Contig 005385:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004O20Sequence520003133 (5)ref|XP_011082365.1|3e-64PREDICTED: transcription factor MYC4-like [Sesamum indicum]624005385 (4)ref|NP_001288107.1|1e-28uncharacterized protein LOC101261048 [Solanum lycopersicum] gb|AIC63945.1| MYC1
JMFF016H12Sequence604003133 (5)gb|AAQ14332.1|AF283507_12e-47MYC2 [Catharanthus roseus]753005385 (4)ref|XP_009609942.1|6e-43PREDICTED: transcription factor MYC2-like [Nicotiana tomentosiformis]
JMFF038N07Sequence421003133 (5)gb|AAQ14332.1|AF283507_12e-29MYC2 [Catharanthus roseus]768005385 (4)ref|XP_009780487.1|3e-62PREDICTED: transcription factor MYC2-like [Nicotiana sylvestris]
JMSF034D18Sequence631003133 (5)gb|AAQ14332.1|AF283507_13e-56MYC2 [Catharanthus roseus]733005385 (4)gb|ADH04267.1|2e-80MYC1a transcription factor [Nicotiana tabacum] gb|ADU60101.1| MYC2b transcriptio

Alignment

This contig is upended


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rJMSF034D18+                                          AGCCATGAACCATGTAGAAGCAGAGAGG
rJMFF038N07+                                                   CCATGTAGAAGCAGAGAGG
                      ____________________________________________________________
consensus                                             AGCCATGAACCATGTAGAAGCAGAGAGG
 
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rJMSF034D18+          CAGAGGAGGGAGAAGTTGAACCAAAGGTTCTATGCCTTAAGGGCAGTAGTCCCAAATGTG
rJMFF038N07+          CAGAGGAGGGAGAAGTTGAACCAAAGGTTCTATGCCTTAAGGGCAGTAGTCCCAAATGTG
                      ____________________________________________________________
consensus             CAGAGGAGGGAGAAGTTGAACCAAAGGTTCTATGCCTTAAGGGCAGTAGTCCCAAATGTG
 
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rJMSF034D18+          TCCAAAATGGACAAAGCTTCCCTTCTCGGGGACGCCATTGCCTACATAAACGAGCTGAAA
rJMFF038N07+          TCCAAAATGGACAAAGCTTCCNTTCTCGGGGACGCCATTGCCTACATAAACGAGCTGAAA
                      ____________________________________________________________
consensus             TCCAAAATGGACAAAGCTTCCCTTCTCGGGGACGCCATTGCCTACATAAACGAGCTGAAA
 
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rJMSF034D18+          TCAAAGCTCGAAACCTCGGAAT-CCTACATAGACGACCTCAAGATCCAAGCCCAATCCTT
rJMFF038N07+          TCAAAGCTCGAAACCTCGGAATCCCTACATAGACGACCTCAAGATCCAAGCCCAATCCTT
rJMFF016H12+                                   TACATAGACGACCTCAAGATCCAAGCCCAATCCTT
                      ____________________________________________________________
consensus             TCAAAGCTCGAAACCTCGGAATCCCTACATAGACGACCTCAAGATCCAAGCCCAATCCTT
 
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rJMSF034D18+          AAAGAAAGAATTATCCACCAAAGAGCCCCGCCATCCCGACCCCAACCCCAAGAAGACTAC
rJMFF038N07+          AAAGAAAGAATTATCCACCAAAGAGCCCCGCCATCCCGACCCCAACCCCAAGAAGACTAC
rJMFF004O20+                                                       CCCCAAGAAGACTAC
rJMFF016H12+          AAAGAAAGAATTATCCACCAAAGAGCCCCGCCATCCCGACCCCAACCCCAAGAAGACTAC
                      ____________________________________________________________
consensus             AAAGAAAGAATTATCCACCAAAGAGCCCCGCCATCCCGACCCCAACCCCAAGAAGACTAC
 
