| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF017L23 | Sequence | 537 | 005298 (5) | ref|XP_009631006.1| | 2e-52 | PREDICTED: uncharacterized protein LOC104120853 isoform X1 [Nicotiana tomentosi | 716 | 013010 (4) | ref|XP_009797985.1| | 3e-51 | PREDICTED: uncharacterized protein LOC104244291 isoform X2 [Nicotiana sylvestri |
| JMFF035C16 | Sequence | 492 | 005298 (5) | ref|XP_009631006.1| | 3e-61 | PREDICTED: uncharacterized protein LOC104120853 isoform X1 [Nicotiana tomentosi | 785 | 013010 (4) | ref|XP_009797985.1| | 1e-57 | PREDICTED: uncharacterized protein LOC104244291 isoform X2 [Nicotiana sylvestri |
| JMSF008O05 | Sequence | 318 | 005298 (5) | ref|XP_009797984.1| | 9e-15 | PREDICTED: uncharacterized protein LOC104244291 isoform X1 [Nicotiana sylvestri | 722 | 021380 | ref|XP_009631014.1| | 2e-22 | PREDICTED: uncharacterized protein LOC104120853 isoform X2 [Nicotiana tomentosi |
| JMSF040E17 | Sequence | 679 | 005298 (5) | ref|XP_009797984.1| | 3e-65 | PREDICTED: uncharacterized protein LOC104244291 isoform X1 [Nicotiana sylvestri | 678 | 013010 (4) | ref|XP_009797984.1| | 1e-32 | PREDICTED: uncharacterized protein LOC104244291 isoform X1 [Nicotiana sylvestri |
| JMSF048P16 | Sequence | 305 | 005298 (5) | ||||||||
This contig is upended
. : . : . : . : . : . :
JMSF040E17+ GGCTGGGTTGAAGGAGCAATTGATTGATGATGCAAAGACTCTGACGATG
____________________________________________________________
consensus GGCTGGGTTGAAGGAGCAATTGATTGATGATGCAAAGACTCTGACGATG
. : . : . : . : . : . :
JMSF040E17+ GACCAAAAGGTAGATGCAGGGGTTGAGAAGTTCGCTGCCTTTTGCGGGATCCTGAAATAG
____________________________________________________________
consensus GACCAAAAGGTAGATGCAGGGGTTGAGAAGTTCGCTGCCTTTTGCGGGATCCTGAAATAG
. : . : . : . : . : . :
JMFF035C16+ TCCACTCCCTA
JMSF040E17+ TAGGGCTGGCAAGTTGATCATGAACAGGTTGGTTACCACCAACCCTTTCTCCACTCCCTA
____________________________________________________________
consensus TAGGGCTGGCAAGTTGATCATGAACAGGTTGGTTACCACCAACCCTTTCTCCACTCCCTA
. : . : . : . : . : . :
JMFF035C16+ ATCCTCTGTATGAGATCATCAGCATTGACTTTTGTAAGTAGATCCCGGTGCTCATCATCT
JMSF040E17+ ATCCTCTGTATGAGATCATCAGCATTGACTTTTGTAAGTAGATCCCGGTGCTCATCATCT
JMFF017L23+ CCTCTGTATGAGATCATCAGCATTGACTTTTGTAAGTAGATCCCGGTGCTCATCATCT
____________________________________________________________
consensus ATCCTCTGTATGAGATCATCAGCATTGACTTTTGTAAGTAGATCCCGGTGCTCATCATCT
. : . : . : . : . : . :
JMFF035C16+ GATACTCTCAGCTCTTTCCTGAGTTCTGTTATTAAACCTTCTTTCTCCCATGTTAGGGCA
JMSF040E17+ GATACTCTCAGCTCTTTCCTGCGTTCTGTTATTAAACCTTCTTTCTCCCATGTTAGGGCA
JMFF017L23+ GATACTCTCAGCTCTTTCCTGAGTTCTGTTATTAAACCTTCTTTCTCCCATGTTAGGGCA
____________________________________________________________
consensus GATACTCTCAGCTCTTTCCTGAGTTCTGTTATTAAACCTTCTTTCTCCCATGTTAGGGCA
. : . : . : . : . : . :
JMFF035C16+ TCTGACTGTGCTTTGAAAGCTCGTAGCACTGCACCATATGCTTCCTGTTCAAGATTGTGG
JMSF040E17+ TCTGACTGTGCTTTGAAAGCTCGTAGCACTGCACCATATGCTTCCTGTTCAAGATTGTGG
JMFF017L23+ TCTGACTGTGCTTTGAAAGCTCGTAGCACTGCACCATATGCTTCCTGTTCAAGATTGTGG
____________________________________________________________
consensus TCTGACTGTGCTTTGAAAGCTCGTAGCACTGCACCATATGCTTCCTGTTCAAGATTGTGG
