Contig 005351:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008L08Sequence578010580 (7)ref|XP_006357223.1|2e-57PREDICTED: probable inactive receptor kinase At1g27190-like [Solanum tuberosum]684005351 (8)ref|XP_009602624.1|3e-69PREDICTED: probable inactive receptor kinase At1g27190 [Nicotiana tomentosiform
JMFF015J16Sequence561010580 (7)ref|XP_006357223.1|9e-54PREDICTED: probable inactive receptor kinase At1g27190-like [Solanum tuberosum]753005351 (8)ref|XP_009602624.1|4e-90PREDICTED: probable inactive receptor kinase At1g27190 [Nicotiana tomentosiform
JMFS130G08Sequence629005351 (8)ref|XP_009799074.1|6e-113PREDICTED: probable inactive receptor kinase At1g27190 [Nicotiana sylvestris]
JMSF005B13Sequence262010580 (7)ref|XP_006357223.1|1e-06PREDICTED: probable inactive receptor kinase At1g27190-like [Solanum tuberosum]269005351 (8)
JMSF007E21Sequence343010580 (7)ref|XP_006357223.1|6e-15PREDICTED: probable inactive receptor kinase At1g27190-like [Solanum tuberosum]796005351 (8)ref|XP_009602624.1|1e-108PREDICTED: probable inactive receptor kinase At1g27190 [Nicotiana tomentosiform
JMSF011F21Sequence341010580 (7)ref|XP_006357223.1|3e-14PREDICTED: probable inactive receptor kinase At1g27190-like [Solanum tuberosum]804005351 (8)ref|XP_009602624.1|2e-108PREDICTED: probable inactive receptor kinase At1g27190 [Nicotiana tomentosiform
JMSF037B22Sequence694010580 (7)ref|XP_006357223.1|4e-79PREDICTED: probable inactive receptor kinase At1g27190-like [Solanum tuberosum]607005351 (8)ref|XP_009602624.1|4e-62PREDICTED: probable inactive receptor kinase At1g27190 [Nicotiana tomentosiform
JMSF040J02Sequence654010580 (7)ref|XP_006357223.1|3e-69PREDICTED: probable inactive receptor kinase At1g27190-like [Solanum tuberosum]836005351 (8)ref|XP_009602624.1|5e-111PREDICTED: probable inactive receptor kinase At1g27190 [Nicotiana tomentosiform

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS130G08- GTTTGGTTGAGAATGAGAAGCTTTTGGTGTATAAGCATATGCCTAATGGTAG
                      ____________________________________________________________
consensus GTTTGGTTGAGAATGAGAAGCTTTTGGTGTATAAGCATATGCCTAATGGTAG
 
. : . : . : . : . : . :
JMFS130G08- CTTATATTCGGCTTTGCACGGGAGCCTTTGTACTGGTGTTAGGAACAATAGATATGAGCT
rJMSF040J02+ GTTAGGAACAATAGATATGAGCT
                      ____________________________________________________________
consensus CTTATATTCGGCTTTGCACGGGAGCCTTTGTACTGGTGTTAGGAACAATAGATATGAGCT
 
. : . : . : . : . : . :
JMFS130G08- TGG-TTGGCAATCTAGGCTTAGGATAGCTGTTGGTGCAGCAAGAGGGCTTGCTTGGCTGC
rJMSF040J02+ TGGTTTGGCAATNTAGGCTTAGGATAGCTGTTGGTGCAGCAAGAGGGCTTGCTTGGCTGC
rJMSF007E21+ CTTAGGATAGCTGTTGGTGCAGCAAGAGGGCTTGCTTGGCTGC
rJMSF011F21+ CTTAGGATAGCTGTTGGTGCAGCCAGAGGGCTTGCTTGGCTGC
                      ____________________________________________________________
consensus TGGTTTGGCAATCTAGGCTTAGGATAGCTGTTGGTGCAGCAAGAGGGCTTGCTTGGCTGC
 
