Contig 005347:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008H06Sequence584005347 (11)ref|XP_009763651.1|89.7PREDICTED: uncharacterized protein LOC104215531 [Nicotiana sylvestris]678005347 (11)ref|XP_009763651.1|95.9PREDICTED: uncharacterized protein LOC104215531 [Nicotiana sylvestris]
JMSF009J20Sequence298005347 (11)ref|XP_003633339.1|53.5PREDICTED: uncharacterized protein LOC100853006 [Vitis vinifera]576005347 (11)ref|XP_009763651.1|95.9PREDICTED: uncharacterized protein LOC104215531 [Nicotiana sylvestris]
JMSF010B10Sequence514005347 (11)ref|XP_009763651.1|95.5PREDICTED: uncharacterized protein LOC104215531 [Nicotiana sylvestris]
JMSF018K23Sequence299005347 (11)ref|XP_003633339.1|53.9PREDICTED: uncharacterized protein LOC100853006 [Vitis vinifera]
JMSF019J20Sequence302005347 (11)624005347 (11)ref|XP_009763651.1|95.9PREDICTED: uncharacterized protein LOC104215531 [Nicotiana sylvestris]
JMSF022E09Sequence657023187ref|XP_004235216.1|145PREDICTED: uncharacterized protein LOC101251760 [Solanum lycopersicum]620005347 (11)ref|XP_009763651.1|95.9PREDICTED: uncharacterized protein LOC104215531 [Nicotiana sylvestris]
JMSF025O08Sequence586005347 (11)ref|XP_009763651.1|89.7PREDICTED: uncharacterized protein LOC104215531 [Nicotiana sylvestris]619005347 (11)ref|XP_009763651.1|95.9PREDICTED: uncharacterized protein LOC104215531 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF009J20- GAACAGCTCCGACTGGGTGATCTCTACTGCTTCGAATCGGAACA
JMSF018K23- AACAGCTCCGACTGGGTGATCTCTACTGCTTCGAATCGGAACA
JMSF019J20- AACAGCTCCGACTGGGTGATCTCTACTGCTTCGAATCGGAACA
JMFF008H06- AACAGCTCCGACTGGGTGATCTCTACTGCTTCGAATCGGAACA
JMSF025O08- ACAGCTCCGACTGGGTGATCTCTACTGCTTCGAATCGGAACA
rJMSF025O08+ TCGGAACA
rJMSF022E09+ GGAACA
rJMSF019J20+ AATCGGAACA
rJMSF009J20+ CGGAACA
rJMFF008H06+ TACTGCTTCGAATCGGAACA
                      ____________________________________________________________
consensus GAACAGCTCCGACTGGGTGATCTCTACTGCTTCGAATCGGAACA
 
. : . : . : . : . : . :
JMSF009J20- ATCCTTGAAATTTGTAGAACAAGGCTTAAAGGAAAAG-AAAAAAAAAACCAGAACAATAT
JMSF018K23- ATCCTTGAAATTTGTAGAACAAGGCTTAAAGGAAAAG--AAAAAAAAACCAGAACAATAT
JMSF019J20- ATCCTTGAAATTTGTAGAACAAGGCTTAAAGGAAAAGAAAAAAAAAAACCAGAACAATAT
JMFF008H06- ATCCTTGAAATTTGTAGAACAAGGCTTAAAGGAAAAG-AAAAAAAAAACCAGAACAATAT
JMSF025O08- ATCCTTGAAATTTGTAGAACAAGGCTTAAAGGAAAAG-AAAAAAAAAACCAGAACAATAT
rJMSF025O08+ ATCCTTGAAATTTGTAGAACAAGGCTTAAAGGAAAAG-AAAAAAAAAACCAGAACAATAT
rJMSF022E09+ ATCCNTGAAATTTGTNGAACAAGGCTTAAAGGAAAAG-AAAAAAAAAACCAGAACAATAT
rJMSF010B10+ AAAAAAAAAACCAGAACAATAT
rJMSF019J20+ ATCCTTGAAATTTGTAGAACAAGGCTTAAAGGAAAAGAAAAAAAAAAACCAGAACAATAT
rJMSF009J20+ ATCCTTGAAATTTGTAGAACAAGGCTTAAAGGAAAAG-AAAAAAAAAACCAGAACAATAT
rJMFF008H06+ ATCCTTGAAATTTGTAGAACAAGGCTTAAAGGAAAAG-AAAAAAAAAACCAGAACAATAT
                      ____________________________________________________________
consensus ATCCTTGAAATTTGTAGAACAAGGCTTAAAGGAAAAG-AAAAAAAAAACCAGAACAATAT
 