. : . : . : . : . : . :
JMFF035C16+ ATTTGGGCTTCCATATCACTGTGCATCCTTTGGTATATAGCTGAACCTACATTTGACCTT
JMSF008O05+ CCATATCACTGTGCATCCTTTGGTATATAGCTGAACCTACATTTGACCTT
JMSF040E17+ ATTTGGGCTTCCATATCACTGTGCATCCTTTGGTATATAGCTGAACCTACATTTGACCTT
JMFF017L23+ ATTTGGGCTTCCATATCACTGTGCATCCTTTGGTATATAGCTGAACCTACATTTGACCTT
JMSF048P16+ ACCTT
____________________________________________________________
consensus ATTTGGGCTTCCATATCACTGTGCATCCTTTGGTATATAGCTGAACCTACATTTGACCTT
. : . : . : . : . : . :
JMFF035C16+ CCATTGCCAACAATGCTTCTTGTGGGGGCTCTATTATATTGTGATTGAGGTAGATCATCA
JMSF008O05+ CCATTGCCAACAATGCTTCTTGTGGGGGCTCTATTATATTGTGATTGAGGTAGATCATCA
JMSF040E17+ CCATTGCCAACAATGCTTCTTGTGGGGGCTCTATTATATTGTGATTGAGGTAGATCATCA
JMFF017L23+ CCATTGCCAACAATGCTTCTTGTGGGGGCTCTATTATATTGTGATTGAGGTAGATCATCA
JMSF048P16+ CCATTGCCAACAATGCTTCTTGTGGGGGCTCTATTATATTGTGATTGAGGTAGATCATCA
____________________________________________________________
consensus CCATTGCCAACAATGCTTCTTGTGGGGGCTCTATTATATTGTGATTGAGGTAGATCATCA
. : . : . : . : . : . :
JMFF035C16+ TCAGTAC--------------CGCTGCTGTCGATTACTTCATAGTCCATAGACCGAATCA
JMSF008O05+ TCAGTAC--------------CGCTGCTGTCGATTACTTCATAGTCCATAGACCGAATCA
JMSF040E17+ TCAGTAC--------------CGCTGCTGTCGATTACTTCATAGTCCATAGACCGAATCA
JMFF017L23+ TCAGTACCTGCACTTACAACACGCTGCTGTCGATTACTTCATAGTCCATAGACCGAATCA
JMSF048P16+ TCAGTACCTGCACTTACAACACGCTGCTGTCGATTACTTCATAGTCCATAGACCGAATCA
____________________________________________________________
consensus TCAGTAC--------------CGCTGCTGTCGATTACTTCATAGTCCATAGACCGAATCA
. : . : . : . : . : . :
JMFF035C16+ GATCTCCTATTCCAAATTCAGTCCGGTTCCAGTTCCAATTCCAATTCCAATTCCAATTCC
JMSF008O05+ GATCTCCTATTCCAAATTCAGTCCGGTTCCAGTTCCAATTCCAATTCCAATTCCAATTCC
JMSF040E17+ GATCTCCTATTCCAAATTCAGTCCGGTTCCAGTTCCAATTCCAATTCCAATTCCAATTCC
JMFF017L23+ GATCTCCTATTCCAAATTCAGTCCGGTTCCAGTTCCAATTCCAATTCCAATTCCAATTCC
JMSF048P16+ GATCTCCTATTCCAAATTCAGTCNGGTTCCAGTTCCAATTCCAATTCCAATTCCAATTCC
____________________________________________________________
consensus GATCTCCTATTCCAAATTCAGTCCGGTTCCAGTTCCAATTCCAATTCCAATTCCAATTCC
. : . : . : . : . : . :
JMFF035C16+ AATTCCGATATGAGCTCAACAAAGTGGAAGAATTGGAAGAACAGCGCAATCCAGCCCGCA
JMSF008O05+ AATTCCGATATGAGCTCAACAAAGTGGAAGAATTGGAAGAACAGCGCAATCCAGCCCGCA
JMSF040E17+ AATTCCGATATGAGCTCAACAAAGTGGAAGAATTGGAAGAACAGCGCAATCCAGCCCGCA
JMFF017L23+ AATTCCGATATGAGCTCAACAAAGTGGAAGAATTGGAAGAACAGCGCAATCCAGCCCGCA
JMSF048P16+ AATTCCGATATGAGCTCAACAAAGNGGAAGAATTGGAAGAACAGCGCAATCCAGCCCGCA
____________________________________________________________
consensus AATTCCGATATGAGCTCAACAAAGTGGAAGAATTGGAAGAACAGCGCAATCCAGCCCGCA
. : . : . : . : . : . :
JMFF035C16+ GGAAATCGGTAATGC
JMSF008O05+ GGAAATCGGAAATGCGATTTGCGCGAGGAAAAACCAGCTC
JMSF040E17+ GGAAATCGGAAATGCGATTTGCGCGAGGAAAAACCAGCTC
JMFF017L23+ GGAAATCGGAAATGCGATTTGCGCGAGGAAAAACCAGCTCTATAAGGGGGAGGGAAATC
JMSF048P16+ GGAAATCGGAAATGNGATTTGCGCGAGGAAAAACCAGCTCTATAAGGGGGAGGGAAATCC
____________________________________________________________
consensus GGAAATCGGAAATGCGATTTGCGCGAGGAAAAACCAGCTCTATAAGGGGGAGGGAAATCC