| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF023P07 | Sequence | 479 | 005291 (7) | ref|XP_009800228.1| | 3e-81 | PREDICTED: protein transport protein SEC23 [Nicotiana sylvestris] | 656 | 002995 (5) | ref|XP_009800228.1| | 5e-108 | PREDICTED: protein transport protein SEC23 [Nicotiana sylvestris] |
| JMFS063E09 | Sequence | 627 | 005291 (7) | ref|XP_009800228.1| | 1e-128 | PREDICTED: protein transport protein SEC23 [Nicotiana sylvestris] | |||||
| JMFS101E03 | Sequence | 641 | 005291 (7) | ref|XP_009800228.1| | 4e-121 | PREDICTED: protein transport protein SEC23 [Nicotiana sylvestris] | |||||
| JMSF021O21 | Sequence | 668 | 005291 (7) | ref|XP_009800228.1| | 3e-116 | PREDICTED: protein transport protein SEC23 [Nicotiana sylvestris] | 721 | 002995 (5) | ref|XP_009800228.1| | 2e-110 | PREDICTED: protein transport protein SEC23 [Nicotiana sylvestris] |
| JMSF036B04 | Sequence | 651 | 005291 (7) | ref|XP_009800228.1| | 4e-110 | PREDICTED: protein transport protein SEC23 [Nicotiana sylvestris] | 680 | 002995 (5) | ref|XP_009800228.1| | 6e-110 | PREDICTED: protein transport protein SEC23 [Nicotiana sylvestris] |
| JMSF036E12 | Sequence | 651 | 005291 (7) | ref|XP_009800228.1| | 4e-110 | PREDICTED: protein transport protein SEC23 [Nicotiana sylvestris] | 752 | 002995 (5) | ref|XP_009800228.1| | 2e-112 | PREDICTED: protein transport protein SEC23 [Nicotiana sylvestris] |
| JMSF048G04 | Sequence | 685 | 005291 (7) | ref|XP_009800228.1| | 2e-115 | PREDICTED: protein transport protein SEC23 [Nicotiana sylvestris] | 714 | 002995 (5) | ref|XP_009800228.1| | 6e-108 | PREDICTED: protein transport protein SEC23 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMFS063E09+ CTGATGCCGGCAACAAAACCCTTGAAATACTCTCCTGTGAAAGCCCGTCTCTTG
____________________________________________________________
consensus CTGATGCCGGCAACAAAACCCTTGAAATACTCTCCTGTGAAAGCCCGTCTCTTG
. : . : . : . : . : . :
JMFS063E09+ CACCTGCAATAACCCCAGTAGTTGGTTTTGGTTTCTTGATAAAGAAACCCATCTGCTCCA
____________________________________________________________
consensus CACCTGCAATAACCCCAGTAGTTGGTTTTGGTTTCTTGATAAAGAAACCCATCTGCTCCA
. : . : . : . : . : . :
JMFS063E09+ AAATTTGGTCTTTAGTGATCTCCTTCGACCCCTTGAACACATAAACCTTTGGAATCTGCC
JMFS101E03+ AGTGATCTCCTTCGACCCCTTGAACACATAAACCTTTGGAATCTGCC
JMSF021O21+ AACACATAAACCTTTGGAATCTGCC
