Contig 005260:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013H03Sequence590005260 (5)ref|XP_011038086.1|2e-50PREDICTED: subtilisin-like protease SBT3.5 [Populus euphratica]678001463 (4)ref|XP_006365013.1|4e-90PREDICTED: subtilisin-like protease-like [Solanum tuberosum]
JMFS154F09Sequence626005260 (5)ref|XP_006370742.1|5e-63hypothetical protein POPTR_0001s460001g, partial [Populus trichocarpa] gb|ERP673
JMSF019I04Sequence257005260 (5)ref|XP_004509477.1|3e-14PREDICTED: subtilisin-like protease SDD1-like isoform X1 [Cicer arietinum]756001463 (4)ref|XP_006365013.1|6e-105PREDICTED: subtilisin-like protease-like [Solanum tuberosum]
JMSF019O10Sequence346005260 (5)787001463 (4)ref|XP_006365013.1|1e-113PREDICTED: subtilisin-like protease-like [Solanum tuberosum]
JMSF043K05Sequence669005260 (5)ref|XP_006370742.1|3e-69hypothetical protein POPTR_0001s460001g, partial [Populus trichocarpa] gb|ERP673827001463 (4)ref|XP_006365013.1|2e-110PREDICTED: subtilisin-like protease-like [Solanum tuberosum]

Alignment

This contig is upended


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JMSF043K05+                                                              TTCAGGCCA
                      ____________________________________________________________
consensus                                                                TTCAGGCCA
 
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JMFS154F09+                       AATAAACCCGATTACGATATTGACTTGGTTCTTGGTAGAAAACCCAGG
JMFF013H03+             TCCCTGTATCAATAAACCCGATTACGATATTGACTTGGTTCTTGGTAGAAAACCCAGG
JMSF043K05+           AATCCCTGTATCAATAAACCCGATTACGATATTGACTTGGTTCTTGGTAGAAAACCCAGG
                      ____________________________________________________________
consensus             AATCCCTGTATCAATAAACCCGATTACGATATTGACTTGGTTCTTGGTAGAAAACCCAGG
 
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JMFS154F09+           AATTTCCATGGTTTCTTCACCATTAAGCCCGATGAAATCCCAGGAATGAGTCGTGTGCAG
JMFF013H03+           AATTTCCATGGTTTCTTCACCATTAAGCCCGATGAAATCCCAGGAATGAGTCGTGTGCAG
JMSF043K05+           AATTTCCATGGTTTCTTCACCATTAAGCCCGATGAAATCCCAGGAATGAGTCGTGTGCAG
                      ____________________________________________________________
consensus             AATTTCCATGGTTTCTTCACCATTAAGCCCGATGAAATCCCAGGAATGAGTCGTGTGCAG
 
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JMFS154F09+           CATCCTCTTAGAATTAGGAAAAACCGAGACCACTCCAGGCATTTTGGAAATTTCAGAGGC
JMFF013H03+           CATCCTCTTAGAATTAGGAAAAACCGAGACCACTCCAGGCATTTTGGAAATTTCAGAGGC
JMSF043K05+           CATCCTCTTAGAATTAGGAAAAACCGAGACCACTCCAGGCATTTTGGAAATTTCAGAGGC
                      ____________________________________________________________
consensus             CATCCTCTTAGAATTAGGAAAAACCGAGACCACTCCAGGCATTTTGGAAATTTCAGAGGC
 
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JMFS154F09+           CTGTTCATCTGTCAACCTGGCTGCAAACCCATTGAAACCATGCTTGTAACTGTACACATG
JMFF013H03+           CTGTTCATCTGTCAACCTGGCTGCAAACCCATTGAAACCATGCTTGTAACTGTACACATG
JMSF019I04+                                                               TACACATG
JMSF043K05+           CTGTTCATCTGTCAACCTGGCTGCAAACCCATTGAAACCATGCTTGTAACTGTACACATG
                      ____________________________________________________________
consensus             CTGTTCATCTGTCAACCTGGCTGCAAACCCATTGAAACCATGCTTGTAACTGTACACATG
 
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JMFS154F09+           AGAAGCCATAGCTTCCTCAACACTTCCTCCATGGATAGAAGCTAGCATGTAGTGGTGTTG
JMFF013H03+           AGAAGCCATAGCTT-CTCAACACTTCCTCCATGGATAGAAGCTAGCATGTAGTGGTGTTG
JMSF019I04+           AGAAGCCATAGCTTCCTCAACACTTCCTCCATGGATAGAAGCTAGCATGTAGTGGTGTTG
JMSF043K05+           AGAAGCCATAGCTTCCTCAACACTTCCTCCATGGATAGAAGCTAGCATGTAGTGGTGTTG
                      ____________________________________________________________
consensus             AGAAGCCATAGCTTCCTCAACACTTCCTCCATGGATAGAAGCTAGCATGTAGTGGTGTTG
 
