Contig 005355:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010B07Sequence571010631 (3)emb|CDP13813.1|6e-33unnamed protein product [Coffea canephora]638005355 (3)ref|XP_009599597.1|3e-53PREDICTED: rab3 GTPase-activating protein catalytic subunit [Nicotiana tomentos
JMFF031P20Sequence600010631 (3)emb|CDP13813.1|3e-35unnamed protein product [Coffea canephora]649005355 (3)ref|XP_009599597.1|4e-54PREDICTED: rab3 GTPase-activating protein catalytic subunit [Nicotiana tomentos
JMSF014D06Sequence511010631 (3)emb|CDP13813.1|2e-23unnamed protein product [Coffea canephora]789005355 (3)ref|XP_009599597.1|2e-83PREDICTED: rab3 GTPase-activating protein catalytic subunit [Nicotiana tomentos

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF014D06+ AAGGCGGCAANCCCTNGTTGTATATTAGAGGATTTTGTGAGATGGCATTC
                      ____________________________________________________________
consensus AAGGCGGCAANCCCTNGTTGTATATTAGAGGATTTTGTGAGATGGCATTC
 
. : . : . : . : . : . :
rJMSF014D06+ TCCTCCAGACTGGATGGAAAATGAGAGTAGTGAATCTAATGTAACATCTGAAAGCAGCGA
                      ____________________________________________________________
consensus TCCTCCAGACTGGATGGAAAATGAGAGTAGTGAATCTAATGTAACATCTGAAAGCAGCGA
 
. : . : . : . : . : . :
rJMSF014D06+ TTCATCTGTGAGAGGCCAACTGAGTAGTCGGATGCAGAAAGAAGGTAATTTGTGGCGTGA
                      ____________________________________________________________
consensus TTCATCTGTGAGAGGCCAACTGAGTAGTCGGATGCAGAAAGAAGGTAATTTGTGGCGTGA
 
. : . : . : . : . : . :
rJMSF014D06+ ATTGTGGGAAACCTCAAAACCAATACCAGCTGTCAGACAAACCCCCCTCTATGATGAGGA
rJMFF031P20+ CCAATACCAGCTGTCAGACAAACCCCCCTCTATGATGAGGA
rJMFF010B07+ CCAGCTGTCAGACAAACCCCCCTCTATGATGAGGA
                      ____________________________________________________________
consensus ATTGTGGGAAACCTCAAAACCAATACCAGCTGTCAGACAAACCCCCCTCTATGATGAGGA
 
. : . : . : . : . : . :
rJMSF014D06+ TTTGGCTATGGAAGGTATTCTGGATGCCTTAGAAGATATCTCGCCATCCATGCTGTTTGA
rJMFF031P20+ TTTGGCTGTGGAAGGTATTCTGGATGCCTTAGAAGATATCTCGCCATCCATGCTGTTTGA
rJMFF010B07+ TTTGGCTGTGGAAGGTATTCTGGATGCCTTAGAAGATATCTCGCCATCCATGCTGTTTGA
                      ____________________________________________________________
consensus TTTGGCTGTGGAAGGTATTCTGGATGCCTTAGAAGATATCTCGCCATCCATGCTGTTTGA
 
. : . : . : . : . : . :
rJMSF014D06+ ACAACTATTTATATCCCTTGTCGGTTCAGGATTTGTGATTGCTGAGTCAACCCTCTCCCC
rJMFF031P20+ ACAACTATTTATATCCCTTGTCGGTTCAGGATTTGTGATTGCTGAGTCAACCCTCTCCCC
rJMFF010B07+ ACAACTATTTATATCCCTTGTCGGTTCAGGATTTGTGATTGCTGAGTCAACCCTCTCCCC
                      ____________________________________________________________
consensus ACAACTATTTATATCCCTTGTCGGTTCAGGATTTGTGATTGCTGAGTCAACCCTCTCCCC
 
. : . : . : . : . : . :
rJMSF014D06+ CAATCCCAGCATGTCAGGGCTGTTTTTTGAGTGCAAAGATTACACAATTTTAATATGCCA
rJMFF031P20+ CAATCCCAGCATGTCAGGGCTGTTTTTTGAGTGCAAAGATTACACAATTTTAATATGCCA
rJMFF010B07+ CAATCCCAGCATGTCAGGGCTGTTTTTTGAGTGCAAAGATTACACAATTTTAATATGCCA
                      ____________________________________________________________
consensus CAATCCCAGCATGTCAGGGCTGTTTTTTGAGTGCAAAGATTACACAATTTTAATATGCCA
 