JMSF036E12+ TGCC
JMSF036B04+ TGCC
JMSF048G04+ AACACATAAACCTTTGGAATCTGCC
____________________________________________________________
consensus AAATTTGGTCTTTAGTGATCTCCTTCGACCCCTTGAACACATAAACCTTTGGAATCTGCC
. : . : . : . : . : . :
JMFS063E09+ CAAAGCCCAGCTCATGAACTTGAACATATGAACCAAAAGTTATTAACCCAATCAAGCAAT
JMFS101E03+ CAAAGCCCAGCTCATGAACTTGAACATATGAACCAAAAGTTATTAACCCAATCAAGCAAT
JMSF021O21+ CAAAGCCCAGCTCATGAACTTGAACATATGAACCAAAAGTTATTAACCCAATCAAGCAAT
JMSF036E12+ CAAAGCCCAGCTCATGAACTTGAACATATGAACCAAAAGTTATTAACCCAATCAAGCAAT
JMSF036B04+ CAAAGCCCAGCTCATGAACTTGAACATATGAACCAAAAGTTATTAACCCAATCAAGCAAT
JMSF048G04+ CAAAGCCCAGCTCATGAACTTGAACATATGAACCAAAAGTTATTAACCCAATCAAGCAAT
____________________________________________________________
consensus CAAAGCCCAGCTCATGAACTTGAACATATGAACCAAAAGTTATTAACCCAATCAAGCAAT
. : . : . : . : . : . :
JMFS063E09+ TCTCAGGCAATGTGCCTAACACCTGTAAGAGGGAGGATTTGAGGAAGCCAATCTCCTCCT
JMFS101E03+ TCTCAGGCAATGTGCCTAACACCTGTAAGAGGGAGGATTTGAGGAAGCCAATCTCCTCCT
JMSF021O21+ TCTCAGGCAATGTGCCTAACACCTGTAAGAGGGAGGATTTGAGGAAGCCAATCTCCTCCT
JMSF036E12+ TCTCAGGCAATGTGCCTAACACCTGTAAGAGGGAGGATTTGAGGAAGCCAATCTCCTCCT
JMSF036B04+ TCTCAGGCAATGTGCCTAACACCTGTAAGAGGGAGGATTTGAGGAAGCCAATCTCCTCCT
JMSF048G04+ TCTCAGGCAATGTGCCTAACACCTGTAAGAGGGAGGATTTGAGGAAGCCAATCTCCTCCT
____________________________________________________________
consensus TCTCAGGCAATGTGCCTAACACCTGTAAGAGGGAGGATTTGAGGAAGCCAATCTCCTCCT
. : . : . : . : . : . :
JMFS063E09+ CAATGAGGCAGGTGTCGATGACGAAGAGGAAGACAGGGCTAGTGACGGCGGCTCTCTCGG
JMFS101E03+ CAATGAGGCAGGTGTCGATGACGAAGAGGAAGACAGGGCTAGTGACGGCGGCTCTCTCGG
JMSF021O21+ CAATGAGGCAGGTGTCGATGACGAAGAGGAAGACAGGGCTAGTGACGGCGGCTCTCTCGG
JMSF036E12+ CAATGAGGCAGGTGTCGATGACGAAGAGGAAGACAGGGCTAGTGACGGCGGCTCTCTCGG
JMFF023P07+ CAATGAGGCAGGTGTCGATGACGAAGAGGAAGACAGGGCTAGTGACGGCGGCTCTCTCGG
JMSF036B04+ CAATGAGGCAGGTGTCGATGACGAAGAGGAAGACAGGGCTAGTGACGGCGGCTCTCTCGG
JMSF048G04+ CAATGAGGCAGGTGTCGATGACGAAGAGGAAGACAGGGCTAGTGACGGCGGCTCTCTCGG
____________________________________________________________
consensus CAATGAGGCAGGTGTCGATGACGAAGAGGAAGACAGGGCTAGTGACGGCGGCTCTCTCGG
. : . : . : . : . : . :
JMFS063E09+ GGGCGCTCTCGTATTCAATTGTGGTGTACTGAGGGAAGAGCTCGGCGGGCATGTTAGTGT
JMFS101E03+ GGGCGCTCTCGTATTCAATTGTGGTGTACTGAGGGAAGAGCTCGGCGGGCATGTTAGTGT
JMSF021O21+ GGGCGCTCTCGTATTCAATTGTGGTGTACTGAGGGAAGAGCTCGGCGGGCATGTTAGTGT