. : . : . : . : . : . :
JMSF009J20- GAGTTTGAACCGTGTTTGGGTGGCGGCGGGTGTCGCCTTCGTTAATAACCACTCCGATCA
JMSF018K23- GAGTTTGAACCGTGTTTGGGTGGCGGCGGGTGTCGCCTTCGTTAATAACCACTCCGATCA
JMSF019J20- GAGTTTGAACCGNGTTTGGGTGGCGGCGGGTGTCNCCTTCGTTAATAACCNCTCCGATCA
JMFF008H06- GAGTTTGAACCGTGTTTGGGTGGCGGCGGGTGTCGCCTTCGTTAATAACCACTCCGATCA
JMSF025O08- GAGTTTGAACCGTGTTTGGGTGGCGGCGGGTGTCGCCTTCGTTAATAACCACTCCGATCA
rJMSF025O08+ GAGTTTGAACCGTGTTTGGGTGGCGGCGGGTGTCGCCTTCGTTAATAACCACTCCGATCA
rJMSF022E09+ GAGTTTGAACCGTGTTTGGGTGGCGGCGGGTGTCGCCTTCGTTAATAACCACTCCGATCA
rJMSF010B10+ GAGTTTGAACCGTGTTTGGGTGGCGGCGGGTGTCGCCTTCGTTAATAACCACTCCGATCA
rJMSF019J20+ GAGTTTGAACCGTGTTTGGGTGGCGGCGGGTGTCGCCTTCGTTAATAACCACTCCGATCA
rJMSF009J20+ GAGTTTGAACCGTGTTTGGGTGGCGGCGGGTGTCGCCTTCGTTAATAACCACTCCGATCA
rJMFF008H06+ GAGTTTGAACCGTGTTTGGGTGGCGGCGGGTGTCGCCTTCGTTAATAACCACTCCGATCA
                      ____________________________________________________________
consensus GAGTTTGAACCGTGTTTGGGTGGCGGCGGGTGTCGCCTTCGTTAATAACCACTCCGATCA
 
. : . : . : . : . : . :
JMSF009J20- AGGTCANAAACTGAAGTCTGGCCTCAGATCCCTTCAGCAAACCAAAAAATGCTTTTCTTC
JMSF018K23- AGGTCAGAAACTGAAGTCTGGCCTCAGATCCCTTCAGCAAACCAAAAAATGCTTTTCTTC
JMSF019J20- AGGTCANAAACTGAAGTCTGGCCTCANATCCCTTCAGCAAACCAAAAAANGCTTTTCTTC
JMFF008H06- AGGTCANAAACTGAAGTCTGGCCTCANATCCCTTCAGCAAACCAAAAAATGCTTTTCTTC
JMSF025O08- AGGTCANAAACTGAAGTCTGGCCTCANATCCCTTCAGCAAACCAAAAAATGCTTTTCTTC
rJMSF025O08+ AGGTCAGAAACTGAAGTCTGGCCTCAGATCCCTTCAGCAAACCAAAAAATGCTTTTCTTC
rJMSF022E09+ AGGTCAGAAACTGAAGTCTGGCCTCAGATCCCTTCAGCAAACCAAAAAATGCTTTTCTTC
rJMSF010B10+ AGGTCAGAAACTGAAGTCTGGCCTCAGATCCCTTCAGCAAACCAAAAAATGCTTTTCTTC
rJMSF019J20+ AGGTCAGAAACTGAAGTCTGGCCTCAGATCCCTTCAGCAAACCAAAAAATGCTTTTCTTC
rJMSF009J20+ AGGTCAGAAACTGAAGTCTGGCCTCAGATCCCTTCAGCAAACCAAAAAATGCTTTTCTTC
rJMFF008H06+ AGGTCAGAAACTGAAGTCTGGCCTCAGATCCCTTCAGCAAACCAAAAAATGCTTTTCTTC
                      ____________________________________________________________
consensus AGGTCAGAAACTGAAGTCTGGCCTCAGATCCCTTCAGCAAACCAAAAAATGCTTTTCTTC
 