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rJMSF034D18+          CACCCCACA-CAAGATCCCAGACATGGATGTGGATGTGAAAGTCATGGGCTGGGACGCCA
rJMFF038N07+          CACCCCACA-CAAGATCCCAGACATGGATGTGGATGTGAAAGTCATGGGCTGGGACGCCA
rJMFF004O20+          CACCCCACACCAAGATCCCAGACATGGATGTGGATGTGAAAGTCATGGGCTGGGACGCCA
rJMFF016H12+          CACCCCACA-CAAGATCCCAGACATGGATGTGGATGTGAAAGTCATGGGCTGGGACGCCA
                      ____________________________________________________________
consensus             CACCCCACA-CAAGATCCCAGACATGGATGTGGATGTGAAAGTCATGGGCTGGGACGCCA
 
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rJMSF034D18+          TGATTCGAATACAATGCACCAAAAAGAACCACCCCGC-AGCTCGCCTAATGGTCGCTCTC
rJMFF038N07+          TGATTCGAATACAATGCACCAAAAAGAACCACCCCGC-AGCTCGCCTAATGGTCGCTCTC
rJMFF004O20+          TGATTCGAATACAATGCACCAAAAAGAACCACCCCGCAAGCTCGCCTAATGGTCGCTCTC
rJMFF016H12+          TGATTCGAATACAATGCACCAAAAAGAACCACCCCGC-AGCTCGCCTAATGGTCGCTCTC
                      ____________________________________________________________
consensus             TGATTCGAATACAATGCACCAAAAAGAACCACCCCGC-AGCTCGCCTAATGGTCGCTCTC
 
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rJMSF034D18+          AAGGACTTGGACCTAGAGGTCACCCATGCCAGTGTTTCCGTGATGAATGATTTGATGATC
rJMFF038N07+          AAGGACTTGGACCTAGAGGTCACCCATGCCAGTGTTTCCGTGATGAATGATTTGATGATC
rJMFF004O20+          AAGGACTTGGACCTAGAGGTCACCCATGCCAGTGTTTCCGTGATGAATGATTTGATGATC
rJMFF016H12+          AAGGACTTGGACCTAGAGGTCACCCATGCCAGTGTTTCCGTGATGAATGATTTGATGATC
                      ____________________________________________________________
consensus             AAGGACTTGGACCTAGAGGTCACCCATGCCAGTGTTTCCGTGATGAATGATTTGATGATC
 
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rJMSF034D18+          CAACAAGCCGCCGTGAAGATGGGAACCCGGCTTTACAATCAAGATCAGCTTCGGTTAGCA
rJMFF038N07+          CAACAAGCCGCCGTGAAGATGGGAACCCGGCTTTACAATCAAGATCAGCTTCGGTTAGCA
rJMFF004O20+          CAACAAGCCGCCGTGAAGATGGGAACCCGGCTTTACAATCAAGATCAGCTTCGGTTAGCA
rJMFF016H12+          CAACAAGCCGCCGTGAAGATGGGAACCCGGCTTTACAATCAAGATCAGCTTCGGTTAGCA
                      ____________________________________________________________
consensus             CAACAAGCCGCCGTGAAGATGGGAACCCGGCTTTACAATCAAGATCAGCTTCGGTTAGCA
 
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rJMSF034D18+          TTGATATCCAAACTCGCAGAAACTCTATGAAATGAAGATCCATTTTTAGGCTCTGTATTG
rJMFF038N07+          TTGATATCCAAACTCGCAGAAACTCTATGAAATGAAGATCCATTTTTAGGCTCTGTATTG
rJMFF004O20+          TTGATATCCAAACTCGCAGAAACTCTATGAAATGAAGATCCATTTTTAGGCTCTGTATTG
rJMFF016H12+          TTGATATCCAAACTCGCAGAAACTCTATGAAATGAAGATCCATTTTTAGGCTCTGTATTG
                      ____________________________________________________________
consensus             TTGATATCCAAACTCGCAGAAACTCTATGAAATGAAGATCCATTTTTAGGCTCTGTATTG
 
