| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF002I15 | Sequence | 551 | 002090 (13) | emb|CDP15036.1| | 1e-69 | unnamed protein product [Coffea canephora] | 719 | 005381 (8) | ref|XP_004242844.1| | 1e-134 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 6 homolog [Solanum lyco |
| JMFF005C02 | Sequence | 573 | 002090 (13) | emb|CDP15036.1| | 7e-82 | unnamed protein product [Coffea canephora] | 715 | 005381 (8) | ref|XP_003525646.1| | 1e-118 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 6 homolog [Glycine max] |
| JMFF015M23 | Sequence | 561 | 002090 (13) | emb|CDP15036.1| | 1e-78 | unnamed protein product [Coffea canephora] | 736 | 005381 (8) | ref|XP_003525624.1| | 9e-124 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 6 homolog [Glycine max] |
| JMFF033D23 | Sequence | 562 | 002090 (13) | emb|CDP15036.1| | 1e-78 | unnamed protein product [Coffea canephora] | 688 | 005381 (8) | ref|XP_003525646.1| | 2e-111 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 6 homolog [Glycine max] |
| JMFF046O15 | Sequence | 581 | 002090 (13) | emb|CDP15036.1| | 8e-77 | unnamed protein product [Coffea canephora] | 519 | 005381 (8) | ref|XP_003525646.1| | 2e-84 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 6 homolog [Glycine max] |
| JMFF048L16 | Sequence | 496 | 002090 (13) | emb|CDP15036.1| | 4e-64 | unnamed protein product [Coffea canephora] | 331 | 005381 (8) | emb|CAB71134.1| | 1e-21 | putative proteasome regulatory subunit [Cicer arietinum] |
| JMSF006M10 | Sequence | 318 | 002090 (13) | emb|CDP15036.1| | 2e-30 | unnamed protein product [Coffea canephora] | 148 | 005381 (8) | emb|CAB71134.1| | 9e-19 | putative proteasome regulatory subunit [Cicer arietinum] |
| JMSF038A13 | Sequence | 668 | 002090 (13) | emb|CDP15036.1| | 4e-101 | unnamed protein product [Coffea canephora] | 804 | 005381 (8) | ref|XP_004242844.1| | 1e-141 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 6 homolog [Solanum lyco |
This contig is upended
. : . : . : . : . : . :
rJMFF002I15+ T
rJMSF038A13+ GGTCTACGAAGGACTCTTCTGCATGT
____________________________________________________________
consensus GGTCTACGAAGGACTCTTCTGCATGT
. : . : . : . : . : . :
rJMFF002I15+ CCACCCGCAACTTCAAGAGAGCAGCTGACCTTTTCCTTGATTCTATCTCAACATTTACAA
rJMSF038A13+ CCACCCGCAACTTCAAGAGAGCAGCTGACCTTTTCCTTGATTCTATCTCAACATTTACAA
rJMFF015M23+ ATCTCAACATTTACAA
____________________________________________________________
consensus CCACCCGCAACTTCAAGAGAGCAGCTGACCTTTTCCTTGATTCTATCTCAACATTTACAA