JMSF036E12+ GGGCGCTCTCGTATTCAATTGTGGTGTACTGAGGGAAGAGCTCGGCGGGCATGTTAGTGT
JMFF023P07+ GGGCGCTCTCGTATTCAATTGTGGTGTACTGAGGGAAGAGCTCGGCGGGCATGTTAGTGT
JMSF036B04+ GGGCGCTCTCGTATTCAATTGTGGTGTACTGAGGGAAGAGCTCGGCGGGCATGTTAGTGT
JMSF048G04+ GGGCGCTCTCGTATTCAATTGTGGTGTACTGAGGGAAGAGCTCGGCGGGCATGTTAGTGT
____________________________________________________________
consensus GGGCGCTCTCGTATTCAATTGTGGTGTACTGAGGGAAGAGCTCGGCGGGCATGTTAGTGT
. : . : . : . : . : . :
JMFS063E09+ CGGAGATGGACTGGTAATTGGCGGGGAAATGGTTGCGCTGCAAGCAGAAGCAGCAGATCC
JMFS101E03+ CGGAGATGGACTGGTAATTGGCGGGGAAATGGTTGCGCTGCAAGCAGAAGCAGCAGATCC
JMSF021O21+ CGGAGATGGACTGGTAATTGGCGGGGAAATGGTTGCGCTGCAAGCAGAAGCAGCAGATCC
JMSF036E12+ CGGAGATGGACTGGTAATTGGCGGGGAAATGGTTGCGCTGCAAGCAGAAGCAGCAGATCC
JMFF023P07+ CGGAGATGGACTGGTAATTGGCGGGGAAATGGTTGCGCTGCAAGCAGAAGCAGCAGATCC
JMSF036B04+ CGGAGATGGACTGGTAATTGGCGGGGAAATGGTTGCGCTGCAAGCAGAAGCAGCAGATCC
JMSF048G04+ CGGAGATGGACTGGTAATTGGCGGGGAAATGGTTGCGCTGCAAGCAGAAGCAGCAGATCC
____________________________________________________________
consensus CGGAGATGGACTGGTAATTGGCGGGGAAATGGTTGCGCTGCAAGCAGAAGCAGCAGATCC
. : . : . : . : . : . :
JMFS063E09+ ACATCTTGGTGGTGGAGAAGTCGACGACGGAGAAGGGATTGAGCACCGATCGGCAGTTCC
JMFS101E03+ ACATCTTGGTGGTGGAGAAGTCGACGACGGAGAAGGGATTGAGCACCGATCGGCAGTTCC
JMSF021O21+ ACATCTTGGTGGTGGAGAAGTCGACGACGGAGAAGGGATTGAGCACCGATCGGCAGTTCC
JMSF036E12+ ACATCTTGGTGGTGGAGAAGTCGACGACGGAGAAGGGATTGAGCACCGATCGGCAGTTCC
JMFF023P07+ ACATCTTGGTGGTGGAGAAGTCGACGACGGAGAAGGGATTGAGCACCGATCGGCAGTTCC
JMSF036B04+ ACATCTTGGTGGTGGAGAAGTCGACGACGGAGAAGGGATTGAGCACCGATCGGCAGTTCC
JMSF048G04+ ACATCTTGGTGGTGGAGAAGTCGACGACGGAGAAGGGATTGAGCACCGATCGGCAGTTCC
____________________________________________________________
consensus ACATCTTGGTGGTGGAGAAGTCGACGACGGAGAAGGGATTGAGCACCGATCGGCAGTTCC
. : . : . : . : . : . :
JMFS063E09+ TGCAGCGGAGCGGAGCATAGGGGAGGACCGGGTGGTCCGGGAAGGGTTTTAAGGGAGTGT
JMFS101E03+ TGCAGCGGAGCGGAGCATAGGGGAGGACCGGGTGGTCCGGGAAGGGTTTTAAGGGAGTGT
JMSF021O21+ TGCAGCGGAGCGGAGCATAGGGGAGGACCGGGTGGTCCGGGAAGGGTTTTAAGGGAGTGT
JMSF036E12+ TGCAGCGGAGCGGAGCATAGGGGAGGACCGGGTGGTCCGGGAAGGGTTTTAAGGGAGTGT
JMFF023P07+ TGCAGCGGAGCGGAGCATAGGGGAGGACCGGGTGGTCCGGGAAGGGTTTTAAGGGAGTGT
JMSF036B04+ TGCAGCGGAGCGGAGCATAGGGGAGGACCGGGTGGTCCGGGAAGGGTTTTAAGGGAGTGT
JMSF048G04+ TGCAGCGGAGCGGAGCATAGGGGAGGACCGGGTGGTCCGGGAAGGGTTTTAAGGGAGTGT
