Contig 005399:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018L16Sequence594008081 (3)ref|XP_009779551.1|1e-88PREDICTED: indole-3-acetic acid-amido synthetase GH3.6-like [Nicotiana sylvestr799005399 (3)ref|XP_010240996.1|2e-116PREDICTED: indole-3-acetic acid-amido synthetase GH3.6 [Nelumbo nucifera]
JMFN032P09Sequence639005399 (3)gb|KHG06705.1|5e-105Indole-3-acetic acid-amido synthetase GH3.6 -like protein [Gossypium arboreum]
JMSF049I01Sequence695008081 (3)ref|XP_009779551.1|3e-99PREDICTED: indole-3-acetic acid-amido synthetase GH3.6-like [Nicotiana sylvestr713005399 (3)ref|XP_010240996.1|2e-106PREDICTED: indole-3-acetic acid-amido synthetase GH3.6 [Nelumbo nucifera]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN032P09- CACGAGGTAATGCTGTTGTGACAGGTGCCA
                      ____________________________________________________________
consensus CACGAGGTAATGCTGTTGTGACAGGTGCCA
 
. : . : . : . : . : . :
JMFN032P09- TGTCTCAGTATATCCCTACTCTCAATTATTTTGGCAATGATCTTCCCCTCGTCAGTACCT
                      ____________________________________________________________
consensus TGTCTCAGTATATCCCTACTCTCAATTATTTTGGCAATGATCTTCCCCTCGTCAGTACCT
 
. : . : . : . : . : . :
JMFN032P09- CGTATGCATCTTCCGAGGGTTATTTCGGTGTAAACCTTAATCCTCTTTGCAAGCCCACCG
                      ____________________________________________________________
consensus CGTATGCATCTTCCGAGGGTTATTTCGGTGTAAACCTTAATCCTCTTTGCAAGCCCACCG
 
. : . : . : . : . : . :
JMFN032P09- AGATTGCTTATACCATCATTCCTACCATGGCGTATTTCGAGTTCTTGCCTGTTTCTCGAG
                      ____________________________________________________________
consensus AGATTGCTTATACCATCATTCCTACCATGGCGTATTTCGAGTTCTTGCCTGTTTCTCGAG
 
. : . : . : . : . : . :
JMFN032P09- AAATCGGAGTGCCCGAACCCAGACCGGTTGAAGTTGTGGATCTTGTAGATGTTAAACTCG
rJMFF018L16+ CTTGTAGATGTTAAACTCG
                      ____________________________________________________________
consensus AAATCGGAGTGCCCGAACCCAGACCGGTTGAAGTTGTGGATCTTGTAGATGTTAAACTCG
 
. : . : . : . : . : . :
JMFN032P09- GGCAAGAATATGAGATGGTCGTCACCACTTACGCAGGGTTGTATCGTTATCGTGTTGGCG
rJMSF049I01+ CCACTTACGCAGGGTTGTATCGTTATCGTGTTGGTG
rJMFF018L16+ GNCAAGAATATGAGGTCGTCGTCACCACTTACGCAGGGTTGTATCGTTATCGTGTTGGTG
                      ____________________________________________________________
consensus GGCAAGAATATGAGGTGGTCGTCACCACTTACGCAGGGTTGTATCGTTATCGTGTTGGTG
 
. : . : . : . : . : . :
JMFN032P09- ACATTCTTCGGGTTGCCGGATTCAAGAACAACACGCCGCAATTTAACTTCGTATGTCGGA
rJMSF049I01+ ACATTCTTCGGGTTGCGGGATTCAAGAACAACACGCCGCAATTTAACTTCGTATGTCGGA
rJMFF018L16+ ACATTCTTCGGGTTGCGGGATTCAAGAACAACACGCCGCAATTTAACTTCGTATGTCGGA
                      ____________________________________________________________
consensus ACATTCTTCGGGTTGCGGGATTCAAGAACAACACGCCGCAATTTAACTTCGTATGTCGGA
 
. : . : . : . : . : . :
JMFN032P09- AGAACGTGGCGCTGAGCATAGATTTCGACAAAACGGACGAGGTAGAGCTGCATAACGCCG
rJMSF049I01+ AGAACGTGGCGCTCAGCATAGATGCCGACAAAACGGACGAGGTAGAGCTGCATAACGCCG
rJMFF018L16+ AGAACGTGGCGCTCAGCATAGATGCCGACAAAACGGACGAGGTAGAGCTGCATAACGCCG
                      ____________________________________________________________
consensus AGAACGTGGCGCTCAGCATAGATGCCGACAAAACGGACGAGGTAGAGCTGCATAACGCCG
 
. : . : . : . : . : . :
JMFN032P09- TCAAGAATGCGTCCAACATTCTTCTGCCGTTTGATGCGTCCTTAATGGAGTACACCAGCC
rJMSF049I01+ TCAAGAATGCGTCCAACATTCTTCTGCCGTTTGATGCGTCCTTAATAGAGTACACCAGCC
rJMFF018L16+ TCAAGAATGCGTCCAACATTCTTCTGCCGTTTGATGCGTCCTTAATAGAGTACACCAGCC
                      ____________________________________________________________
consensus TCAAGAATGCGTCCAACATTCTTCTGCCGTTTGATGCGTCCTTAATAGAGTACACCAGCC
 
