Contig 005330:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002O23Sequence715005330 (5)ref|XP_004230535.1|3e-96PREDICTED: phosphatidylserine decarboxylase proenzyme 2 isoform X2 [Solanum lyc
JMFF005B15Sequence442008728 (2)760005330 (5)ref|XP_004230535.1|5e-115PREDICTED: phosphatidylserine decarboxylase proenzyme 2 isoform X2 [Solanum lyc
JMFF010I16Sequence586008728 (2)ref|XP_009787986.1|5e-27PREDICTED: phosphatidylserine decarboxylase proenzyme 2-like [Nicotiana sylvest775005330 (5)ref|XP_004230535.1|6e-110PREDICTED: phosphatidylserine decarboxylase proenzyme 2 isoform X2 [Solanum lyc
JMFF037K20Sequence716005330 (5)ref|XP_004230535.1|3e-98PREDICTED: phosphatidylserine decarboxylase proenzyme 2 isoform X2 [Solanum lyc
JMSF003I20Sequence314009894 (15)ref|XP_006361530.1|8e-30PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like isoform X1 [S725005330 (5)ref|XP_004230535.1|2e-113PREDICTED: phosphatidylserine decarboxylase proenzyme 2 isoform X2 [Solanum lyc

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF010I16+ G
                      ____________________________________________________________
consensus G
 
. : . : . : . : . : . :
rJMFF010I16+ GTGCAAGACCAATTGCCTGCCCCAGAACGCAATGATATCGCTGTCTGTGCAGNTGATAGC
                      ____________________________________________________________
consensus GTGCAAGACCAATTGCCTGCCCCAGAACGCAATGATATCGCTGTCTGTGCAGNTGATAGC
 
. : . : . : . : . : . :
rJMFF010I16+ CCGCACTATGGCATTCAACAATGTTACTGATGCTGCAAGATTTTGGATTAAGGGCCGAAA
rJMFF005B15+ CCGCACTATGGCATTCAACAATGTTACTGATGCTGCAAGATTTTGGATTAAGGGCCGAAA
rJMSF003I20+ CCGCACTATGGCATTCAACAATGTTACTGATGCTGCAAGATTTTGGATTAAGGGCCGAAA
rJMFF037K20+ GAAA
                      ____________________________________________________________
consensus CCGCACTATGGCATTCAACAATGTTACTGATGCTGCAAGATTTTGGATTAAGGGCCGAAA
 
. : . : . : . : . : . :
rJMFF010I16+ ATTTTCCATCCAAGGCCTTTTGGGGGATGAAGCATGCTCCAGTGCATTCGTTGATGGAAG
rJMFF005B15+ ATTTTCCATCCAAGGCCTTTTGGGGGATGAAGCATGCTCCAGTGCATTCGTTGATGGAAG
rJMSF003I20+ ATTTTCCATCCAAGGCCTTTTGGGGGATGAAGCATGCTCCAGTGCATTCGTTGATGGAAG
rJMFF037K20+ ATTTTCCATCCAAGNCCTTTTGGGGGATGAAGCATGCTCCAGTGCATTCGTTGATGGAAG
rJMFF002O23+ TCCATCCAAGCCNTTTTGGGGGATGAAGCATGCTCCAGTGCATTCGTTGATGGAAG
                      ____________________________________________________________
consensus ATTTTCCATCCAAGGCCTTTTGGGGGATGAAGCATGCTCCAGTGCATTCGTTGATGGAAG
 
. : . : . : . : . : . :
rJMFF010I16+ TTTGGTGATATTTAGGCTGGCACCCCAGGATTACCATCGTTTCCATCTTCCTGTCTCTGG
rJMFF005B15+ TTTGGTGATATTTAGGCTGGCACCCCAGGATTACCATCGTTTCCATCTTCCTGTCTCTGG
rJMSF003I20+ TTTGGTGATATTTAGGCTGGCACCCCAGGATTACCATCGTTTCCATCTTCCTGTCTCTGG
rJMFF037K20+ TTTGGTGATATTTAGGCTGGCACCCCAGGATTACCATCGTTTCCATCTTCCTGTCTCTGG
rJMFF002O23+ TTTGGTGATATTTAGGCTGGCACCCCAGGATTACCATCGTTTCCATCTTCCTGTCTCTGG
                      ____________________________________________________________
consensus TTTGGTGATATTTAGGCTGGCACCCCAGGATTACCATCGTTTCCATCTTCCTGTCTCTGG
 