. : . : . : . : . : . :
rJMSF014D06+ AAACAGCGCATGGGTTAAGAAAGTTGATGACATATGTCAGGTGTATGAAACGGTGGAGAC
rJMFF031P20+ AAACAGCGCATGGGTTAAGAAAGTTGATGACATATGTCAGGTGTATGAAACGGTGGAGAC
rJMFF010B07+ AAACAGCGCATGGGTTAAGAAAGTTGATGACATATGTCAGGTGTATGAAACGGTGGAGAC
                      ____________________________________________________________
consensus AAACAGCGCATGGGTTAAGAAAGTTGATGACATATGTCAGGTGTATGAAACGGTGGAGAC
 
. : . : . : . : . : . :
rJMSF014D06+ GATGGTACTTAGCCCGGATGGAGTTGGTAAATTCGCAGTTCAGAATGAAGAGAACACTCC
rJMFF031P20+ GATGGTACTTAGCCCGGATGGAGTTGGTAAATTCGCAGTTCAGAATGAAGAGAACACTCC
rJMFF010B07+ GATGGTACTTAGCCCGGATGGAGTTGGTAAATTCGCAGTTCAGAATGAAGAGAACACTCC
                      ____________________________________________________________
consensus GATGGTACTTAGCCCGGATGGAGTTGGTAAATTCGCAGTTCAGAATGAAGAGAACACTCC
 
. : . : . : . : . : . :
rJMSF014D06+ TGTGAGTGAACTGAAAAGCCGCTTCAAGAGACTAGGGTCGTCGGTGTTTGGCAGGGATAA
rJMFF031P20+ TGTGAGTGAACTGAAAAGCCGCTTCAAGAGACTAGGGTCGTCGGTGTTTGGCAGGGATAA
rJMFF010B07+ TGTGAGTGAACTGAAAAGCCGCTTCAAGAGACTAGGGTCGTCGGTGTTTGGCAGGGATAA
                      ____________________________________________________________
consensus TGTGAGTGAACTGAAAAGCCGCTTCAAGAGACTAGGGTCGTCGGTGTTTGGCAGGGATAA
 
. : . : . : . : . : . :
rJMSF014D06+ GAATTCAGGAAAAGGATCCCCAACAAACTCAGAGGAGAACCTTATAAAGCAATCAATCTC
rJMFF031P20+ GAATTCAGGAAAAGGATCCCCAACAAACTCAGAGGAGAACCTTATAAAGCAATCAATCTC
rJMFF010B07+ GAATTCAGGAAAAGGATCCCCAACAAACTCAGAGGAGAACCTTATAAAGCAATCAATCTC
                      ____________________________________________________________
consensus GAATTCAGGAAAAGGATCCCCAACAAACTCAGAGGAGAACCTTATAAAGCAATCAATCTC
 
. : . : . : . : . : . :
rJMSF014D06+ ATCCATATTCTCAAAGAAGCCACCTAAACACAGCAGCACAAATCCGGGTGATAATAAGTT
rJMFF031P20+ ATCCATATTCTCAAAGAAGCCACCTAAACACAGCAGCACAAATCCGGGTGATAATAAGTT
rJMFF010B07+ ATCCATATTCTCAAAGAAGCCACCTAAACACAGCAGCACAAATCCGGGTGATAATAAGTT
                      ____________________________________________________________
consensus ATCCATATTCTCAAAGAAGCCACCTAAACACAGCAGCACAAATCCGGGTGATAATAAGTT
 
. : . : . : . : . : . :
rJMSF014D06+ TTCCAGTCCTGTTGATAATGACTGGACTATTGTATAACAAACACCCTTCTCATCCAAAGG
rJMFF031P20+ TTCCAGTCCTGTTGATAATGACTGGACTATTGTATAACAAACACCCTTCTCATCCAAAGG
rJMFF010B07+ TTCCAGTCCTGTTGATAATGACTGGACTATTGTATAACAAACACCCTTCTCATCCAAAGG
                      ____________________________________________________________
consensus TTCCAGTCCTGTTGATAATGACTGGACTATTGTATAACAAACACCCTTCTCATCCAAAGG
 
. : . : . : . : . : . :
rJMSF014D06+ TGCAACTGTAAATTTATTT
rJMFF031P20+ TGCAACTGTAAATTTATTTGTGTGAACTATGAACCAGTAAAAGCAATACCAAAATCA
rJMFF010B07+ TGCAACTGTAAATTTATTTGTGTGAACTATGAACCAGTAAAAGCAATACCAAAATCATAG
                      ____________________________________________________________
consensus TGCAACTGTAAATTTATTTGTGTGAACTATGAACCAGTAAAAGCAATACCAAAATCATAG