Contig 005308:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF038D12Sequence608005308 (2)ref|XP_009593389.1|5e-50PREDICTED: carboxyl-terminal-processing peptidase 3, chloroplastic [Nicotiana t896012695 (4)ref|XP_006361384.1|7e-145PREDICTED: C-terminal processing peptidase, chloroplastic-like [Solanum tuberos
JMSF050D02Sequence681005308 (2)ref|XP_009593389.1|8e-49PREDICTED: carboxyl-terminal-processing peptidase 3, chloroplastic [Nicotiana t742012695 (4)gb|KEH41542.1|1e-87carboxy-terminal processing peptidase-like protein [Medicago truncatula]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF038D12+ TTTTTTTTTTCTTCCCAGAATGCACCATTAATACTTAAATCAAACAAC
                      ____________________________________________________________
consensus TTTTTTTTTTCTTCCCAGAATGCACCATTAATACTTAAATCAAACAAC
 
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JMSF038D12+ TGAACAAGAGCAATTGGAGCATTATTTGTACAACAAAGGTTTAACCCATTTTCTGCAGAT
                      ____________________________________________________________
consensus TGAACAAGAGCAATTGGAGCATTATTTGTACAACAAAGGTTTAACCCATTTTCTGCAGAT
 
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JMSF038D12+ ATTTCCATTCTTAACAATTACTGAGAAAAACTAAAGGGAAATGGAATGGACACAGTTACC
JMSF050D02+ AATGGAATGGACACAGNTACC
                      ____________________________________________________________
consensus ATTTCCATTCTTAACAATTACTGAGAAAAACTAAAGGGAAATGGAATGGACACAGTTACC
 
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JMSF038D12+ TTGATGATTAAAAGTTGGATCAACAAAAGTCTCTCTAATTAAACCCCAAGCTTCCACAAG
JMSF050D02+ TTGATGATTAAAAGTTGGATCAACAAAAGTCTCTCTAATTAAACCCCAAGCTTCCACAAG
                      ____________________________________________________________
consensus TTGATGATTAAAAGTTGGATCAACAAAAGTCTCTCTAATTAAACCCCAAGCTTCCACAAG
 
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JMSF038D12+ TGTCCTCTGAACTGTATTCACCTCAGGAGTGTGAGACACAGGGAAAGCCACAGTGACAGT
JMSF050D02+ TGTCCTCTGAACTGTATTCACCTCAGGAGTGTGAGACACAGGGAAAGCCACAGTGACAGT
                      ____________________________________________________________
consensus TGTCCTCTGAACTGTATTCACCTCAGGAGTGTGAGACACAGGGAAAGCCACAGTGACAGT
 
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JMSF038D12+ CTCAGCTAAGACTGGAAAATTAGAACACACAGACACTGCAGCTGCAAATCCAAGCACTCC
JMSF050D02+ CTCAGCTAAGACTGGAAAATTAGAACACACAGACACTGCAGCTGCAAATCCAAGCACTCC
                      ____________________________________________________________
consensus CTCAGCTAAGACTGGAAAATTAGAACACACAGACACTGCAGCTGCAAATCCAAGCACTCC
 
. : . : . : . : . : . :
JMSF038D12+ CCTAGCAACCCATTTGAATAAATTTTCACTTTCTTCACTGGGGCTTTCATTCTTTAGCCG
JMSF050D02+ CCTAGCAACCCATTTGAATAAATTTTCACTTTCTTCACTGGGGCTTTCATTCTTTAGCCG
                      ____________________________________________________________
consensus CCTAGCAACCCATTTGAATAAATTTTCACTTTCTTCACTGGGGCTTTCATTCTTTAGCCG
 
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JMSF038D12+ GGGAGTGGACTTCCTCTTGTCCAAAGCTTGGGGAACTACCAATCTAGAGCCTGGTTTTCT
JMSF050D02+ GGGAGTGGACTTCCTCTTGTCCAAAGCTTGGGGAACTACCAATCTAGAGCCTGGTTTTCT
                      ____________________________________________________________
consensus GGGAGTGGACTTCCTCTTGTCCAAAGCTTGGGGAACTACCAATCTAGAGCCTGGTTTTCT
 
. : . : . : . : . : . :
JMSF038D12+ ACCATGATTAAAGCAAGAAAACCCGGAAGAAAAATATGGTTTTGAAGTGGGTCTAATAAG
JMSF050D02+ ACCATGATTAAAGCAAGAAAACCCGGAAGAAAAATATGGTTTTGAAGTGGGTCTAATAAG
                      ____________________________________________________________
consensus ACCATGATTAAAGCAAGAAAACCCGGAAGAAAAATATGGTTTTGAAGTGGGTCTAATAAG
 
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JMSF038D12+ AGGCTTAGACATTGAATAGTGGCCAAGATCGAGCTTTGAGCAGAGAGTTTCCATGACTCC
JMSF050D02+ AGGCTTAAACATTGAATAGTGGCCAAGATCGAGCTTTGAGCAGAGAGTTTCCATGACTCC
                      ____________________________________________________________
consensus AGGCTTAGACATTGAATAGTGGCCAAGATCGAGCTTTGAGCAGAGAGTTTCCATGACTCC
 
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JMSF038D12+ CGGGAATGGGAAAAGTTCC
JMSF050D02+ CGGGAATGGGAAAAGTTCCAAACTTTTTGGGTATCAATAAAGTTAAGATGAATGGCCTAA
                      ____________________________________________________________
consensus CGGGAATGGGAAAAGTTCCAAACTTTTTGGGTATCAATAAAGTTAAGATGAATGGCCTAA
 
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JMSF050D02+ CATTAGGAACTAGAAAGCTGTGTAAAACTAAAAATTTCCTGGGTTTTGGCTGCTTATGCA
                      ____________________________________________________________
consensus CATTAGGAACTAGAAAGCTGTGTAAAACTAAAAATTTCCTGGGTTTTGGCTGCTTATGCA
 
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JMSF050D02+ CGCAGTGACTCGGTGATTCCAATTTGGTGGCGGCAAGGCGGTGAGGCGGTAGGGCCTACG
                      ____________________________________________________________
consensus CGCAGTGACTCGGTGATTCCAATTTGGTGGCGGCAAGGCGGTGAGGCGGTAGGGCCTACG
 
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JMSF050D02+ TGAATCTTCGCGTCTGTGGTGGTTATCTCTGTTGCGTATCAGAGTATCTGCGTGTCAACC
                      ____________________________________________________________
consensus TGAATCTTCGCGTCTGTGGTGGTTATCTCTGTTGCGTATCAGAGTATCTGCGTGTCAACC