| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF010G10 | Sequence | 384 | 005270 (11) | gb|EYU20493.1| | 4e-28 | hypothetical protein MIMGU_mgv1a017298mg [Erythranthe guttata] | 347 | 005270 (11) | gb|EYU20493.1| | 3e-28 | hypothetical protein MIMGU_mgv1a017298mg [Erythranthe guttata] |
| JMFF010G21 | Sequence | 384 | 005270 (11) | gb|EYU20493.1| | 4e-28 | hypothetical protein MIMGU_mgv1a017298mg [Erythranthe guttata] | 268 | 005270 (11) | gb|KHN44040.1| | 4e-27 | 60S ribosomal protein L39 [Glycine soja] |
| JMFF028P09 | Sequence | 391 | 005270 (11) | gb|EYU20493.1| | 5e-28 | hypothetical protein MIMGU_mgv1a017298mg [Erythranthe guttata] | 361 | 005270 (11) | gb|EYU20493.1| | 3e-28 | hypothetical protein MIMGU_mgv1a017298mg [Erythranthe guttata] |
| JMSF013H14 | Sequence | 394 | 005270 (11) | gb|EYU20493.1| | 5e-28 | hypothetical protein MIMGU_mgv1a017298mg [Erythranthe guttata] | 342 | 005270 (11) | gb|EYU20493.1| | 3e-28 | hypothetical protein MIMGU_mgv1a017298mg [Erythranthe guttata] |
| JMSF042E05 | Sequence | 392 | 005270 (11) | gb|EYU20493.1| | 5e-28 | hypothetical protein MIMGU_mgv1a017298mg [Erythranthe guttata] | 354 | 005270 (11) | gb|EYU20493.1| | 3e-28 | hypothetical protein MIMGU_mgv1a017298mg [Erythranthe guttata] |
| JMSF045A02 | Sequence | 393 | 005270 (11) | gb|EYU20493.1| | 5e-28 | hypothetical protein MIMGU_mgv1a017298mg [Erythranthe guttata] | 483 | 017251 | gb|EYU25019.1| | 2e-40 | hypothetical protein MIMGU_mgv1a016902mg [Erythranthe guttata] |
This contig is upended
. : . : . : . : . : . :
JMFF028P09+ TTTTTTTTTTACCAATTAAGAAGCAAACATCATAT
JMSF042E05+ TTTTTTTTTACCAATTAAGAAGCAAACATCATAT
JMSF013H14+ TTTTTTTTTACCAATTAAGAAGCAAACATCATAT
JMFF010G21+ TTAAGAAGCAAACATCATAT
rJMFF028P09- CATAT
JMFF010G10+ TTAAGAAGCAAACATCATAT
JMSF045A02+ TTTTTTTTTTCCAATTAAGAAGCAAACATCATAT
____________________________________________________________
consensus TTTTTTTTTTACCAATTAAGAAGCAAACATCATAT
. : . : . : . : . : . :
JMFF028P09+ TGAATCTCAAGTCTTACAGGTTAATAATCACT-GTAATGGCAATAGTAATGACTCAAAAC
JMSF042E05+ TGAATCTCAAGTCTTACAGGTTAATAATCACT-GTAATGGCAATAGTAATGACTCAAAAC
JMSF013H14+ TGAATCTCAAGTCTTACAGGTTAATAATCACT-GTAATGGCAATAGTAATGACTCAAAAC
JMFF010G21+ TGAATCTCAAGTCTTACAGGTTAATAATCACT-GTAATGGCAATAGTAATGACTCAAAAC
rJMFF028P09- TGAATCTCAAGTCTTACAGGTTAATAATCACT-GTAATGGCAATAGTAATGACTCAAAAC
JMFF010G10+ TGAATCTCAAGTCTTACAGGTTAATAATCACT-GTAATGGCAATAGTAATGACTCAAAAC
rJMFF010G10- AGTCTTACAGGTTAATAATCACT-GTAATGGCAATAGTAATGACTCAAAAC
rJMSF042E05- AGTCTTACAGGTTAATAATCACTGGTAATGGCAATAGTAATGACTCAAAAC
