Contig 005375:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014D21Sequence547000160 (3)ref|XP_009619467.1|1e-69PREDICTED: NAC domain-containing protein 78-like [Nicotiana tomentosiformis]768005375 (2)gb|AAM34767.1|AF509867_11e-99nam-like protein 4 [Petunia x hybrida]
JMFF028E07Sequence498000160 (3)ref|XP_009619467.1|2e-53PREDICTED: NAC domain-containing protein 78-like [Nicotiana tomentosiformis]645005375 (2)ref|XP_009619467.1|3e-72PREDICTED: NAC domain-containing protein 78-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMFF014D21+                     TCCCGGAGGTGTAGCCGAAGATGATGTAGGCAATGGTGATGATGCACGA
                      ____________________________________________________________
consensus                        TCCCGGAGGTGTAGCCGAAGATGATGTAGGCAATGGTGATGATGCACGA
 
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rJMFF014D21+          GTTGATGGCAACGACCTTGACCAGGGTGCTCTATGCAAGGCTCCCGAGAGTCCAGTCGAA
                      ____________________________________________________________
consensus             GTTGATGGCAACGACCTTGACCAGGGTGCTCTATGCAAGGCTCCCGAGAGTCCAGTCGAA
 
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rJMFF028E07+                    TTTCATTTGTTTGCAAAAGAGAGAGATCGGAGGATCCTGAACCCCTCTCT
rJMFF014D21+          CCATTGTCCCTTTCATTTGTTTGCAAAAGAGAGAGATCGGAGGATCCTGAACCCCTCTC-
                      ____________________________________________________________
consensus             CCATTGTCCCTTTCATTTGTTTGCAAAAGAGAGAGATCGGAGGATCCTGAACCCCTCTCT
 
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rJMFF028E07+          TTTGGCCCAAAGCAAAAGATCGAAGCAGGATTGCCCTAGCTCAAGCCATGCAAATGGGTC
rJMFF014D21+          TCTGGCCCAAAGCAAAAGATCGAAGCAGGATTGCCCTAGCTCAAGCCATGCAAATGGGTC
                      ____________________________________________________________
consensus             TTTGGCCCAAAGCAAAAGATCGAAGCAGGATTGCCCTAGCTCAAGCCATGCAAATGGGTC
 
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rJMFF028E07+          GGAAGATTCGACTACCACAAGCCAGGATCCTCCAACCATGATGATGACGACAAATGATTC
rJMFF014D21+          GGAAGATTCGACTACCACAAGCCAGGATCCTCCAACCATGATGATGACGACAAATGATTC
                      ____________________________________________________________
consensus             GGAAGATTCGACTACCACAAGCCAGGATCCTCCAACCATGATGATGACGACAAATGATTC
 
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rJMFF028E07+          CCCCGTTCTCTTAGAATTCCCCCTGTTGGACCCCATTGAACCCAGGGAGAACCAGCCCAG
rJMFF014D21+          CCCCGTTCTCTTAGAATTCCCCCTGTTGGACCCCATTGAACCCAGGGAGAACCAGCCCAG
                      ____________________________________________________________
consensus             CCCCGTTCTCTTAGAATTCCCCCTGTTGGACCCCATTGAACCCAGGGAGAACCAGCCCAG
 
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rJMFF028E07+          CAACGCCCCTACTTTTGATTCCTCCACCCTCGAGAAATCAGTGCCTCCTGGATACCTCAA
rJMFF014D21+          CAACGCCCCTACTTTTGATTCCTCCACCCTCGAGAAATCAGTGCCTCCTGGATACCTCAA
                      ____________________________________________________________
consensus             CAACGCCCCTACTTTTGATTCCTCCACCCTCGAGAAATCAGTGCCTCCTGGATACCTCAA
 
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rJMFF028E07+          GTTCATTAGCAACTTGGAGAACGAGATCCTGAACGTGTCCATGGAGAGGGAGACACTGAA
rJMFF014D21+          GTTCATTAGCAACTTGGAGAACGAGATCCTGAACGTGTCCATGGAGAGGGAGACACTGAA
                      ____________________________________________________________
consensus             GTTCATTAGCAACTTGGAGAACGAGATCCTGAACGTGTCCATGGAGAGGGAGACACTGAA
 
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rJMFF028E07+          GATTGAAGTAATGAGGGCACAAGCCATGATCAACATCCTTCAATCGCGCATCGACCTTTT
rJMFF014D21+          GATTGAAGTAATGAGGGCACAAGCCATGATCAACATCCTTCAATCGCGCATCGACCTTTT
                      ____________________________________________________________
consensus             GATTGAAGTAATGAGGGCACAAGCCATGATCAACATCCTTCAATCGCGCATCGACCTTTT
 
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rJMFF028E07+          GAACAAGGAGAACGAGGACCTTAGACGAGTTGTCCGAGGGGGTT                
rJMFF014D21+          GAACAAGGAGAACGAGGACCTTAGACGAGTTGTCCGAGGGGGTTAGCTAGTAGAGCCGCA
                      ____________________________________________________________
consensus             GAACAAGGAGAACGAGGACCTTAGACGAGTTGTCCGAGGGGGTTAGCTAGTAGAGCCGCA
 
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rJMFF014D21+          TTTCCTATTTGCTAGCTTTTTGTAGCTCTACATGACATCGATCTCAGATGGCATCAGGAA
                      ____________________________________________________________
consensus             TTTCCTATTTGCTAGCTTTTTGTAGCTCTACATGACATCGATCTCAGATGGCATCAGGAA
 
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rJMFF014D21+          GTGGAAGACGATGTGCAAAGCGATGCTGGAGATGTTCGTTCTACTTCATCTGTCGACAAC
                      ____________________________________________________________
consensus             GTGGAAGACGATGTGCAAAGCGATGCTGGAGATGTTCGTTCTACTTCATCTGTCGACAAC
 
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rJMFF014D21+          TCTGTAATATCTGTGTAATAGTTGACTGAGTACATGAAACCAGATGTGCCAGTAGCTAGA
                      ____________________________________________________________
consensus             TCTGTAATATCTGTGTAATAGTTGACTGAGTACATGAAACCAGATGTGCCAGTAGCTAGA