Contig 005292: Sequence
BLAST Hits against nr-aa DB Show
Alignment
This contig is upended
. : . : . : . : . : . :
rJMSF048I22- ACAAGTTAC
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consensus ACAAGTTAC
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rJMSF044J11- AGGCAATANTACAAATTTCATATNNTTCNCACTTACGNCGG
rJMSF048I22- AATATATTATGACATGCACAGGCAATAATACAAATTTCATATAATTCTCACTTACAACGG
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consensus AATATATTATGACATGCACAGGCAATAATACAAATTTCATATAATTCTCACTTACGACGG
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rJMSF044J11- ATTNNCGCANAACAACATATTCATAATANTCCAACTTTAATNNTGGCTTCTCCNCGCACG
rJMSF048I22- ATTAACGCAAAACAACATATTCATAATAATCCAACTTTAATTTTGGCTTCTCCACGCACG
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consensus ATTAACGCAAAACAACATATTCATAATAATCCAACTTTAATTTTGGCTTCTCCACGCACG
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rJMSF044J11- NTNCCCTTTNNCCCAATTTTANTTGGCANCTCTNNTGGNTGAAGCTTATAATATACTATT
rJMSF048I22- TTTCCCTTTAACCCAATTTTATTTGGTAACTCTCATGGTTGAAGCTTATAATATACTATT
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consensus TTTCCCTTTAACCCAATTTTATTTGGTAACTCTCATGGTTGAAGCTTATAATATACTATT
. : . : . : . : . : . :
rJMSF044J11- NTTGCNANTNGGATGNNTGGANCTCAGTTGACTTTCCCACANTTCTTCCTAANTTGGCCC
rJMSF048I22- ATTGCAATTTGGATGCATGGAACTCAATTGACTTTCCCACAATTCTTCCTAATTTGGCCC
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consensus ATTGCAATTTGGATGCATGGAACTCAGTTGACTTTCCCACAATTCTTCCTAATTTGGCCC
. : . : . : . : . : . :
rJMSF044J11- NTNGNGCCCGTGAGAGGACCAAGANTACTCATTTTCAGCNTTGCANCTGCAANATCNTTG
rJMSF048I22- CTTGTGCCCGTGAGAGGACCAAGATTACTCATTTTCAGCATTGCATCTGCAAAATCTTTG
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consensus CTTGTGCCCGTGAGAGGACCAAGATTACTCATTTTCAGCATTGCATCTGCAAAATCTTTG
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rJMSF044J11- GCAAAGATGAGAGGATT
rJMSF048I22- GCAAAAATGAAAGGATTAAAGGTATACGTCTCGACTATGGAATCTGTAGAGCCTCCATTA
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consensus GCAAAGATGAGAGGATTAAAGGTATACGTCTCGACTATGGAATCTGTAGAGCCTCCATTA
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rJMSF048I22- TAGAGTGCTTGGTCAGAATGAAAGAGTCCCTTTTGCTTCAACAAGTCCCTGAAATAACAA
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consensus TAGAGTGCTTGGTCAGAATGAAAGAGTCCCTTTTGCTTCAACAAGTCCCTGAAATAACAA
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rJMSF048I22- TTGTCAAACGTGGTCGGAGTGGGATCCATTGGAGTAAGGTTGTTGTCACCTCCGCTTTGA
JMSF044J11+ GCTTTGA
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consensus TTGTCAAACGTGGTCGGAGTGGGATCCATTGGAGTAAGGTTGTTGTCACCTCCGCTTTGA
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rJMSF048I22- GGACATATTGCTTGCAACGCTGATGCAAATAAGGGATCTATGTTGGTGTCGTTGTAGATT
JMSF044J11+ GGACATATTGCTTGCAACGCTGATGCAAATAAGGGATCTATGTTGGTGTCGTTGTAGATT
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consensus GGACATATTGCTTGCAACGCTGATGCAAATAAGGGATCTATGTTGGTGTCGTTGTAGATT
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rJMSF048I22- CGAGCTCGAAATGTTGTGCACCTAGCTTTCCCTATTGTGTGGCCACCTGAGAGAGCAACC
JMSF044J11+ CGAGCTCGAAATGTTGTGCACCTAGCTTTCCCTATTGTGTGGCCACCTGAGAGAGCAACC
JMSF048I22+ TGAGAGAGCAACC
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consensus CGAGCTCGAAATGTTGTGCACCTAGCTTTCCCTATTGTGTGGCCACCTGAGAGAGCAACC
. : . : . : . : . : . :
rJMSF048I22- AATTCCCTAGCACTAAAACCGTGTTTGGAGAAAGAAGATATGAGTTGGTTGAG
JMSF044J11+ AATTCCCTAGCACTAAAACCGTGTTTGGAGAAAGAAGATATGAGTTGGTTGAGATTAAGA