. : . : . : . : . : . :
JMSF009J20- TTCTTCTTCTTCTTCTTCTTCATCTTCCGCATCCGATCTCCGGCCTCTTTCCGGCTCCGA
JMSF018K23- TTCTTCTTCTTCTTCTTCTTCATCTTCCGCATCCGATCTCCGGCCTCTTTCCGGCTCCGA
JMSF019J20- TTCTTCTTCTTCTTCTTCTTCATCTTCCGCATCCNATCTCCGGCCTCTTTCCGGCTCCNA
JMFF008H06- TTCTTCTTCTTCTTCTTCTTCATCTTCCGCATCCGATCTCCGGCCTCTTTCCGGCTCCGA
JMSF025O08- TTCTTCTTCTTCTTCTTCTTCATCTTCCGCATCCGATCTCCGGCCTCTTTCCGGCTCCGA
rJMSF025O08+ TTCTTCTTCTTCTTCTTCTTCATCTTCCGCATCCGATCTCCGGCCTCTTTCCGGCTCCGA
rJMSF022E09+ TTNTTCTTCTTCTTCTTCTTCATCTTCCGCATCCGATCTCCGGCCTCTTTCCGGCTCCGA
rJMSF010B10+ TTCTTCTTCTTCTTCTTCTTCATCTTCCGCATCCGATCTCCGGCCTCTTTCCGGCTCCGA
rJMSF019J20+ TTCTTCTTCTTCTTCTTCTTCATCTTCCGCATCCGATCTCCGGCCTCTTTCCGGCTCCGA
rJMSF009J20+ TTCTTCTTCTTCTTCTTCTTCATCTTCCGCATCCGATCTCCGGCCTCTTTCCGGCTCCGA
rJMFF008H06+ TTCTTCTTCTTCTTCTTCTTCATCTTCCGCATCCGATCTCCGGCCTCTTTCCGGCTCCGA
                      ____________________________________________________________
consensus TTCTTCTTCTTCTTCTTCTTCATCTTCCGCATCCGATCTCCGGCCTCTTTCCGGCTCCGA
 
. : . : . : . : . : . :
JMSF009J20- TCTTGGAGGGTTCGT
JMSF018K23- TCTTGGAGGGTTCGTCG
JMSF019J20- TCTTGGAGGGTTCGTCGG
JMFF008H06- TCTTGGAGGGTTCGTCGGAAGCGGGAGCGGANAGGAGCGGATTAGGCAGGCCGATGACTC
JMSF025O08- TCTTGGAGGGTTCGTCGGAAGCGGGAGCGGANAGGAGCGGATTAGGCAGGCCGATGACTC
rJMSF025O08+ TCTTGGAGGGTTCGTCGGAAGCGGGAGCGGAGAGGAGCGGATTAGGCAGGCCGATGACTC
rJMSF022E09+ TCTTGGAGGGTTCGTCGGAAGCGGGAGCGGAGAGGAGCGGATTAGGCAGGCCGATGACTC
rJMSF010B10+ TCTTGGAGGGTTCGTCGGAAGCGGGAGCGGAGAGGAGCGGATTAGGCAGGCCGATGACTC
rJMSF019J20+ TCTTGGAGGGTTCGTCGGAAGCGGGAGCGGAGAGGAGCGGATTAGGCAGGCCGATGACTC
rJMSF009J20+ TCTTGGAGGGTTCGTCGGAAGCGGGAGCGGAGAGGAGCGGATTAGGCAGGCCGATGACTC
rJMFF008H06+ TCTTGGAGGGTTCGTCGGAAGCGGGAGCGGAGAGGAGCGGATTAGGCAGGCCGATGACTC
                      ____________________________________________________________
consensus TCTTGGAGGGTTCGTCGGAAGCGGGAGCGGAGAGGAGCGGATTAGGCAGGCCGATGACTC
 