. : . : . : . : . : . :
JMFN032P09- ATGCAAACACGTCAACCATCCCCGGACACTACGTCCTCTACTGGGAAATCACCCAGTCGT
rJMSF049I01+ ATGCAAACACGTCCACCATCCCCGGACACTACGTCCTCTACTGGGAAATCACCCAGTCGT
rJMFF018L16+ ATGCAAACACGTCCACCATCCCCGGACACTACGTCCTCTACTGGGAAATCACCCAGTCGT
                      ____________________________________________________________
consensus ATGCAAACACGTCCACCATCCCCGGACACTACGTCCTCTACTGGGAAATCACCCAGTCGT
 
. : . : . : . : . : . :
JMFN032P09- CGGAAAACCCAATTCCTCCCTACATTTTCGAACGCTGCTGCATCGCCGTCGAAGAATCAC
rJMSF049I01+ CGGAAAACCCAATTCCTCCCTCCATTTTCGAGGACTGCTGCCTCGCCGTCGAAGAATCAC
rJMFF018L16+ CGGAAAACCCAATTCCTCCCTCCATTTTCGAGGACTGCTGCCTCGCCGTCGAAGAATCAC
                      ____________________________________________________________
consensus CGGAAAACCCAATTCCTCCCTCCATTTTCGAGGACTGCTGCCTCGCCGTCGAAGAATCAC
 
. : . : . : . : . : . :
JMFN032P09- TCAACA
rJMSF049I01+ TCAACAGCGTTTACCGGGAGTGCCGCGTCTCCGACAAGTCCATCGGGCCGCTGGAAATCA
rJMFF018L16+ TCAACAGCGTTTACCGGGAGTGCCGCGTCTCCGACAAGTCCATCGGGCCGCTGGAAATCA
                      ____________________________________________________________
consensus TCAACAGCGTTTACCGGGAGTGCCGCGTCTCCGACAAGTCCATCGGGCCGCTGGAAATCA
 
. : . : . : . : . : . :
rJMSF049I01+ GGATAGTGGAGAACGGCACGTTCGATAAGATGATGGACTACGCCATCGCTAACGGTGGCT
rJMFF018L16+ GGATAGTGGAGAACGGCACGTTCGATAAGATGATGGACTACGCCATCGCTAACGGTGGCT
                      ____________________________________________________________
consensus GGATAGTGGAGAACGGCACGTTCGATAAGATGATGGACTACGCCATCGCTAACGGTGGCT
 
. : . : . : . : . : . :
rJMSF049I01+ CGTCAATTAATCAGTACAAAGCGCCGCGCTGTGTGACGCACGCTCCGATCGTGGAGCTTC
rJMFF018L16+ CGTCAATTAATCAGTACAAAGCGCCGCGCTGTGTGACGCACGCTCCGATCGTGGAGCTTC
                      ____________________________________________________________
consensus CGTCAATTAATCAGTACAAAGCGCCGCGCTGTGTGACGCACGCTCCGATCGTGGAGCTTC
 
. : . : . : . : . : . :
rJMSF049I01+ TCGACTCGCGAGTTATGTCAAATTATTTCAGTCCTAAACCTCCCGAATGGGCTCCGGGTC
rJMFF018L16+ TCGACTCGCGAGTTATGTCAAATTATTTCAGTCCTAAACCTCCCGAATGGGCTCCGGGTC
                      ____________________________________________________________
consensus TCGACTCGCGAGTTATGTCAAATTATTTCAGTCCTAAACCTCCCGAATGGGCTCCGGGTC
 
. : . : . : . : . : . :
rJMSF049I01+ ACAAGCATTGGAACACCAACTAAAATCAAAATGGCCTGGAGACTTTACGGACCATATATT
rJMFF018L16+ ACAAGCATTGGAACACCAACTAAAATCAAAATGGCCTGGAGACTTTACGGACCATATATT
                      ____________________________________________________________
consensus ACAAGCATTGGAACACCAACTAAAATCAAAATGGCCTGGAGACTTTACGGACCATATATT
 
. : . : . : . : . : . :
rJMSF049I01+ AATGTTGTGACTTAGCATGGATAATGTTTTGTCTTCTACAATTTGTGTTTCTGCATCCTA
rJMFF018L16+ AATGTTGTGACTTAGCATGGATAATGTTTTGTCTTCTACAATTTGTGTTTCTGCATCCTA
                      ____________________________________________________________
consensus AATGTTGTGACTTAGCATGGATAATGTTTTGTCTTCTACAATTTGTGTTTCTGCATCCTA
 
. : . : . : . : . : . :
rJMSF049I01+ GCTATTATTCTAGCTCT
rJMFF018L16+ GCTATTATTCTAGCTCTTGTATCATTGCATGTCCTTATCCAAGAATAATTAACCAATAAT
                      ____________________________________________________________
consensus GCTATTATTCTAGCTCTTGTATCATTGCATGTCCTTATCCAAGAATAATTAACCAATAAT