Contig 005277:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF044E04Sequence643005277 (3)ref|XP_009776163.1|8e-62PREDICTED: uncharacterized protein LOC104225980 isoform X4 [Nicotiana sylvestri506008642 (3)ref|XP_009776163.1|2e-22PREDICTED: uncharacterized protein LOC104225980 isoform X4 [Nicotiana sylvestri
JMSF024M01Sequence684005277 (3)ref|XP_009776162.1|2e-81PREDICTED: uncharacterized protein LOC104225980 isoform X3 [Nicotiana sylvestri691008642 (3)ref|XP_010324617.1|1e-40PREDICTED: uncharacterized protein LOC101247143 isoform X1 [Solanum lycopersicu
JMSF045O11Sequence719005277 (3)ref|XP_009776162.1|3e-82PREDICTED: uncharacterized protein LOC104225980 isoform X3 [Nicotiana sylvestri545008642 (3)ref|XP_009776163.1|1e-22PREDICTED: uncharacterized protein LOC104225980 isoform X4 [Nicotiana sylvestri

Alignment

This contig is upended


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JMSF024M01+           CTGAAAAGGCAAATCGTGCAACCGCAGCCATTTAACATTAAAACTGCGACCCCAAGGATT
JMSF045O11+            TGAAAAGGCAAATCGTGCAACCGCAGCCATTTAACATTAAAACTGCGACCCCAAGGATT
                      ____________________________________________________________
consensus             CTGAAAAGGCAAATCGTGCAACCGCAGCCATTTAACATTAAAACTGCGACCCCAAGGATT
 
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JMSF024M01+           GCGCCCACTACTTCCTNGGCTCCAGACATGGTCACGTCTCCCAACAGATGATGTCATTTG
JMFF044E04+                            GGCTCCAGACATGGTCACGTCTCCCAACAGATGATGTCATTTG
JMSF045O11+           GCGCCCACCACTTCCTTGGCTCCAGACATGGTCACGTCTCCCAACAGATGATGTCATTTG
                      ____________________________________________________________
consensus             GCGCCCACTACTTCCTTGGCTCCAGACATGGTCACGTCTCCCAACAGATGATGTCATTTG
 
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JMSF024M01+           TGCATATCCTTGGAAGAAACCACTCATGTTGACACTAAATATTAGAATAACCTTCTTTGA
JMFF044E04+           TGCATATCCTGNGAAGAAACCACTCATGTGNACACTAAATATTAGAATAACCTTCTTTGA
JMSF045O11+           TGCATATCCTTGGAAGAAACCACTCATGTTGACACTAAATATTAGAATAACCTTCTTTGA
                      ____________________________________________________________
consensus             TGCATATCCTTGGAAGAAACCACTCATGTTGACACTAAATATTAGAATAACCTTCTTTGA
 
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JMSF024M01+           ATTATGAAAGGCTTCCTCCAGAATATGCTCATTCATAACTTGTGTTGCCCAAATGCCTTT
JMFF044E04+           ATTATGAAAGGCTTCCTCCAGAATATGCTCATTCATAACTTGTGTTGCCCAAATGCCTTT
JMSF045O11+           ATTATGAAAGGCTTCCTCCAGAATATGCTCATTCATAACTTGTGTTGCCCAAATGCCTTT
                      ____________________________________________________________
consensus             ATTATGAAAGGCTTCCTCCAGAATATGCTCATTCATAACTTGTGTTGCCCAAATGCCTTT
 
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JMSF024M01+           CTTTACTGACAATTGAAGGTTTTCATGGTTCAAACTCTTGATAATGAAATATCTTGTGCC
JMFF044E04+           CTTTACTGACAATTGAAGGTTTTCATGGTTCAAACTCTTGATAATGAAATATCTTGTGCC
JMSF045O11+           CTTTACTGACAATTGAAGGTTTTCATGGTTCAAACTCTTGATAATGAAATATCTTGTGCC
                      ____________________________________________________________
consensus             CTTTACTGACAATTGAAGGTTTTCATGGTTCAAACTCTTGATAATGAAATATCTTGTGCC
 