. : . : . : . : . : . :
rJMFF002I15+ CCTATGAACTTTTTCCTTATGACACTTTCATATTTTATACAGTCCTTACAAGCATTATTA
rJMSF038A13+ CCTATGAACTTTTTCCTTATGACACTTTCATATTTTATACAGTCCTTACAAGCATTATTA
rJMFF005C02+ GAACTTTTTCCTTATGACACTTTCATATTTTATACAGTCCTTACAAGCATTATTA
rJMFF033D23+ TTTTATACAGTCCTTACAAGCATTATTA
rJMFF015M23+ CNTATGAACTTTTTCCTTATGACACTTTCATATTTTATACAGTCCTTACAAGCATTATTA
____________________________________________________________
consensus CCTATGAACTTTTTCCTTATGACACTTTCATATTTTATACAGTCCTTACAAGCATTATTA
. : . : . : . : . : . :
rJMFF002I15+ CCTTGGATCGTGTTTCCCTGAAACAGAAGGTAGTGGATGCACCAGAGATCTTGACAGTTA
rJMSF038A13+ CCTTGGATCGTGTTTCCCTGAAACAGAAGGTAGTGGATGCACCAGAGATCTTGACAGTTA
rJMFF005C02+ CCTTGGATCGTGTTTCCCTGAAACAGAAGGTAGTGGATGCACCAGAGATCTTGACAGTTA
rJMFF033D23+ CCTTGGATCGTGTTTCCCTGAAACAGAAGGTAGTGGATGCACCAGAGATCTTGACAGTTA
rJMFF015M23+ CCTTGGATCGTGTTTCCCTGAAACAGAAGGTAGTGGATGCACCAGAGATCTTGACAGTTA
____________________________________________________________
consensus CCTTGGATCGTGTTTCCCTGAAACAGAAGGTAGTGGATGCACCAGAGATCTTGACAGTTA
. : . : . : . : . : . :
rJMFF002I15+ TCGGAAAGATCCCTTATCTTTCTGAGTTTTTGAACTCCTTATATGATTGTCAATACAAGG
rJMFF046O15+ GAGTTTTTGAACTCCTTATATGATTGTCAATACAAGG
rJMSF038A13+ TCGGAAAGATCCCTTATCTTTCTGAGTTTTTGAACTCCTTATATGATTGTCAATACAAGG
rJMFF005C02+ TCGGAAAGATCCCTTATCTTTCTGAGTTTTTGAACTCCTTATATGATTGTCAATACAAGG
rJMFF033D23+ TCGGAAAGATCCCTTATCTTTCTGAGTTTTTGAACTCCTTATATGATTGTCAATACAAGG
rJMFF015M23+ TCGGAAAGATCCCTTATCTTTCTGAGTTTTTGAACTCCTTATATGATTGTCAATACAAGG
____________________________________________________________
consensus TCGGAAAGATCCCTTATCTTTCTGAGTTTTTGAACTCCTTATATGATTGTCAATACAAGG
. : . : . : . : . : . :
rJMFF002I15+ CATTCTTTTCTGCCTTTGCTGGCATAACAGAGCATATTAAGTTGGATCGCTACTTGCACC
rJMFF046O15+ CATTCTTTTCTGCCTTTGCTGGCATAACAGAGCATATTAAGTTGGATCGCTACTTGCACC
rJMSF038A13+ CATTCTTTTCTGCCTTTGCTGGCATAACAGAGCATATTAAGTTGGATCGCTACTTGCACC
rJMFF005C02+ CATTCTTTTCTGCCTTTGCTGGCATAACAGAGCATATTAAGTTGGATCGCTACTTGCACC
rJMFF033D23+ CATTCTTTTCTGCCTTTGCTGGCATAACAGAGCATATTAAGTTGGATCGCTACTTGCACC
rJMFF015M23+ CATTCTTTTCTGCCTTTGCTGGCATAACAGAGCATATTAAGTTGGATCGCTACTTGCACC
____________________________________________________________
consensus CATTCTTTTCTGCCTTTGCTGGCATAACAGAGCATATTAAGTTGGATCGCTACTTGCACC
. : . : . : . : . : . :
rJMFF002I15+ CACACTTCCGTTATTACATGAGGGAGGTGCGAACTGTTGTTTATTCACAGTTCTTGGAGT
rJMFF046O15+ CACACTTCCGTTATTACATGAGGGAGGTGCGAACTGTTGTTTATTCACAGTTCTTGGAGT
rJMSF038A13+ CACACTTCCGTTATTACATGAGGGAGGTGCGAACTGTTGTTTATTCACAGTTCTTGGAGT