. : . : . : . : . : . :
rJMFF010I16+ AACTATTGAGAAATTTATAGACATACCTGGATGTTTATATACTGTAAATCCTATTGCTGT
rJMFF005B15+ AACTATTGAGAAATTTATAGACATACCTGGATGTTTATATACTGTAAATCCTATTGCTGT
rJMSF003I20+ AACTATTGAGAAATTTATAGACATACCTGGATGTTTATATACTGTAAATCCTATTGCTGT
rJMFF037K20+ AACTATTGAGAAATTTATAGACATACCTGGATGTTTATATACTGTAAATCCTATTGCTGT
rJMFF002O23+ AACTATTGAGAAATTTATAGACATACCTGGATGTTTATATACTGTAAATCCTATTGCTGT
                      ____________________________________________________________
consensus AACTATTGAGAAATTTATAGACATACCTGGATGTTTATATACTGTAAATCCTATTGCTGT
 
. : . : . : . : . : . :
rJMFF010I16+ GAATAGCAAGTATTGTAATGTCTTCACAGAGAATAAGAGGGCTGTGTCAATAATATCAAC
rJMFF005B15+ GAATAGCAAGTATTGTAATGTCTTCACAGAGAATAAGAGGGCTGTGTCAATAATATCAAC
rJMSF003I20+ GAATAGCAAGTATTGTAATGTCTTCACAGAGAATAAGAGGGCTGTGTCAATAATATCAAC
rJMFF037K20+ GAATAGCAAGTATTGTAATGTCTTCACAGAGAATAAGAGGGCTGTGTCAATAATATCAAC
rJMFF002O23+ GAATAGCAAGTATTGTAATGTCTTCACAGAGAATAAGAGGGCTGTGTCAATAATATCAAC
                      ____________________________________________________________
consensus GAATAGCAAGTATTGTAATGTCTTCACAGAGAATAAGAGGGCTGTGTCAATAATATCAAC
 
. : . : . : . : . : . :
rJMFF010I16+ AGAAGACTTTGGAAAGGTGGCCTTTGTTGCAATTGGAGCAACAATGGTTGGCAGCATTAC
rJMFF005B15+ AGAAGACTTTGGAAAGGTGGCCTTTGTTGCAATTGGAGCAACAATGGTTGGCAGCATTAC
rJMSF003I20+ AGAAGACTTTGGAAAGGTGGCCTTTGTTGCAATTGGAGCAACAATGGTTGGCAGCATTAC
rJMFF037K20+ AGAAGACTTTGGAAAGGTGGCCTTTGTTGCAATTGGAGCAACAATGGTTGGCAGCATTAC
rJMFF002O23+ AGAAGACTTTGGAAAGGTGGCCTTTGTTGCAATTGGAGCAACAATGGTTGGCAGCATTAC
                      ____________________________________________________________
consensus AGAAGACTTTGGAAAGGTGGCCTTTGTTGCAATTGGAGCAACAATGGTTGGCAGCATTAC
 
. : . : . : . : . : . :
rJMFF010I16+ TTTTTCGAAGAAGGAGCGTGACTATGTCAACAAGGGTGACGAGTTTGGGTATTTCTCTTT
rJMFF005B15+ TTTTTCGAAGAAGGAGCGTGACTATGTCAACAAGGGTGACGAGTTTGGGTATTTCTCTTT
rJMSF003I20+ TTTTTCGAAGAAGGAGCGTGACTATGTCAACAAGGGTGACGAGTTTGGGTATTTCTCTTT
rJMFF037K20+ TTTTTCGAAGAAGGAGCGTGACTATGTCAACAAGGGTGACGAGTTTGGGTATTTCTCTTT
rJMFF002O23+ TTTTTCGAAGAAGGAGCGTGACTATGTCAACAAGGGTGACGAGTTTGGGTATTTCTCTTT
                      ____________________________________________________________
consensus TTTTTCGAAGAAGGAGCGTGACTATGTCAACAAGGGTGACGAGTTTGGGTATTTCTCTTT
 
. : . : . : . : . : . :
rJMFF010I16+ TGGTGGAAGTACAGTGATTTGCGTCTTCGAAAAGGACTCGATAAGGATAGATGAGGACCT
rJMFF005B15+ TGGTGGAAGTACAGTGATTTGCGTCTTCGAAAAGGACTCGATAAGGATAGATGAGGACCT
rJMSF003I20+ TGGTGGAAGTACAGTGATTTGCGTCTTCGAAAAGGACTCGATAAGGATAGATGAGGACCT
rJMFF037K20+ TGGTGGAAGTACAGTGATTTGCGTCTTCGAAAAGGACTCGATAAGGATAGATGAGGACCT
rJMFF002O23+ TGGTGGAAGTACAGTGATTTGCGTCTTCGAAAAGGACTCGATAAGGATAGATGAGGACCT
                      ____________________________________________________________
consensus TGGTGGAAGTACAGTGATTTGCGTCTTCGAAAAGGACTCGATAAGGATAGATGAGGACCT
 