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rJMSF034D18+          TGAGCTAACTCTCTCTATATATAAATATTTTTGCCCATCAGACTCAGTTGAAAGTAGTAG
rJMFF038N07+          TGAGCTAACTCTCTCTATATATAAATATTTTTGCCCATCAGACTCAGTTGAAAGTAGTAG
rJMFF004O20+          TGAGCTAACTCTCTCTATATATAAATATTTTTGCCCATCAGACTCAGTTGAAAGTAGTAG
rJMFF016H12+          TGAGCTAACTCTCTCTATATATAAATATTTTTGCCCATCAGACTCAGTTGAAAGTAGTAG
                      ____________________________________________________________
consensus             TGAGCTAACTCTCTCTATATATAAATATTTTTGCCCATCAGACTCAGTTGAAAGTAGTAG
 
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rJMSF034D18+          TTCCACTCCAGAGTTTGATAGCTGAGGAAATGCTAATTTTATGCAGCTTTCAATCTCTTA
rJMFF038N07+          TTCCACTCCAGAGTTTGATAGCTGAGGAAATGCTAATTTTATGCAGCTTTCAATCTCTTA
rJMFF004O20+          TTCCACTCCAGAGTTTGATAGCTGAGGAAATGCTAATTTTATGCAGCTTTCAATCTCTTA
rJMFF016H12+          TTCCACTCCAGAGTTTGATAGCTGAGGAAATGCTAATTTTATGCAGCTTTCAATCTCTTA
                      ____________________________________________________________
consensus             TTCCACTCCAGAGTTTGATAGCTGAGGAAATGCTAATTTTATGCAGCTTTCAATCTCTTA
 
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rJMSF034D18+          GTTTTGGTTTTATACTATCAGTTCGTTGTTGTATATAAACCCGAAACT            
rJMFF038N07+          GTTTTGGTTTTATACTATCAGTTCGTTGTTGTATATAAACCCGAAACTTGATTGTAACAT
rJMFF004O20+          GTTTTGGTTTTATACTATCAGTTCGTTGTTGTATATAAACCCGAAACTTGATTGTAACAT
rJMFF016H12+          GTTTTGGTTTTATACTATCAGTTCGTTGTTGTATATAAACCCGAAACTTGATTGTAACAT
                      ____________________________________________________________
consensus             GTTTTGGTTTTATACTATCAGTTCGTTGTTGTATATAAACCCGAAACTTGATTGTAACAT
 
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rJMFF038N07+          GTCGGGCTTTTAATCTGTGTAAT                                     
rJMFF004O20+          GTCGGGCTTTTAATCTGTGTAATTAAGACAGAATCCGCTTTGCTTTCATCTTTTGTCTCT
rJMFF016H12+          GTCGGGCTTTTAATCTGTGTAATTAAGACAGAATCCGCTTTGCTTTCATCTTTTGTCTCT
                      ____________________________________________________________
consensus             GTCGGGCTTTTAATCTGTGTAATTAAGACAGAATCCGCTTTGCTTTCATCTTTTGTCTCT
 
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rJMFF004O20+          CAGATTTGCACTTCTGTACTCATAGTTCTTCAGATAAACACAGGGTGCAAATTGGTTGTG
rJMFF016H12+          CAGATTTGCACTTCTGTACTCATAGTTCTTCAGATAAACACAGGGTGCAAATTGGTTGTG
                      ____________________________________________________________
consensus             CAGATTTGCACTTCTGTACTCATAGTTCTTCAGATAAACACAGGGTGCAAATTGGTTGTG
 
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rJMFF004O20+          GATGAATTC                                                   
rJMFF016H12+          GATGAATTCCAATCTTTATGAAGGGAGATGTATTGTGATACTATTTGTTCAGCATCTAAT
                      ____________________________________________________________
consensus             GATGAATTCCAATCTTTATGAAGGGAGATGTATTGTGATACTATTTGTTCAGCATCTAAT