rJMFF005C02+ CACACTTCCGTTATTACATGAGGGAGGTGCGAACTGTTGTTTATTCACAGTTCTTGGAGT
rJMFF033D23+ CACACTTCCGTTATTACATGAGGGAGGTGCGAACTGTTGTTTATTCACAGTTCTTGGAGT
rJMFF015M23+ CACACTTCCGTTATTACATGAGGGAGGTGCGAACTGTTGTTTATTCACAGTTCTTGGAGT
____________________________________________________________
consensus CACACTTCCGTTATTACATGAGGGAGGTGCGAACTGTTGTTTATTCACAGTTCTTGGAGT
. : . : . : . : . : . :
rJMFF002I15+ CATATAAAAGTGTCACAATTGAGGTGATGGCTAAGGCATTTGGGGTGACTGAGGACTTCA
rJMFF046O15+ CATATAAAAGTGTCACAATTGAGGTGATGGCTAAGGCATTTGGGGTGACTGAGGACTTCA
rJMSF038A13+ CATATAAAAGTGTCACAATTGAGGTGATGGCTAAGGCATTTGGGGTGACTGAGGACTTCA
rJMFF005C02+ CATATAAAAGTGTCACAATTGAGGTGATGGCTAAGGCATTTGGGGTGACTGAGGACTTCA
rJMFF033D23+ CATATAAAAGTGTCACAATTGAGGTGATGGCTAAGGCATTTGGGGTGACTGAGGACTTCA
rJMFF015M23+ CATATAAAAGTGTCACAATTGAGGTGATGGCTAAGGCATTTGGGGTGACTGAGGACTTCA
____________________________________________________________
consensus CATATAAAAGTGTCACAATTGAGGTGATGGCTAAGGCATTTGGGGTGACTGAGGACTTCA
. : . : . : . : . : . :
rJMFF002I15+ TTGATACGGAGCTTTCTCGGTTTATTGCTGCAGGGAAGCTACATTGCAAGATTGACAAGG
rJMFF046O15+ TTGATACGGAGCTTTCTCGGTTTATTGCTGCAGGGAAGCTACATTGCAAGATTGACAAGG
rJMFF048L16+ TGCAAGATTGACAAGG
rJMSF006M10+ ACATTGCAAGATTGNCAAGG
rJMSF038A13+ TTGATACGGAGCTTTCTCGGTTTATTGCTGCAGGGAAGCTACATTGCAAGATTGACAAGG
rJMFF005C02+ TTGATACGGAGCTTTCTCGGTTTATTGCTGCAGGGAAGCTACATTGCAAGATTGACAAGG
rJMFF033D23+ TTGATACGGAGCTTTCTCGGTTTATTGCTGCAGGGAAGCTACATTGCAAGATTGACAAGG
rJMFF015M23+ TTGATACGGAGCTTTCTCGGTTTATTGCTGCAGGGAAGCTACATTGCAAGATTGACAAGG
____________________________________________________________
consensus TTGATACGGAGCTTTCTCGGTTTATTGCTGCAGGGAAGCTACATTGCAAGATTGACAAGG
. : . : . : . : . : . :
rJMFF002I15+ TTGCTGGTGTGCTAGAAACAAATCGGCCCGATGCTAAGAATGCTCTGTACCAGGCAACCA
rJMFF046O15+ TTGCTGGTGTGCTAGAAACAAATCGGCCCGATGCTAAGAATGCTCTGTACCAGGCAACCA
rJMFF048L16+ TTGCTGGTGTGCTAGAAACAAATCGGCCCGATGCTAAGAATGCTCTGTTCCAGGCAACCA
rJMSF006M10+ TTGCTGGTGNGCTAGAAACAAATCGGCCCGANGCTAAGAATGCTNTGTNCCAGGCAACCA
rJMSF038A13+ TTGCTGGTGTGCTAGAAACAAATCGGCCCGATGCTAAGAATGCTCTGTACCAGGCAACCA
rJMFF005C02+ TTGCTGGTGTGCTAGAAACAAATCGGCCCGATGCTAAGAATGCTCTGTACCAGGCAACCA
rJMFF033D23+ TTGCTGGTGTGCTAGAAACAAATCGGCCCGATGCTAAGAATGCTCTGTACCAGGCAACCA
rJMFF015M23+ TTGCTGGTGTGCTAGAAACAAATCGGCCCGATGCTAAGAATGCTCTGTACCAGGCAACCA
____________________________________________________________
consensus TTGCTGGTGTGCTAGAAACAAATCGGCCCGATGCTAAGAATGCTCTGTACCAGGCAACCA
. : . : . : . : . : . :
rJMFF002I15+ TCAAACAAGGGGATTTCTTGTTGAACAGAATCCAAAAGCTTTCGCGAGTTATTGATCTCT
