Contig 005392:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017M17Sequence564010921 (5)emb|CDP09371.1|5e-103unnamed protein product [Coffea canephora]783005392 (2)ref|XP_006354632.1|8e-65PREDICTED: dynamin-related protein 1E-like [Solanum tuberosum]
JMSF049P19Sequence431010921 (5)emb|CDP09371.1|5e-15unnamed protein product [Coffea canephora]733005392 (2)ref|XP_011093474.1|1e-95PREDICTED: dynamin-related protein 1E-like [Sesamum indicum]

Alignment

This contig is upended


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rJMFF017M17+                                                                   AGC
                      ____________________________________________________________
consensus                                                                      AGC
 
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rJMSF049P19+                                        TCTGAAGGAACTTGTGAGGAAGTCAATTGG
rJMFF017M17+          TGAAGCTTCTGTTGATGCTGTTCACTTTGTTCTGAAGGAACTTGTGAGGAAGTCAATTGG
                      ____________________________________________________________
consensus             TGAAGCTTCTGTTGATGCTGTTCACTTTGTTCTGAAGGAACTTGTGAGGAAGTCAATTGG
 
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rJMSF049P19+          AGAATGCCAGGAGTTAAAGC-GGTTTCCCAGTCTACAAACTGCAATAGCTGCAGCTTCTA
rJMFF017M17+          AGAATGCCAGGAGTTAAAGCGGGTTTCCCAGTCTACAAACTGCAATAGCTGCAGCTTCTA
                      ____________________________________________________________
consensus             AGAATGCCAGGAGTTAAAGCGGGTTTCCCAGTCTACAAACTGCAATAGCTGCAGCTTCTA
 
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rJMSF049P19+          ATGAATCCTTGGAAAAATTTCGTGAC-GGAAGTAAGAAGACGGTCACTAGACTCGTGGAC
rJMFF017M17+          ATGAATCCTTGGAAAAATTTCGTGACGGGAAGTAAGAAGACGGTCACTAGACTCGTGGAC
                      ____________________________________________________________
consensus             ATGAATCCTTGGAAAAATTTCGTGACGGGAAGTAAGAAGACGGTCACTAGACTCGTGGAC
 
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rJMSF049P19+          ATGGAGGCTTCATACCTGACAGTGGATTACTTTAGGAAGCTTCCACAGGAGGTGGAGAAA
rJMFF017M17+          ATGGAGGCTTCATACCTGACAGTGGATTACTTTAGGAAGCTTCCACAGGAGGTGGAGAAA
                      ____________________________________________________________
consensus             ATGGAGGCTTCATACCTGACAGTGGATTACTTTAGGAAGCTTCCACAGGAGGTGGAGAAA
 
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rJMSF049P19+          GGCGGAAACCAAGCAGCTGGTGCTGGTGGTGCTGCTGCTGCAGACCGCCATGC-GGAGGG
rJMFF017M17+          GGCGGAAACCAAGCAGCTGGTGCTGGTGGTGCTGCTGCTGCAGACCGCCATGCGGGAGGG
                      ____________________________________________________________
consensus             GGCGGAAACCAAGCAGCTGGTGCTGGTGGTGCTGCTGCTGCAGACCGCCATGCGGGAGGG
 
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rJMSF049P19+          TCACTTTAGGAGGATTGGGTCAAATGTGTCATCTTATGTGAATATGGTTTCCGACACTCT
rJMFF017M17+          TCACTTTAGGAGGATTGGGTCAAATGTGTCATCTTATGTGAATATGGTTTCCGACACTCT
                      ____________________________________________________________
consensus             TCACTTTAGGAGGATTGGGTCAAATGTGTCATCTTATGTGAATATGGTTTCCGACACTCT
 
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rJMSF049P19+          CAGAAACACTATTCCAAAGGCAGTTGTTCATTGCCAAGTGAAGGAGGCCAAGCATTCTTT
rJMFF017M17+          CAGAAACACTATTCCAAAGGCAGTTGTTCATTGCCAAGTGAAGGAGGCCAAGCATTCTTT
                      ____________________________________________________________
consensus             CAGAAACACTATTCCAAAGGCAGTTGTTCATTGCCAAGTGAAGGAGGCCAAGCATTCTTT
 
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rJMSF049P19+          ATTGAATCGCTTTTACGTGCAGATTGGGAAGAAAGAGGGTAAGGCACTTGGAGAACTGTT
rJMFF017M17+          ATTGAATCGCTTTTACGTGCAGATTGGGAAGAAAGAGGGTAAGGCACTTGGAGAACTGTT
                      ____________________________________________________________
consensus             ATTGAATCGCTTTTACGTGCAGATTGGGAAGAAAGAGGGTAAGGCACTTGGAGAACTGTT
 
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rJMSF049P19+          GGATGAGGATCCAGCATTGATGGAAAGAAGACAGCAATGCGCAAAGAGGCTCGAACTGTA
rJMFF017M17+          GGATGAGGATCCAGCATTGATGGAAAGAAGACAGCAATGCGCAAAGAGGCTCGAACTGTA
                      ____________________________________________________________
consensus             GGATGAGGATCCAGCATTGATGGAAAGAAGACAGCAATGCGCAAAGAGGCTCGAACTGTA
 
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rJMSF049P19+          CAAGAAAGCGAGGGACGAAATCGACTCTGTATCATGGGCTCGATGAGATTAGT       
rJMFF017M17+          CAAGAAAGCGAGGGACGAAATCGACTCTGTATCATGGGCTCGATGAGATTAGTATATATA
                      ____________________________________________________________
consensus             CAAGAAAGCGAGGGACGAAATCGACTCTGTATCATGGGCTCGATGAGATTAGTATATATA
 
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rJMFF017M17+          GGTTGGAGATGTCGGTATTATATCTCTCTCAATTGAATCCAGCCATTATGGCGGGTGCCT
                      ____________________________________________________________
consensus             GGTTGGAGATGTCGGTATTATATCTCTCTCAATTGAATCCAGCCATTATGGCGGGTGCCT
 
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rJMFF017M17+          TATTTGACAACCCAGATTCTTTATTTGTATTCATTTATATATGGTTTGGAGTGTTGTGCT
                      ____________________________________________________________
consensus             TATTTGACAACCCAGATTCTTTATTTGTATTCATTTATATATGGTTTGGAGTGTTGTGCT
 
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rJMFF017M17+          TCGCGTTTGCCAATTTTGTTTTTGGCAGCTATTCTGAATGACTGTTGTAATTGCAGTAAT
                      ____________________________________________________________
consensus             TCGCGTTTGCCAATTTTGTTTTTGGCAGCTATTCTGAATGACTGTTGTAATTGCAGTAAT