. : . : . : . : . : . :
JMFS130G08- ATCATGGCTGCCAACCGCCCTATTTGCATCAATACATTAGCTCGAATGTGATTCTAGTGG
rJMSF040J02+ ATCATGGCTGCCAACCGCCCTATTTGCATCAATACATTAGCTCGAATGTGATTCTAGTGG
rJMSF007E21+ ATCATGGCTGCCAACCGCCCTATTTGCATCAATACATTAGCTCGAATGTGATTCTAGTGG
rJMSF011F21+ ATCATGGCTGCCAACCGCCCTATTTGCATCAATACATTAGCTCGAATGTGATTCTAGTGG
rJMFF015J16+ GCATCAATACATTAGCTCGAATGTGATTCTAGTGG
                      ____________________________________________________________
consensus ATCATGGCTGCCAACCGCCCTATTTGCATCAATACATTAGCTCGAATGTGATTCTAGTGG
 
. : . : . : . : . : . :
JMFS130G08- ACGATGATCTTGATGCTAGGATAACTGATTTTGGCCTTGCCAGGCTCGTTAAATCAGCTG
rJMSF040J02+ ACGATGATCTTGATGCTAGGATAACTGATTTTGGCCTTGCCAGGCTCGTTAAATCAGCTG
rJMSF007E21+ ACGATGATCTTGATGCTAGGATAACTGATTTTGGCCTTGCCAGGCTCGTTAAATCAGCTG
rJMSF011F21+ ACGATGATCTTGATGCTAGGATAACTGATTTTGGCCTTGCCAGGCTCGTTAAATCAGCTG
rJMFF015J16+ ACGATGATCTTGATGCTAGGATAACTGATTTTGGCCTTGCCAGGCTCGTTAAATCAGCTG
rJMFF008L08+ CTTGCCAGGCTCGTTAAATCAGCTG
                      ____________________________________________________________
consensus ACGATGATCTTGATGCTAGGATAACTGATTTTGGCCTTGCCAGGCTCGTTAAATCAGCTG
 
. : . : . : . : . : . :
JMFS130G08- ACT-CCAATGATGGTTCTTTTGTCAATGGCGGTCTTGGGGAATTCGGGTATGTTGCTCCT
rJMSF040J02+ ACT-CCAATGATGGTTCTTTTGTCAATGGCGGTCTTGGGGAATTCGGGTATGTTGCTCCT
rJMSF007E21+ ACT-CCAATGATGGTTCTTTTGTCAATGGCGGTCTTGGGGAATTCGGGTATGTTGCTCCT
rJMSF011F21+ ACT-CCAATGATGGTTCTTTTGTCAATGGCGGTCTTGGGGAATTCGGGTATGTTGCTCCT
rJMSF037B22+ ATTCGGGTATGTTGCTCCT
rJMFF015J16+ ACT-CCAATGATGGTTCTTTTGTCAATGGCGGTCTTGGGGAATTCGGGTATGTTGCTCCT
rJMFF008L08+ ACTCCCAATGATGGTTCTTTTGTCAATGGCGGTCTTGGGGAATTCGGGTATGTTGCTCCT
                      ____________________________________________________________
consensus ACT-CCAATGATGGTTCTTTTGTCAATGGCGGTCTTGGGGAATTCGGGTATGTTGCTCCT
 
. : . : . : . : . : . :
JMFS130G08- GAATACTCGAGCACTCTGGTTGCATCGACAAAAGGAGATGTCTATAGTTTTGGGGTTGTG
rJMSF040J02+ GAATACTCGAGCACTCTGGTTGCATCGACAAAAGGAGATGTCTATAGTTTTGGGGTTGTG
rJMSF007E21+ GAATACTCGAGCACTCTGGTTGCATCGACAAAAGGAGATGTCTATAGTTTTGGGGTTGTG
rJMSF011F21+ GAATACTCGAGCACTCTGGTTGCATCGACAAAAGGAGATGTCTATAGTTTTGGGGTTGTG
rJMSF037B22+ GAATACTCGAGCACTCTGGTTGCATCGACAAAAGGAGATGTCTATAGTTTTGGGGTTGTG
rJMFF015J16+ GAATACTCGAGCACTCTGGTTGCATCGACAAAAGGAGATGTCTATAGTTTTGGGGTTGTG
rJMFF008L08+ GAATACTCGAGCACTCTGGTTGCATCGACAAAAGGAGATGTCTATAGTTTTGGGGTTGTG
                      ____________________________________________________________
consensus GAATACTCGAGCACTCTGGTTGCATCGACAAAAGGAGATGTCTATAGTTTTGGGGTTGTG
 