rJMSF013H14- GTAATGGCAATAGTAATGACTCAAAAC
JMSF045A02+ TGAATCTCAAGTCTTACAGGTTAATAATCACT-GTAATGGCAATAGTAATGACTCAAAAC
____________________________________________________________
consensus TGAATCTCAAGTCTTACAGGTTAATAATCACT-GTAATGGCAATAGTAATGACTCAAAAC
. : . : . : . : . : . :
JMFF028P09+ TAAAAACCAAGTTCCGAAACTCAACAAAAATGACAGGGAAATGAACAAGCTTTCTAAGGC
JMSF042E05+ TAAAAACCAAGTTCCGAAACTCAACAAAAATGACAGGGAAATGAACAAGCTTTCTAAGGC
JMSF013H14+ TAAAAACCAAGTTCCGAAACTCAACAAAAATGACAGGGAAATGAACAAGCTTTCTAAGGC
JMFF010G21+ TAAAAACCAAGTTCCGAAACTCAACAAAAATGACAGGGAAATGAACAAGCTTTCTAAGGC
rJMFF028P09- TAAAAACCAAGTTCCGAAACTCAACAAAAATGACAGGGAAATGAACAAGCTTTCTAAGGC
rJMFF010G21- ATGACAGGNAAATGAACAAGCTTTCTAAGGC
JMFF010G10+ TAAAAACCAAGTTCCGAAACTCAACAAAAATGACAGGGAAATGAACAAGCTTTCTAAGGC
rJMFF010G10- TAAAAACCAAGTTCCGAAACTCAACAAAAATGACAGGGAAATGAACAAGCTTTCTAAGGC
rJMSF042E05- TAAAAACCAAGTTCCGAAACTCAACAAAAATGACAGGGAAATGAACAAGCTTTCTAAGGC
rJMSF013H14- TAAAAACCAAGTTCCGAAACTCAACAAAAATGACAGGGAAATGAACAAGCTTTCTAAGGC
JMSF045A02+ TAAAAACCAAGTTCCGAAACTCAACAAAAATGACAGGGAAATGAACAAGCTTTCTAAGGC
____________________________________________________________
consensus TAAAAACCAAGTTCCGAAACTCAACAAAAATGACAGGGAAATGAACAAGCTTTCTAAGGC
. : . : . : . : . : . :
JMFF028P09+ TTTGGCATCGAGTAAGTGGACAGTATCCTCAAAACCCGAGCTTGGTACGGCGCCAATGGC
JMSF042E05+ TTTGGCATCGAGTAAGTGGACAGTATCCTCAAAACCCGAGCTTGGTACGGCGCCAATGGC
JMSF013H14+ TTTGGCATCGAGTAAGTGGACAGTATCCTCAAAACCCGAGCTTGGTACGGCGCCAATGGC
JMFF010G21+ TTTGGCATCGAGTAAGTGGACAGTATCCTCAAAACCCGAGCTTGGTACGGCGCCAATGGC
rJMFF028P09- TTTGGCATCGAGTAAGTGGACAGTATCCTCAAAACCCGAGCTTGGTACGGCGCCAATGGC
rJMFF010G21- TTTGGCATCGAGTAAGTGGACAGTATCCTCAAAACCCGAGCTTGGTACGGCGCCNATGGC
JMFF010G10+ TTTGGCATCGAGTAAGTGGACAGTATCCTCAAAACCCGAGCTTGGTACGGCGCCAATGGC
rJMFF010G10- TTTGGCATCGAGTAAGTGGACAGTATCCTCAAAACCCGAGCTTGGTACGGCGCCAATGGC
rJMSF042E05- TTTGGCATCGAGTAAGTGGACAGTATCCTCAAAACCCGAGCTTGGTACGGCGCCAATGGC
rJMSF013H14- TTTGGCATCGAGTAAGTGGACAGTATCCTCAAAACCCGAGCTTGGTACGGCGCCAATGGC
JMSF045A02+ TTTGGCATCGAGTAAGTGGACAGTATCCTCAAAACCCGAGCTTGGTACGGCGCCAATGGC
____________________________________________________________
consensus TTTGGCATCGAGTAAGTGGACAGTATCCTCAAAACCCGAGCTTGGTACGGCGCCAATGGC
. : . : . : . : . : . :
JMFF028P09+ GACGCTTGGCGTTGTAGCGGATCGTATTGTCGGTGCGCATACGGATCCAGTAGGGGATTG
JMSF042E05+ GACGCTTGGCGTTGTAGCGGATCGTATTGTCGGTGCGCATACGGATCCAGTAGGGGATTG
JMSF013H14+ GACGCTTGGCGTTGTAGCGGATCGTATTGTCGGTGCGCATACGGATCCAGTAGGGGATTG
JMFF010G21+ GACGCTTGGCGTTGTAGCGGATCGTATTGTCGGTGCGCATACGGATCCAGTAGGGGATTG