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JMFS154F09+           CTTCAGAATCCCTTCTGGGTCCTCGCCGCTCCCTTTGCTTCCCATGTAGACGACATACAA
JMFF013H03+           CTTCAGAATCCCTTCTGGGTCCTCGCCGCTCCCTTTGCTTCCCATGTAGACGACATACAA
JMSF019O10+                         CTGGGTCCTCGCCGCTCCCTTTGCTTCCCATGTAGACGACATACAA
JMSF019I04+           CTTCAGAATCCCTTCTGGGTCCTCGCCGCTCCCTTTGCTTCCCATGTAGACGACATACAA
JMSF043K05+           CTTCAGAATCCCTTCTGGGTCCTCGCCGCTCCCTTTGCTTCCCATGTAGACGACATACAA
                      ____________________________________________________________
consensus             CTTCAGAATCCCTTCTGGGTCCTCGCCGCTCCCTTTGCTTCCCATGTAGACGACATACAA
 
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JMFS154F09+           CTTGGAAGAAAGGGATAGGCTAATCTGGGCAAGAAAAACACAAAGAAAAAGGAAAAAGGC
JMFF013H03+           CTTGGAAGAAAGGGATAGGCTAATCTGGGCAAGAAAAACACAAAGAAAAAGGAAAAAGGC
JMSF019O10+           CTTGGAAGAAAGGGATAGGCTAATCTGGGCAAGAAAAACACAAAGAAAAAGGAAAAAGGC
JMSF019I04+           CTTGGAAGAAAGGGATAGGCTAATCTGGGCAAGAAAAACACAAAGAAAAAGGAAAAAGGC
JMSF043K05+           CTTGGAAGAAAGGGATAGGCTAATCTGGGCAAGAAAAACACAAAGAAAAAGGAAAAAGGC
                      ____________________________________________________________
consensus             CTTGGAAGAAAGGGATAGGCTAATCTGGGCAAGAAAAACACAAAGAAAAAGGAAAAAGGC
 
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JMFS154F09+           ATTCTTTTTGGGAAAACTCAAGGAACCCATTGTCCAATGGCTGCCTGAAGCTATGAGAAA
JMFF013H03+           ATTCTTTTTGGGAAAACTCAAGGAACCCATTGTCCAATGGCTGCCTGAAGCTATGAGAAA
JMSF019O10+           ATTCTTTTTGGGAAAACTCAAGGAACCCATTGTCCAATGGCTGCCTGAAGCTATGAGAAA
JMSF019I04+           ATTCTTTTTGGGAAAACTCAAGGAACCCATTGTCCAATGGCTGCCTGAAGCTATGAGAAA
JMSF043K05+           ATTCTTTTTGGGAAAACTCAAGGAACCCATTGTCCAATGGCTGCCTGAAGCTATGAGAAA
                      ____________________________________________________________
consensus             ATTCTTTTTGGGAAAACTCAAGGAACCCATTGTCCAATGGCTGCCTGAAGCTATGAGAAA
 
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JMFS154F09+           TGGCAGAGTGGATGTTCGGAGAAAAAGATGATGTTTTTATAGGAAGAGAATTGGGTGAAA
JMFF013H03+           TGGCAGAGTGGATGTTCGGAGAAAAAGATGATGTTTTTATAGGAAGAGAATTGGGTGAAA
JMSF019O10+           TGGCAGAGTGGATGTTCGGAGAAAAAGATGATGTTTTTATAGGAAGAGAATTGGGTGAAA
JMSF019I04+           TGGCAGAG                                                    
JMSF043K05+           TGGCAGAGTGGATGTTCGGAGAAAAAGATGATGTTTTTATAGGAAGAGAATTGGGTGAAA
                      ____________________________________________________________
consensus             TGGCAGAGTGGATGTTCGGAGAAAAAGATGATGTTTTTATAGGAAGAGAATTGGGTGAAA
 
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JMFS154F09+           TAAAGAGGAGAGAGAGAAGAGAGGGGGAAAATGTTCTGCTTCACAGGTATACTGTGTTAT
JMFF013H03+           TAAAGAGGAGAGAGAGAAGAGAGGGGGAAAATGTTCTG                      
JMSF019O10+           TAAAGAGGAGAGAGAGAAGAGAGGGGGAAAATGTTCTGCTTCACAGGTATACTGTGTTAT
JMSF043K05+           TAAAGAGGAGAGAGAGAAGAGAGGGGGAAAATGTTCTGCTTCACAGGTATACTGTGTTAT
                      ____________________________________________________________
consensus             TAAAGAGGAGAGAGAGAAGAGAGGGGGAAAATGTTCTGCTTCACAGGTATACTGTGTTAT
 
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JMFS154F09+           ACTCTCTCTCTGTGTCATAGTTGGGAAGAGATTTGATT                      
JMSF019O10+           ACTCTCTCTCTGTGTCATAGTTGGGAAGAGATTTGATTTGTAAGAAAAGACTGAAACGTC
JMSF043K05+           ACTCTCTCTCTGTGTCATAGTTGGGAAGAGATTTGATTTGTAAGAAAAGACTGAAACGTC
                      ____________________________________________________________
consensus             ACTCTCTCTCTGTGTCATAGTTGGGAAGAGATTTGATTTGTAAGAAAAGACTGAAACGTC