. : . : . : . : . : . :
JMFS130G08- CTGCTGGAGCTGGTGAGTGGGCAGAAGCCTCTTGGAGCAGGCAATGCACAGGAAGGGTTC
rJMSF040J02+ CTGCTGGAGCTGGTGAGTGGGCAGAAGCCTCTTGGAGCAGGCAATGCACAGGAAGGGTTC
rJMSF007E21+ CTGCTGGAGCTGGTGAGTGGGCAGAAGCCTCTTGGAGCAGGCAATGCACAGGAAGGGTTC
rJMSF011F21+ CTGCTGGAGCTGGTGAGTGGGCAGAAGCCTCTTGGAGCAGGCAATGCACAGGAAGGGTTC
rJMSF037B22+ CTGCTGGAGCTGGTGAGTGGGCAGAAGCCTCTTGGAGCAGGCAATGCACAGGAAGGGTTC
rJMFF015J16+ CTGCTGGAGCTGGTGAGTGGGCAGAAGCCTCTTGGAGCAGGCAATGCACAGGAAGGGTTC
rJMFF008L08+ CTGCTGGAGCTGGTGAGTGGGCAGAAGCCTCTTGGAGCAGGCAATGCACAGGAAGGGTTC
                      ____________________________________________________________
consensus CTGCTGGAGCTGGTGAGTGGGCAGAAGCCTCTTGGAGCAGGCAATGCACAGGAAGGGTTC
 
. : . : . : . : . : . :
JMFS130G08- AAGGGGAGCCTAGTGGATTGGGTTAGTCATCTCTTAGTCTCGGGCCGAAGTAGGGATGCC
rJMSF040J02+ AAGGGGAGCCTAGTGGATTGGGTTAGTCATCTCTTAGTCTCGGGCCGAAGTAGGGATGCC
rJMSF007E21+ AAGGGGAGCCTAGTGGATTGGGTTAGTCATCTCTTAGTCTCGGGCCGAAGTAGGGATGCC
rJMSF011F21+ AAGGGGAGCCTAGTGGATTGGGTTAGTCATCTCTTAGTCTCGGGCCGAAGTAGGGATGCC
rJMSF037B22+ AAGGGGAGCCTAGTGGATTGGGTTAGTCATCTCTTAGTCTCGGGCCGAAGTAGGGATGCC
rJMFF015J16+ AAGGGGAGCCTAGTGGATTGGGTTAGTCATCTCTTAGTCTCGGGCCGAAGTAGGGATGCC
rJMFF008L08+ AAGGGGAGCCTAGTGGATTGGGTTAGTCATCTCTTAGTCTCGGGCCGAAGTAGGGATGCC
                      ____________________________________________________________
consensus AAGGGGAGCCTAGTGGATTGGGTTAGTCATCTCTTAGTCTCGGGCCGAAGTAGGGATGCC
 
. : . : . : . : . : . :
JMFS130G08- ATAGACAAACACCTTGTTGGGGGAGGACAGGAAGATGAAATCATGCAGGTTTTGAGGATT
rJMSF040J02+ ATAGACAAACACCTTGTTGGGGGAGGACAGGAAGATGAAATCATGCAGGTTTTGAGGATT
rJMSF007E21+ ATAGACAAACACCTTGTTGGGGGAGGACAGGAAGATGAAATCATGCAGGTTTTGAGGATT
rJMSF011F21+ ATAGACAAACACCTTGTTGGGGGAGGACAGGAAGATGAAATCATGCAGGTTTTGAGGATT
rJMSF037B22+ ATAGACAAACACCTTGTTGGGGGAGGACAGGAAGATGAAATCATGCAGGTTTTGAGGATT
rJMFF015J16+ ATAGACAAACACCTTGTTGGGGGAGGACAGGAAGATGAAATCATGCAGGTTTTGAGGATT
rJMFF008L08+ ATAGACAAACACCTTGTTGGGGGAGGACAGGAAGATGAAATCATGCAGGTTTTGAGGATT
                      ____________________________________________________________
consensus ATAGACAAACACCTTGTTGGGGGAGGACAGGAAGATGAAATCATGCAGGTTTTGAGGATT
 