JMSF048I22+ AATTCCCTAGCACTAAAACCGTGTTTGGAGAAAGAAGATATGAGTTGGTTGAGATTAAGA
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consensus AATTCCCTAGCACTAAAACCGTGTTTGGAGAAAGAAGATATGAGTTGGTTGAGATTAAGA
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JMSF044J11+ GTTGGTGCAGGAAGGTTGTTGTCAGCTGCACTTTTACTTGCTGTGGTTGAGTCTCGTCTC
JMSF048I22+ GTTGGTGCAGGAAGGTTGTTGTCAGCTGCACTTTTACTTGCTGTGGTTGAGTCTCGTCTC
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consensus GTTGGTGCAGGAAGGTTGTTGTCAGCTGCACTTTTACTTGCTGTGGTTGAGTCTCGTCTC
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JMSF044J11+ CCTAATAAAACATTCCAACTAGGACCGCCAAGCACAACAGTTGAGTCTCGAGCAGCAACA
JMSF048I22+ CCTAATAAAACATTCCAACTAGGACCGCCAAGCACAACAGTTGAGTCTCGAGCAGCAACA
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consensus CCTAATAAAACATTCCAACTAGGACCGCCAAGCACAACAGTTGAGTCTCGAGCAGCAACA
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JMSF044J11+ GCTACAATATCAGCACAAGATACAACGCCGGGACAACAACTCTCAAGTTTAGCTTTAATG
JMSF048I22+ GCTACAATATCAGCACAAGATACAACGCCGGGACAACAACTCTCAAGTTTAGCTTTAATG
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consensus GCTACAATATCAGCACAAGATACAACGCCGGGACAACAACTCTCAAGTTTAGCTTTAATG
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JMSF044J11+ TTGTCAATCACATTAAGTCCTCTTATTGAGTTGTTATTTGCTTTTGAAGTTTGTTCCCCG
JMSF048I22+ TTGTCAATCACATTAAGTCCTCTTATTGAGTTGTTATTTGCTTTTGAAGTTTGTTCCCCG
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consensus TTGTCAATCACATTAAGTCCTCTTATTGAGTTGTTATTTGCTTTTGAAGTTTGTTCCCCG
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JMSF044J11+ GTGAAAGTTGGTGTATCATCCAACAAAATCGATCCATCACAGCCATTGACAAAGCAGTCA
JMSF048I22+ GTGAAAGTTGGTGTATCATCCAACAAAATCGATCCATCACAGCCATTGACAAAGCAGTCA
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consensus GTGAAAGTTGGTGTATCATCCAACAAAATCGATCCATCACAGCCATTGACAAAGCAGTCA
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JMSF044J11+ TGGAAATGGAGACGAAGCAAGGATGCTCCCATTCGAGTCTCAGCCTGAATAGCAGATATC
JMSF048I22+ TGGAAATGGAGACGAAGCAAGGATGCTCCCATTCGAGTCTCAGCCTGAATAGCAGATATC
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consensus TGGAAATGGAGACGAAGCAAGGATGCTCCCATTCGAGTCTCAGCCTGAATAGCAGATATC
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JMSF044J11+ ACACCCGATTTGATAATGGAAAGAGCGTTGGGACAAGATTTTGAGTAAAAATTTGCAGAC
JMSF048I22+ ACACCCGATTTGATAATGGAAAGAGCGTTGGGACAAGATTTTGAGTAAAAATTTGCAGAC
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consensus ACACCCGATTTGATAATGGAAAGAGCGTTGGGACAAGATTTTGAGTAAAAATTTGCAGAC
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JMSF044J11+ AATTGAGCATAACTCAACCCACAGAGAATCAAGAAGAGTAGACATGAGAGTATGAATGGA
JMSF048I22+ AATTGAGCAGAACTCAACCCACAGAGAATCAAGAAGAGTAGACATGAGAGTATGAATGGA
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consensus AATTGAGCATAACTCAACCCACAGAGAATCAAGAAGAGTAGACATGAGAGTATGAATGGA
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JMSF044J11+ GAAGGAATTGTAGTCTTCATCATGACTACTATTGTATGAGAAAGGAGAAAGGAAAGAAAG
JMSF048I22+ GAAGGAATTGTAGTCTTCATCATGACTACTATTGTATGAGAAAGGAGAAAGGAAAGAAAG
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consensus GAAGGAATTGTAGTCTTCATCATGACTACTATTGTATGAGAAAGGAGAAAGGAAAGAAAG
. : . : . : . : . : . :
JMSF044J11+ TTTTCCAAGTTTCAACTTAGAAACAAAGAAAGAAATGGTGGCTTGGCTTGTGGCCT
JMSF048I22+ TTTTCCAAGTTTCAACTTAGAAACAAAGAAAGAAATGGTGGCTTGGCTTGTGGCCTAGTC
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consensus TTTTCCAAGTTTCAACTTAGAAACAAAGAAAGAAATGGTGGCTTGGCTTGTGGCCTAGTC