAAAAGGAAAAAAACGTGTGATGTTTACGCTTGTTTGCAATTTGCCAAGTTGTGATGCCG
rJMFF043K19+ TAAAAGGAAAAAAACGTGTGATGTTTACGCTTGTTTGCAATTTGCCAAGTTGTGATGCCG
JMFN035C14- TAAAAGGAAAAAAACGTGTGATGTTTACGCTTGTTTGCAATTTGCCAAGTTGTGATGCCG
JMFN035A14- TAAAAGGAAAAAAACGTGTGATGTTTACGCTTGTTTGCAATTTGCCAAGTTGTGATGCCG
rJMFF019P03+ TAAAAGGAAAAAAACGTGTGATGTTTACGCTTGTTTGCAATTTGCCAAGTTGTGATGCCG
                      ____________________________________________________________
consensus TAAAAGGAAAAAAACGTGTGATGTTTACGCTTGTTTGCAATTTGCCAAGTTGTGATGCCG
 
. : . : . : . : . : . :
rJMFF021N11+ ACGTACAAGTATCTTGGGGTAGTGGCACAAAGCCTCTTTTGTGTTGAGCATATAATATAT
rJMFF014A23+ ACGTACAAGTATCTTGGGGTAGTGGCACAAAGCCTCTTTTGTGTTGAGCATATAATATAT
rJMSF052G12+ ACGTACAAGTATCTTGGGGTAGTGGCACAAAGCCTCTTTTGTGTTGAGCATATAATATAT
rJMFF040A24+ ACGTACAAGTATCTTGGGGTAGTGGCACAAAGCCTCTTTTGTGTTGAGCATATAATATAT
rJMFF029M10+ ACGTACAAGTATCTTGGGGTAGTGGCACAAAGC--CTTTTGTGTTGAGCATATAATATAT
rJMFF043K19+ ACGTACAAGTATCTTGGGGTAGTGGCACAAAGCCTCTTTTGTGTTGAGCATATAATATAT
JMFN035C14- ACGTACAAGTATCTTGGGGTAGTGGCACAAAGCCTCTTTTGTGTTGAGCATATAATATAT
JMFN035A14- ACGTACAAGTATCTTGGGGTAGTGGCACAAAGCCTCTTTTGTGTTGAGCATATAATATAT
rJMFF019P03+ ACGTACAAGTATCTTGGGGTAGTGGCACAAAGCCTCTTTTGTGTTGAGCATATAATATAT
                      ____________________________________________________________
consensus ACGTACAAGTATCTTGGGGTAGTGGCACAAAGCCTCTTTTGTGTTGAGCATATAATATAT
 
. : . : . : . : . : . :
rJMFF021N11+ AAA
rJMFF014A23+ AAAAT
rJMSF052G12+ AAAATTAATATGCAGTTCAACTATTAGTTCAGAATTTTAGTTAAAATGGATCACATGTTT
rJMFF040A24+ AAAATTAATATGCAGTTCAACTATTAGTTCAGAATTTTAGTTAAAATGGATCACATGTTT
rJMFF029M10+ AAAATTAATATGCAGTTCAACTATTAGTTCAGAATTTTAGTTAAAATGGATCACATGTTT
rJMFF043K19+ AAAATTAATATGCAGTTCAACTATTAGTTCAGAATTTTAGTTAAAATGGATCACATGTTT
JMFN035C14- AAAATTAATATGCAGTTCAACTATTAGTTCAGAATTTTAGTTAAAATGGATCACATGTTT
JMFN035A14- AAAATTAATATGCAGTTCAACTATTAGTTCAGAATTTTAGTTAAAATGGATCACATGTTT
rJMFF019P03+ AAAATTAATATGCAGTTCAACTATTAGTTCAGAATTTTAGTTAAAATGGATCACATGTTT
                      ____________________________________________________________
consensus AAAATTAATATGCAGTTCAACTATTAGTTCAGAATTTTAGTTAAAATGGATCACATGTTT
 
. : . : . : . : . : . :
rJMSF052G12+ TAATTTGTATTAGAGTCAATT
rJMFF040A24+ TAATTTGTATTAGAGTCAATTTCATGTGAAATTTCAA
rJMFF029M10+ TAATTTGTATTAGAGTCAATTTCATGTGAAATTTCAAT
rJMFF043K19+ TAATTTGTATTAGAGTCAATTTCATGTGAAATTTCAATGTAATTGCC
JMFN035C14- TAATTTGTATTAGAGTCAATTTCATGTGAAATTTCAATGTAATTGCC
JMFN035A14- TAATTTGTATTAGAGTCAATTTCATGTGAAATTTCAATGTAATTGCC
rJMFF019P03+ TAATTTGTATTAGAGTCAATTTCATGTGAAATTTCAATGTAATTGCCCTTGTGTGGGAGT
                      ____________________________________________________________
consensus TAATTTGTATTAGAGTCAATTTCATGTGAAATTTCAATGTAATTGCCCTTGTGTGGGAGT