Contig 005340:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006E20Sequence535005184 (3)ref|XP_006346471.1|2e-45PREDICTED: probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplastic-592005340 (2)ref|XP_002521834.1|6e-06N-acetyl-gamma-glutamyl-phosphate reductase, putative [Ricinus communis] gb|EEF
JMSF033A10Sequence601005184 (3)ref|XP_006346471.1|1e-63PREDICTED: probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplastic-464005340 (2)emb|CDP04582.1|8e-22unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF033A10+                                       GCNGAGATGNTATGAGAACGNAGAATTTGNG
                      ____________________________________________________________
consensus                                          GCNGAGATGNTATGAGAACGNAGAATTTGNG
 
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rJMSF033A10+          GTNTTGGTNAAGGNCAAAGNAGTTCNTCATTCCCGACATGTCCNGGGNTCCAANTNCNGC
                      ____________________________________________________________
consensus             GTNTTGGTNAAGGNCAAAGNAGTTCNTCATTCCCGACATGTCCNGGGNTCCAANTNCNGC
 
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rJMSF033A10+          CTCNTGAATGTNTTTCCTGNCCGAATTCCTGGGAGAGNNNTAATAATNTNTGTCATTGNT
                      ____________________________________________________________
consensus             CTCNTGAATGTNTTTCCTGNCCGAATTCCTGGGAGAGNNNTAATAATNTNTGTCATTGNT
 
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rJMSF033A10+          AATNTTNNGAAGGGAGCCTGNGGNCAAGCCTTGCAGAACCTCAACATNATGATGGGAATT
rJMFF006E20+                  GAAGGGAGCCTTTGGTCAAGCCTTGCAGAACCTNAACATAATGATGGGAATT
                      ____________________________________________________________
consensus             AATNTTNNGAAGGGAGCCTTTGGTCAAGCCTTGCAGAACCTCAACATAATGATGGGAATT
 
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rJMSF033A10+          CCNGAAAACCCAGGGCTCCTTNGCNNGCCCNTATTNCCTTGAATAATTTTCACCGTTTGN
rJMFF006E20+          CCAGAAAACNCAGGGCTCCTTTGCATGCCCTTATTTCCTTGAATAATTTTCNCCGTTTGN
                      ____________________________________________________________
consensus             CCAGAAAACCCAGGGCTCCTTTGCATGCCCTTATTTCCTTGAATAATTTTCACCGTTTGN
 
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rJMSF033A10+          CCATCCTCNTGGTGGTCAGCNTTCAAGTNTCGAGGTNACNCCCCTTGAGGAAGAAGGAAT
rJMFF006E20+          CCATCCTCATGGTGGTCAGCATTCAAGTNTNGAGGTAACNCCCCTTGAGGAAGAAGGAAT
                      ____________________________________________________________
consensus             CCATCCTCATGGTGGTCAGCATTCAAGTNTCGAGGTAACNCCCCTTGAGGAAGAAGGAAT
 
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rJMSF033A10+          GGCAATTATNTACGAGTNTNTAAGAATTTAAAAAGGGNGTTTTTTTNTTTAAAAAAAAAA
rJMFF006E20+          GGCAATTATNTTCGNGTATATAAGAATATAAAAAGGGNGTTTTTTTNTTTAAAAAAAAAA
                      ____________________________________________________________
consensus             GGCAATTATNTTCGAGTATATAAGAATTTAAAAAGGGNGTTTTTTTNTTTAAAAAAAAAA
 
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rJMSF033A10+          ACACTTGTNGAGCTGAATTGCATGAGTGAGCAGACTACGAAGTGTTGTTTGCAGGTATCT
rJMFF006E20+          ACACTTGTTGAGCTGAATTGCATGAGTGAGCAGACTATGAAGTGTTGTTTGCAGGTATTT
                      ____________________________________________________________
consensus             ACACTTGTTGAGCTGAATTGCATGAGTGAGCAGACTATGAAGTGTTGTTTGCAGGTATTT
 
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rJMSF033A10+          ATGCAGCATTCTC                                               
rJMFF006E20+          ATGCAGCATTCTCTCCTAGTACAACACAGATTGAGGCAAGCTTCCAGAAAGTTTTCTAGT
                      ____________________________________________________________
consensus             ATGCAGCATTCTCTCCTAGTACAACACAGATTGAGGCAAGCTTCCAGAAAGTTTTCTAGT
 
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rJMFF006E20+          ATTTGCCTAATGTTCTTGTCTTTCACTGTTGTCAAGTAGTTTTTCTTGATGCCATGGAGA
                      ____________________________________________________________
consensus             ATTTGCCTAATGTTCTTGTCTTTCACTGTTGTCAAGTAGTTTTTCTTGATGCCATGGAGA
 
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rJMFF006E20+          AGCTTTAAGGTTTTTGCTTCAGATTCTTTATGGATGTACTAAAGCAATCAATAATAAGCC
                      ____________________________________________________________
consensus             AGCTTTAAGGTTTTTGCTTCAGATTCTTTATGGATGTACTAAAGCAATCAATAATAAGCC
 
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rJMFF006E20+          TGTGTAGTAATACTAGGTTCTTTTAGTTATTATTACCTTTTAAAAAAATGGTTTTCTCGG
                      ____________________________________________________________
consensus             TGTGTAGTAATACTAGGTTCTTTTAGTTATTATTACCTTTTAAAAAAATGGTTTTCTCGG
 
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rJMFF006E20+          TTAAAGATTCGGTAGTAAGTAGTAATATTAGACTCTGACTAATCTGTAGCCTAATTATCA
                      ____________________________________________________________
consensus             TTAAAGATTCGGTAGTAAGTAGTAATATTAGACTCTGACTAATCTGTAGCCTAATTATCA