. : . : . : . : . : . :
JMFS130G08- GCTTGCTCCTGTGTAGCTCCAAGACCAAAGGATAGGCCT
rJMSF040J02+ GCTTGCTCCTGTGTAGCTCCAAGACCAAAGGATAGGCCTTCTATGTACACTGTTTACCAG
rJMSF005B13+ AG
rJMSF007E21+ GCTTGCTCCTGTGTAGCTCCAAGACCAAAGGATAGGCCTTCTATGTACACTGTTTACCAG
rJMSF011F21+ GCTTGCTCCTGTGTAGCTCCAAGACCAAAGGATAGGCCTTCTATGTACACTGTTTACCAG
rJMSF037B22+ GCTTGCTCCTGTGTAGCTCCAAGACCAAAGGATAGGCCTTCTATGTACACTGTTTACCAG
rJMFF015J16+ GCTTGCTCCTGTGTAGCTCCAAGACCAAAGGATAGGCCTTCTATGTACACTGTTTACCAG
rJMFF008L08+ GCTTGCTCCTGTGTAGCTCCAAGACCAAAGGATAGGCCTTCTATGTACACTGTTTACCAG
                      ____________________________________________________________
consensus GCTTGCTCCTGTGTAGCTCCAAGACCAAAGGATAGGCCTTCTATGTACACTGTTTACCAG
 
. : . : . : . : . : . :
rJMSF040J02+ TCCTTGAAGACCATGGCTGACAAACATGGTCTCTCTGAACAATTTGATCATGAGTTTCCA
rJMSF005B13+ TCNTTGAAGACCATGGGTGACAAACATGGTCTCTCTGANCAANTTGATCATGAGTNTCCA
rJMSF007E21+ TCCTTGAAGACCATGGCTGACAAACATGGTCTCTCTGAACAATTTGATCATGAGTTTCCA
rJMSF011F21+ TCCTTGAAGACCATGGCTGACAAACATGGTCTCTCTGAACAATTTGATCATGAGTTTCCA
rJMSF037B22+ TCCTTGAAGACCATGGCTGACAAACATGGTCTCTCTGAACAATTTGATCATGAGTTTCCA
rJMFF015J16+ TCCTTGAAGACCATGGCTGACAAACATGGTCTCTCTGAACAATTTGATCATGAGTTTCCA
rJMFF008L08+ TCCTTGAAGACCATGGCTGACAAACATGGTCTCTCTGAACAATTTGATCATGAGTTTCCA
                      ____________________________________________________________
consensus TCCTTGAAGACCATGGCTGACAAACATGGTCTCTCTGAACAATTTGATCATGAGTTTCCA
 
. : . : . : . : . : . :
rJMSF040J02+ ATGAACTTTGGAAAACAAGATGACAATCCAAAGGACTAGATTGCTCCTGCAACCAAAGAT
rJMSF005B13+ ATGAACTTTGGAAAACAAGATGACAATCCAAAGGACTAGATTGCTCCNGCAACCAAAGAT
rJMSF007E21+ ATGAACTTTGGAAAACAAGATGACAATCCAAAGGACTAGATTGCTCCTGCAACCAAAGAT
rJMSF011F21+ ATGAACTTTGGAAAACAAGATGACAATCCAAAGGACTAGATTGCTCCTGCAACCAAAGAT
rJMSF037B22+ ATGAACTTTGGAAAACAAGATGACAATCCAAAGGACTAGATTGCTCCTGCAACCAAAGAT
rJMFF015J16+ ATGAACTTTGGAAAACAAGATGACAATCCAAAGGACTAGATTGCTCCTGCAACCAAAGAT
rJMFF008L08+ ATGAACTTTGGAAAACAAGATGACAATCCAAAGGACTAGATTGCTCCTGCAACCAAAGAT
                      ____________________________________________________________
consensus ATGAACTTTGGAAAACAAGATGACAATCCAAAGGACTAGATTGCTCCTGCAACCAAAGAT
 