rJMFF028P09- GACGCTTGGCGTTGTAGCGGATCGTATTGTCGGTGCGCATACGGATCCAGTAGGGGATTG
rJMFF010G21- GACGCTTGGCGTTGTAGCGGATCGTATTGTCGGTGCGCATACGGATCCAGTAGGGGATTG
JMFF010G10+ GACGCTTGGCGTTGTAGCGGATCGTATTGTCGGTGCGCATACGGATCCAGTAGGGGATTG
rJMFF010G10- GACGCTTGGCGTTGTAGCGGATCGTATTGTCGGTGCGCATACGGATCCAGTAGGGGATTG
rJMSF042E05- GACGCTTGGCGTTGTAGCGGATCGTATTGTCGGTGCGCATACGGATCCAGTAGGGGATTG
rJMSF013H14- GACGCTTGGCGTTGTAGCGGATCGTATTGTCGGTGCGCATACGGATCCAGTAGGGGATTG
JMSF045A02+ GACGCTTGGCGTTGTAGCGGATCGTATTGTCGGTGCGCATACGGATCCAGTAGGGGATTG
____________________________________________________________
consensus GACGCTTGGCGTTGTAGCGGATCGTATTGTCGGTGCGCATACGGATCCAGTAGGGGATTG
. : . : . : . : . : . :
JMFF028P09+ GCCTGTTCTGCCTCTGCTTCTTCGCCAGCTTCTTCTTTATCATGAATGTCTTGTGCGACG
JMSF042E05+ GCCTGTTCTGCCTCTGCTTCTTCGCCAGCTTCTTCTTTATCATGAATGTCTTGTGCGACG
JMSF013H14+ GCCTGTTCTGCCTCTGCTTCTTCGCCAGCTTCTTCTTTATCATGAATGTCTTGTGCGACG
JMFF010G21+ GCCTGTTCTGCCTCTGCTTCTTCGCCAGCTTCTTCTTTATCATGAATGTCTTGTGCGACG
rJMFF028P09- GCCTGTTCTGCCTCTGCTTCTTCGCCAGCTTCTTCTTTATCATGAATGTCTTGTGCGACG
rJMFF010G21- GCCTGTTCTGCCTCTGCTTCTTCGCCAGCTTCTTCTTTATCATGAATGTCTTGTGCGACG
JMFF010G10+ GCCTGTTCTGCCTCTGCTTCTTCGCCAGCTTCTTCTTTATCATGAATGTCTTGTGCGACG
rJMFF010G10- GCCTGTTCTGCCTCTGCTTCTTCGCCAGCTTCTTCTTTATCATGAATGTCTTGTGCGACG
rJMSF042E05- GCCTGTTCTGCCTCTGCTTCTTCGCCAGCTTCTTCTTTATCATGAATGTCTTGTGCGACG
rJMSF013H14- GCCTGTTCTGCCTCTGCTTCTTCGCCAGCTTCTTCTTTATCATGAATGTCTTGTGCGACG
JMSF045A02+ GCCTGTTCTGCCTCTGCTTCTTCGCCAGCTTCTTCTTTATCATGAATGTCTTGTGCGACG
____________________________________________________________
consensus GCCTGTTCTGCCTCTGCTTCTTCGCCAGCTTCTTCTTTATCATGAATGTCTTGTGCGACG
. : . : . : . : . : . :
JMFF028P09+ GCATTTTCGCTTCTGCTTGAAAACTCTGCGATTAGGGCTCTGAGAAGTGGCGGAAAC
JMSF042E05+ GCATTTTCGCTTCTGCTTGAAAACTCTGCGATTAGGGCTCTGAGAAGTGGCGGAAAC
JMSF013H14+ GCATTTTCGCTTCTGCTTGAAAACTCTGCGATTAGGGCTCTGAGAAGTGGCGGAAAC
JMFF010G21+ GCATTTTCGCTTCTGCTTGAAAACTCTGCGATTAGGGCTGTGAGAAGTGGCGGAAAC
rJMFF028P09- GCATTTTCGCTTCTGCTTGAAAACTCTGCGATTAGGGCTCTGAGAAGTGGCGGAAAC
rJMFF010G21- GCATTTTCGCTTCTGCTTGAAAACTCTGCGATTAGGGCTCTGAGAAGTGGCGGAAAC
JMFF010G10+ GCATTTTCGCTTCTGCTTGAAAACTCTGCGATTAGGGCTCTGAGAAGTGGCGGAAAC
rJMFF010G10- GCATTTTCGCTTCTGCTTGAAAACTCTGCGATTAGGGCTCTGAGAAGTGGCGGAAAC
rJMSF042E05- GCATTTTCGCTTCTGCTTGAAAACTCTGCGATTAGGGCTCTGAGAAGTGGCGGAAAC
rJMSF013H14- GCATTTTCGCTTCTGCTTGAAAACTCTGCGATTAGGGCTCTGAGAAGTGGCGGAAAC
JMSF045A02+ GCATTTTCGCTTCTGCTTGAAAACTCTGCGATTAGGGCTCTGAGAAGTGGCGGAAACATC
____________________________________________________________
consensus GCATTTTCGCTTCTGCTTGAAAACTCTGCGATTAGGGCTCTGAGAAGTGGCGGAAACATC