____________________________________________________________
consensus TGCAGCGGAGCGGAGCATAGGGGAGGACCGGGTGGTCCGGGAAGGGTTTTAAGGGAGTGT
. : . : . : . : . : . :
JMFS063E09+ AGATGGCGGAGAACGGAATCACGCATTGCGCCG
JMFS101E03+ AGATGGCGGAGACCGGAATCACGCATTGCGCCGCCTCGGATTTCGTCCCCGGCAAGACGT
JMSF021O21+ AGATGGCGGAGACCGGAATCACGCATTGCGCCGCCTCGGATTTCGTCCCCGGCAAGACGT
JMSF036E12+ AGATGGCGGAGACCGGAATCACGCATTGCGCCGCCTCGGATTTCGTCCCCGGCAAGACGT
JMFF023P07+ AGATGGCGGAGACCGGAATCACGCATTGCGCCGCCTCGGATTTCGTCCCCGGCAAGACGT
JMSF036B04+ AGATGGCGGAGACCGGAATCACGCATTGCGCCGCCTCGGATTTCGTCCCCGGCAAGACGT
JMSF048G04+ AGATGGCGGAGACCGGAATCACGCATTGCGCCGCCTCGGATTTCGTCCCCGGCAAGACGT
____________________________________________________________
consensus AGATGGCGGAGACCGGAATCACGCATTGCGCCGCCTCGGATTTCGTCCCCGGCAAGACGT
. : . : . : . : . : . :
JMFS101E03+ TCCACGGCATCCGCACCGCATCTTGAGCTTCCAGCTCCAGAAACTCCGTCATGCTTAACG
JMSF021O21+ TCCACGGCATCCGCACCGCATCTTGAGCTTCCAGCTCCAGAAACTCCGTCATGCTTAACG
JMSF036E12+ TCCACGGCATCCGCACCGCATCTTGAGCTTCCAGCTCCAGAAACTCCGTCATGCTTAACG
JMFF023P07+ TCCACGGCATCCGCACCGCATCTTGAGCTTCCAGCTCCAGAAACTCCGTCATGCTTAACG
JMSF036B04+ TCCACGGCATCCGCACCGCATCTTGAGCTTCCAGCTCCAGAAACTCCGTCATGCTTAACG
JMSF048G04+ TCCACGGCATCCGCACCGCATCTTGAGCTTCCAGCTCCAGAAACTCCGTCATGCTTAACG
____________________________________________________________
consensus TCCACGGCATCCGCACCGCATCTTGAGCTTCCAGCTCCAGAAACTCCGTCATGCTTAACG
. : . : . : . : . : . :
JMFS101E03+ GCGAACGGCTGTGATCGTCGCAAATCGGGCCTCCGATGGTGGCGCTCGCACGGC
JMSF021O21+ GCGAACGGCTGTGATCGTCGCAAATCGGGCCTCCGATGGTGGCGCTCGCACGGCGTTACA
JMSF036E12+ GCGAACGGCTGTGATCGTCGCAAATCGGGCCTCCGATGGTGGCGCTCGCACGGCGTTACA
JMFF023P07+ GCGAACGGCTGTGATCGTCGCAAATCGGGCCTCCGATGGTGGCGCTCGCACGGCGTTAC
JMSF036B04+ GCGAACGGCTGTGATCGTCGCAAATCGGGCCTCCGATGGTGGCGCTCGCACGGCGTTACA
JMSF048G04+ GCGAACGGCTGTGATCGTCGCAAATCGGGCCTCCGATGGTGGCGCTCGCACGGCGTTACA
____________________________________________________________
consensus GCGAACGGCTGTGATCGTCGCAAATCGGGCCTCCGATGGTGGCGCTCGCACGGCGTTACA
. : . : . : . : . : . :
JMSF021O21+ GCTCACAACAGACTAAAGTTAAAAGAGTTGTGAGTGCTA
JMSF036E12+ GCTCACAACAGACTAAAGTTAAAAGAGTTGTGAGTGCTA
JMSF036B04+ GCTCACAACAGACTAAAGTTAAAAGAGTTGTGAGTGCTA
JMSF048G04+ GCTCACAACAGACTAAAGTTAAAAGAGTTGTGAGTGCTACGATGATGGCCGATGCCCCTC
____________________________________________________________
consensus GCTCACAACAGACTAAAGTTAAAAGAGTTGTGAGTGCTACGATGATGGCCGATGCCCCTC