. : . : . : . : . : . :
rJMSF040J02+ TAAGCATCATCATATTGTCTCTTATCAGATGAACCTCAATTATTATGATGCCATGTTACC
rJMSF005B13+ TAAGCATCATCATATTGTNTCTTATCAGATGAACCTCAATTATTATGATGCCATGTTACC
rJMSF007E21+ TAAGCATCATCATATTGTCTCTTATCAGATGAACCTCAATTATTATGATGCCATGTTACC
rJMSF011F21+ TAAGCATCATCATATTGTCTCTTATCAGATGAACCTCAATTATTATGATGCCATGTTACC
rJMSF037B22+ TAAGCATCATCATATTGTCTCTTATCAGATGAACCTCAATTATTATGATGCCATGTTACC
rJMFF015J16+ TAAGCATCATCATATTGTCTCTTATCAGATGAACCTCAATTATTATGATGCCATGTTACC
rJMFF008L08+ TAAGCATCATCATATTGTCTCTTATCAGATGAACCTCAATTATTATGATGCCATGTTACC
                      ____________________________________________________________
consensus TAAGCATCATCATATTGTCTCTTATCAGATGAACCTCAATTATTATGATGCCATGTTACC
 
. : . : . : . : . : . :
rJMSF040J02+ CAAACCTTTCTACTGCCAAGAGGTAATTCTCCTTTCTATTGTCCATCAAATTGTTGA-CT
rJMSF005B13+ CAAACCTTTCTACTGCCAAGAGGTAATTCTCCTTTCTATTGTCCATCAAATTGTTGAGCT
rJMSF007E21+ CAAACCTTTCTACTGCCAAGAGGTAATTCTCCTTTCTATTGTCCATCAAATTGTTGA-CT
rJMSF011F21+ CAAACCTTTCTACTGCCAAGAGGTAATTCTCCTTTCTATTGTCCATCAAATTGTTGA-CT
rJMSF037B22+ CAAACCTTTCTACTGCCAAGAGGTAATTCTCCTTTCTATTGTCCATCAAATTGTTGA-CT
rJMFF015J16+ CAAACCTTTCTACTGCCGAGAGGTAATTCTCCTTTCTATTGTCCATCAAATTGTTGA-CT
rJMFF008L08+ CAAACCTTTCTACTGCCGAGAGGTAATTCTCCTTTCTATTGTCCATCAAATTGTTGA-CT
                      ____________________________________________________________
consensus CAAACCTTTCTACTGCCAAGAGGTAATTCTCCTTTCTATTGTCCATCAAATTGTTGA-CT
 
. : . : . : . : . : . :
rJMSF040J02+ ATGTATACTAGAAAATCAAAAGCTCAATGGCATCC
rJMSF005B13+ ATGTATACTAGAAAATCAAAAGCTCAA
rJMSF007E21+ ATGTATACTAGAAAATCAAAAGCTCAATGGCATCC
rJMSF011F21+ ATGTATACTAGAAAATCAAAAGCTCAATGGCATCC
rJMSF037B22+ ATGTATACTAGAAAATCAAAAGCTCAATGGCATCC
rJMFF015J16+ ATGTATACTAGAAAATCAAAAGCTCAATGGCATCCTGGCATCTGGTTTCT
rJMFF008L08+ ATGTATACTAGAAAATCAAAAGCTCAATGGCATCCTGGCATCTGGTTTCTTGACAGAAAT
                      ____________________________________________________________
consensus ATGTATACTAGAAAATCAAAAGCTCAATGGCATCCTGGCATCTGGTTTCTTGACAGAAAT