. : . : . : . : . : . :
rJMFF010I16+ CTTGGAAAATAGTGCACGATCTCTTGAGACATTAGTAACGGTGGGAATGCAGTTGGGGGT
rJMFF005B15+ CTTGGAAAATAGTGCACGATCTCTTGAGACATTAGTAACGGTGGGAATGCAGTTGGGGGT
rJMSF003I20+ CTTGGAAAATAGTGCACGATCTCTTGAGACATTAGTAACGGTGGGAATGCAGTTGGGGGT
rJMFF037K20+ CTTGGAAAATAGTGCACGATCTCTTGAGACATTAGTAACGGTGGGAATGCAGTTGGGGGT
rJMFF002O23+ CTTGGAAAATAGTGCACGATCTCTTGAGACATTAGTAACGGTGGGAATGCAGTTGGGGGT
                      ____________________________________________________________
consensus CTTGGAAAATAGTGCACGATCTCTTGAGACATTAGTAACGGTGGGAATGCAGTTGGGGGT
 
. : . : . : . : . : . :
rJMFF010I16+ GTCCATAAAGAAACAGGCAGATGTTAAGTCGAAGTTGGAAAATCTTTCTTTATAAACATG
rJMFF005B15+ GTCCATAAAGAAACAGGCAGATGTTAAGTCGAAGTTGGAAAATCTTTCTTTATAAACATG
rJMSF003I20+ GTCCATAAAGAAACAGGCAGATGTGAAGTCGAAGTTGGAAAATCTTTCTTTATAAACATG
rJMFF037K20+ GTCCATAAAGAAACAGGCAGATGTGAAGTCGAAGTTGGAAAATCTTTCTTTATAAACATG
rJMFF002O23+ GTCCATAAAGAAACAGGCAGATGTGAAGTCGAAGTTGGAAAATCTTTCTTTATAAACATG
                      ____________________________________________________________
consensus GTCCATAAAGAAACAGGCAGATGTGAAGTCGAAGTTGGAAAATCTTTCTTTATAAACATG
 
. : . : . : . : . : . :
rJMFF010I16+ ATCAGTTTGCTTTCCTTGCATGTTTATTTCATTTGGTCTTGTCCTAAATGTGTAGAAACA
rJMFF005B15+ ATCAGTTTGCTTTCCTTGCATGTTTATTTCATTTGGTCTTGTCCTAAATGTGTAGAAACA
rJMSF003I20+ ATCAGTTTGCTTTCCTTGCATGTTTATTTCATTTGGTCTTGTCCTAAATGTGTAGAAACA
rJMFF037K20+ ATCAGTTTGCTTTCCTTGCATGTTTATTTCATTTGGTCTTGTCCTAAATGTGTAGAAACA
rJMFF002O23+ ATCAGTTTGCTTTCCTTGCATGTTTATTTCATTTGGTCTTGTCCTAAATGTGTAGAAACA
                      ____________________________________________________________
consensus ATCAGTTTGCTTTCCTTGCATGTTTATTTCATTTGGTCTTGTCCTAAATGTGTAGAAACA
 
. : . : . : . : . : . :
rJMFF010I16+ AAATAAATAA-CAGTGGGGGAGTTCATGTTCTTAGTTACATT
rJMFF005B15+ AAATAAATAA-CAGTGGGGGAGTTCATGTTCTTAGTTACATT
rJMSF003I20+ AAATAAATAACCAGTGGGGGAGTTCATGTTCTTAGTTACATTCAAGGAA
rJMFF037K20+ AAATAAATAA-CAGTGGGGGAGTTCATGTTCTTAGTTACATTCAAGGAATCCAGGTCAGT
rJMFF002O23+ AAATAAATAA-CAGTGGGGGAGTTCATGTTCTTAGTTACATTCAAGGAATCCAGGTCAGT
                      ____________________________________________________________
consensus AAATAAATAA-CAGTGGGGGAGTTCATGTTCTTAGTTACATTCAAGGAATCCAGGTCAGT
 
. : . : . : . : . : . :
rJMFF037K20+ GTTTTTGATGTATCATAGGCTATGTTCTCATTAGTGGAGCTTTTGTGGGT
rJMFF002O23+ GTTTTTGATGTATCATAGGCTATGTTCTCATTAGTGGAGCTTTTGTGGGTGTTTTCTTTA
                      ____________________________________________________________
consensus GTTTTTGATGTATCATAGGCTATGTTCTCATTAGTGGAGCTTTTGTGGGTGTTTTCTTTA