. : . : . : . : . : . :
JMFF008H06- GCTCAGGCAAGTCATGTACTTCAACTGTTGGGGACAGGGTTAACGAGGCGCGGCGTTTCC
JMSF025O08- GCTCAGGCAAGTCATGTACTTCAACTGTTGGGGACAGGGTTAACGAGGCGCGGCGTTTCC
rJMSF025O08+ GCTCAGGCAAGTCATGTACTTCAACTGTTGGGGACAGGGTTAACGAGGCGCGGCGTTTCC
rJMSF022E09+ GCTCAGGCAAGTCATGTACTTCAACTGTTGGGGACAGGGTTAACGAGGCGCGGCGTTTCC
rJMSF010B10+ GCTCAGGCAAGTCATGTACTTCAACTGTTGGGGACAGGGTTAACGAGGCGCGGCGTTTCC
rJMSF019J20+ GCTCAGGCAAGTCATGTACTTCAACTGTTGGGGACAGGGTTAACGAGGCGCGGCGTTTCC
rJMSF009J20+ GCTCAGGCAAGTCATGTACTTCAACTGTTGGGGACAGGGTTAACGAGGCGCGGCGTTTCC
rJMFF008H06+ GCTCAGGCAAGTCATGTACTTCAACTGTTGGGGACAGGGTTAACGAGGCGCGGCGTTTCC
                      ____________________________________________________________
consensus GCTCAGGCAAGTCATGTACTTCAACTGTTGGGGACAGGGTTAACGAGGCGCGGCGTTTCC
 
. : . : . : . : . : . :
JMFF008H06- AGCCGCTATAAAACAACACAACGGAGTAGTTTGCCGTTGACCGGAACTTGTTACGGCGTT
JMSF025O08- AGCCGCTATAAAACAACACAACGGAGTAGTTTGCCGTTGACCGGAACTTGTTACGGCGTT
rJMSF025O08+ AGCCGCTATAAAACAACACAACGGAGTAGTTTGCCGTTGACCGGAACTTGTTACGGCGTT
rJMSF022E09+ AGCCGCTATAAAACAACACAACGGAGTAGTTTGCCGTTGACCGGAACTTGTTACGGCGTT
rJMSF010B10+ AGCCGCTATAAAACAACACAACGGAGTAGTTTGCCGTTGACCGGAACTTGTTACGGCGTT
rJMSF019J20+ AGCCGCTATAAAACAACACAACGGAGTAGTTTGCCGTTGACCGGAACTTGTTACGGCGTT
rJMSF009J20+ AGCCGCTATAAAACAACACAACGGAGTAGTTTGCCGTTGACCGGAACTTGTTACGGCGTT
rJMFF008H06+ AGCCGCTATAAAACAACACAACGGAGTAGTTTGCCGTTGACCGGAACTTGTTACGGCGTT
                      ____________________________________________________________
consensus AGCCGCTATAAAACAACACAACGGAGTAGTTTGCCGTTGACCGGAACTTGTTACGGCGTT
 