rJMFF046O15+ TCAAACAAGGGGATTTCTTGTTGAACAGAATCCAAAAGCTTTCGCGAGTTATTGATCTCT
rJMFF048L16+ TCAAACAAGGGGATTTCTTGTTGAACAGAATCCAAAAGCTTTCGCGAGTTATTGATCTCT
rJMSF006M10+ TCAAACAAGGGGANTTCTTGTTGAACAGAATCCAAAAGCTTTCGCGAGTTATTGATCTCT
rJMSF038A13+ TCAAACAAGGGGATTTCTTGTTGAACAGAATCCAAAAGCTTTCGCGAGTTATTGATCTCT
rJMFF005C02+ TCAAACAAGGGGATTTCTTGTTGAACAGAATCCAAAAGCTTTCGCGAGTTATTGATCTCT
rJMFF033D23+ TCAAACAAGGGGATTTCTTGTTGAACAGAATCCAAAAGCTTTCGCGAGTTATTGATCTCT
rJMFF015M23+ TCAAACAAGGGGATTTCTTGTTGAACAGAATCCAAAAGCTTTCGCGAGTTATTGATCTCT
____________________________________________________________
consensus TCAAACAAGGGGATTTCTTGTTGAACAGAATCCAAAAGCTTTCGCGAGTTATTGATCTCT
. : . : . : . : . : . :
rJMFF002I15+ AGGCAATTTCTTCCTACACTAGCACCAGCCTAGATGTACTCACGGTTCCTGAATACTGAA
rJMFF046O15+ AGGCAATTTCTTCCTACACTAGCACCAGTCTAGATGTACTCACGGTTCCTGAATACTGAA
rJMFF048L16+ AGGCAATTTCTTCCTACACTAGCACCAGCCTAGATGTACTCACGGTTCCTGAATACTGAA
rJMSF006M10+ AGGCAATT
rJMSF038A13+ AGGCAATTTCTTCCTACACTAGCACCAGCCTAGATGTACTCACGGTTCCTGAATACTGAA
rJMFF005C02+ AGGCAATTTCTTCCTACACTAGCACCAGCCTAGATGTACTCACGGTTCCTGAATACTGAA
rJMFF033D23+ AGGCAATTTCTTCCTACACTAGCACCAGCCTAGATGTACTCACGGTTCCTGAATACTGAA
rJMFF015M23+ AGGCAATTTCTTCCTACACTAGCACCAGCCTAGATGTACTCACGGTTCCTGAATACTGAA
____________________________________________________________
consensus AGGCAATTTCTTCCTACACTAGCACCAGCCTAGATGTACTCACGGTTCCTGAATACTGAA
. : . : . : . : . : . :
rJMFF002I15+ TTTGGTTAATTTTCTTATGTAACTGAAAAATCTTATCTTATTTT
rJMFF046O15+ TTTGGTTAATTTTCTTATGTAACTGAAAAATCTTATCTTATTTTTCTGTTTGAATTAAAA
rJMFF048L16+ TTTGGTTAATTTTCTTA
rJMSF038A13+ TTTGGTTAATTTTCTTATGTAACTGAAAAATCTTATCTTATTTTTCTGTTTGAATTAAAA
rJMFF005C02+ TTTGGTTAATTTTCTTATGTAACTGAAAAATCTTATCTTATTTTTCTGTTTGAATTAAAA
rJMFF033D23+ TTTGGTTAATTTTCTTATGTAACTGAAAAATCTTATCTTATTTTTCTGTTTGAATTAAAA
rJMFF015M23+ TTTGGTTAATTTTCTTATGTAACTGAAAAATCTTATCTTATTTTTCTGTTTGAATTAAAA
____________________________________________________________
consensus TTTGGTTAATTTTCTTATGTAACTGAAAAATCTTATCTTATTTTTCTGTTTGAATTAAAA
. : . : . : . : . : . :
rJMFF046O15+ AT
rJMSF038A13+ ATATTTTCCATTACCCGTGGATTTTCTTGATTGGGTAATTTTCCTTGCCGTTC
rJMFF005C02+ ATATTTTCCATTACCCGTGGATTTTCTTGATTGGGTAATTTTCCTTGCCGTTCAGAGTTG
rJMFF033D23+ ATATTTTCCATTACCCGTGGATTTTCTTGATTGGGTAATTTTCCTTGCCGTTCAGAGTTG
rJMFF015M23+ ATATTTTCCATTACCCGTGGATTTTCTTGATTGGGTAATTTTCCTTGCCGTTCAGAGTTG
____________________________________________________________
consensus ATATTTTCCATTACCCGTGGATTTTCTTGATTGGGTAATTTTCCTTGCCGTTCAGAGTTG