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JMSF024M01+           ATGCAGCTTTCCATTCCCAACTGCAGCTGAAATGCCAATCTGATCACATGGGATTTCCTG
JMFF044E04+           ATGCAGCTTTCCATTCCCAACTGCAGCTGAAATGCCAATCTGATCACATGGGATTTCCTG
JMSF045O11+           ATGCAGCTTTCCATTCCCAACTGCAGCTGAAATGCCAATCTGATCACATGGGATTTCCTG
                      ____________________________________________________________
consensus             ATGCAGCTTTCCATTCCCAACTGCAGCTGAAATGCCAATCTGATCACATGGGATTTCCTG
 
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JMSF024M01+           GTAATCTGCTCCAGAATGATAGGTATTGTTCTTCTCTCTATAGTTTGGGATATCTGGATC
JMFF044E04+           GTAATCTGCTCCAGAATGATAGGTATTGTTCTTCTCTCTATAGTTTGGGATATCTGGATC
JMSF045O11+           GTAATCTGCTCCAGAATGATAGGTATTGTTCTTCTCTCTATAGTTTGGGATATCTGGATC
                      ____________________________________________________________
consensus             GTAATCTGCTCCAGAATGATAGGTATTGTTCTTCTCTCTATAGTTTGGGATATCTGGATC
 
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JMSF024M01+           ATCCATATTCCCTTTGTCATTTTTCCATTCAGTCCCCGATGATTCAACTACAGATACATT
JMFF044E04+           ATCCATATTCCCTTTGTCATTTTTCCATTCAGTCCCCGATGATTCAACTACAGATACATT
JMSF045O11+           ATCCATATTCCCTTTGTCATTTTTCCATTCAGTCCCCGATGATTCAACTACAGATACATT
                      ____________________________________________________________
consensus             ATCCATATTCCCTTTGTCATTTTTCCATTCAGTCCCCGATGATTCAACTACAGATACATT
 
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JMSF024M01+           TTCTTTTGCAGTATCTGATGACATATCTTGGACACCTTCTATAACATGGTCGCAACAGAA
JMFF044E04+           TTCTTTTGCAGTATCTGATGACATATCTTGGACACCTTCTATAACATGGTCGCAACAGAA
JMSF045O11+           TTCTTTTGCAGTATCTGATGACATATCTTGGACACCTTCTATAACATGGTCGCAACAGAA
                      ____________________________________________________________
consensus             TTCTTTTGCAGTATCTGATGACATATCTTGGACACCTTCTATAACATGGTCGCAACAGAA
 
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JMSF024M01+           TGATGGTGGACACAAATTAGATCTAAAAGTACTCCTGCGACGCTGCCCGTTTGCCTCCTC
JMFF044E04+           TGATGGTGGACACAAATTAGATCTAAAAGTACTCCTGCGACGCTGCCCGTTTGCCTCCTC
JMSF045O11+           TGATGGTGGACACAAATTAGATCTAAAAGTACTCCTGCAACGCTGCCCGTTTGCCTCCTC
                      ____________________________________________________________
consensus             TGATGGTGGACACAAATTAGATCTAAAAGTACTCCTGCGACGCTGCCCGTTTGCCTCCTC
 
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JMSF024M01+           GCCGGTAGCTCGCCGCCCCGCCGCCGCCAGTCGTCCGCTCGTCGCAGGAACGCCGTCTGA
JMFF044E04+           GCCGGTAGCTCGCCGCCCCGCCGCCGCCAGTCGTCCGCTCGTCGCAGGAACGCCGTCTGA
JMSF045O11+           GCCGGTAGCTCGCCGCCCCGCCGCCGCCAGTCGTCCGCTCGTCGCAGGAACGCCGTCTGA
                      ____________________________________________________________
consensus             GCCGGTAGCTCGCCGCCCCGCCGCCGCCAGTCGTCCGCTCGTCGCAGGAACGCCGTCTGA
 
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JMSF024M01+           CCGTCTCGCAAAATCGCAGACA                                      
JMFF044E04+           CCGTCTCGCAAAATCGCAGACACAGGAAGTCAGAACTCAACGAAAGTAATTGATTTACC 
JMSF045O11+           CCGTCTCGCAAAATCGCAGACACAGGAAGTCAGAACTCAACGAAAGTAATTGATTTACCC
                      ____________________________________________________________
consensus             CCGTCTCGCAAAATCGCAGACACAGGAAGTCAGAACTCAACGAAAGTAATTGATTTACCC