. : . : . : . : . : . :
JMFF008H06- GAAACATCGCCGGCGGTGGGTTGACCCGGACAGAGATGGCTGAAAATGAGCTGAGCCTAC
JMSF025O08- GAAACATCGCCGGCGGTGGGTTGACCCGGACAGAGATGGCTGAAAATGAGCTGAGCCTAC
rJMSF025O08+ GAAACATCGCCGGCGGTGGGTTGACCCGGACAGAGATGGCTGAAAATGAGCTGAGCCTAC
rJMSF022E09+ GAAACATCGCCGGCGGTGGGTTGACCCGGACAGAGATGGCTGAAAATGAGCTGAGCCTAC
rJMSF010B10+ GAAACATCGCCGGCGGTGGGTTGACCCGGACAGAGATGGCTGAAAATGAGCTGAGCCTAC
rJMSF019J20+ GAAACATCGCCGGCGGTGGGTTGACCCGGACAGAGATGGCTGAAAATGAGCTGAGCCTAC
rJMSF009J20+ GAAACATCGCCGGCGGTGGGTTGACCCGGACAGAGATGGCTGAAAATGAGCTGAGCCTAC
rJMFF008H06+ GAAACATCGCCGGCGGTGGGTTGACCCGGACAGAGATGGCTGAAAATGAGCTGAGCCTAC
                      ____________________________________________________________
consensus GAAACATCGCCGGCGGTGGGTTGACCCGGACAGAGATGGCTGAAAATGAGCTGAGCCTAC
 
. : . : . : . : . : . :
JMFF008H06- AGATCCGGGTGGGCAAAATCGTCAGTTTCTGGAATTGCAACGCTAAATGTAAATT-CCTT
JMSF025O08- AGATCCGGGTGGGCAAAATCGTCAGTTTCTGGAATTGCAACGCTAAATGTAAATT-CCTT
rJMSF025O08+ AGATCCGGGTGGGCAAAATCGTCAGTTTCTGGAATTGCAACGCTAAATGTAAATT-CCTT
rJMSF022E09+ AGATCCGGGTGGGCAAAATCGTCAGTTTCTGGAATTGCAACGCTAAATGTAAATT-CCTT
rJMSF010B10+ AGATCCGGGTGGGCAAAATCGTCAGTTTCTGGAATTGCAACGCTAAATGTAAATT-CCTT
rJMSF019J20+ AGATCCGGGTGGGCAAAATCGTCAGTTTCTGGAATTGCAACGCTAAATGTAAATT-CCTT
rJMSF009J20+ AGATCCGGGTGGGCAAAATCGTCAGTTTCTGGAATTGCAACGCTAAATGTAAATTCCCTT
rJMFF008H06+ AGATCCGGGTGGGCAAAATCGTCAGTTTCTGGAATTGCAACGCTAAATGTAAATT-CCTT
                      ____________________________________________________________
consensus AGATCCGGGTGGGCAAAATCGTCAGTTTCTGGAATTGCAACGCTAAATGTAAATT-CCTT
 
. : . : . : . : . : . :
JMFF008H06- GTA
JMSF025O08- GTAT
rJMSF025O08+ GTATAGTTTAGTAGAATGTATATATGTCTTTCTTTCTCAAATCAATGAACATAAAGCTAT
rJMSF022E09+ GTATAGTTTAGTAGAATGTATATATGTCTTTCTTTCTCAAATCAATGAACATAAAGCTAT
rJMSF010B10+ GTATAGTT
rJMSF019J20+ GTATAGTTTAGTAGAATGTATATATGTCTTTCTTTCTCAAATCAATGAACATAAAGCTAT
rJMSF009J20+ GTATAGTTTAGTAGAATGTATATATGTCTT
rJMFF008H06+ GTATAGTTTAGTAGAATGTATATATGTCTTTCTTTCTCAAATCAATGAACATAAAGCTAT
                      ____________________________________________________________
consensus GTATAGTTTAGTAGAATGTATATATGTCTTTCTTTCTCAAATCAATGAACATAAAGCTAT
 
. : . : . : . : . : . :
rJMSF025O08+ ACAAAATGATGGT
rJMSF022E09+ ACAAAATGATGGT
rJMSF019J20+ ACAAAATGATGGT
rJMFF008H06+ ACAAAATGATGGTTGTATCTTTTGTAGTGCATAATAATAATATGTTCTAATGACCAAATC
                      ____________________________________________________________
consensus ACAAAATGATGGTTGTATCTTTTGTAGTGCATAATAATAATATGTTCTAATGACCAAATC