Contig 005242:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021G15Sequence526005242 (5)ref|XP_009766829.1|249PREDICTED: mannose-6-phosphate isomerase 1-like [Nicotiana sylvestris]731006862 (7)ref|XP_009618411.1|322PREDICTED: mannose-6-phosphate isomerase 1-like [Nicotiana tomentosiformis]
JMFF024I11Sequence348005242 (5)ref|XP_011097180.1|5e-41PREDICTED: mannose-6-phosphate isomerase 1 isoform X2 [Sesamum indicum]750006862 (7)ref|XP_009618411.1|326PREDICTED: mannose-6-phosphate isomerase 1-like [Nicotiana tomentosiformis]
JMFF025E05Sequence580005242 (5)ref|XP_009766829.1|234PREDICTED: mannose-6-phosphate isomerase 1-like [Nicotiana sylvestris]370006862 (7)ref|XP_009618411.1|89.4PREDICTED: mannose-6-phosphate isomerase 1-like [Nicotiana tomentosiformis]
JMFF047J04Sequence500005242 (5)ref|XP_009383606.1|80.1PREDICTED: mannose-6-phosphate isomerase 1-like [Musa acuminata subsp. malaccen462006862 (7)ref|XP_009618411.1|149PREDICTED: mannose-6-phosphate isomerase 1-like [Nicotiana tomentosiformis]
JMSF040M03Sequence626005242 (5)ref|XP_009591548.1|104PREDICTED: mannose-6-phosphate isomerase 1-like [Nicotiana tomentosiformis]918006862 (7)ref|XP_009618411.1|359PREDICTED: mannose-6-phosphate isomerase 1-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFF021G15+               CGGGCACTGTTTGTAAAACAACCTTCAGTTCCCCAAAACTGACGAATCCACATAGA
JMFF025E05+                                                           AATCCACATAGA
                      ____________________________________________________________
consensus                 CGGGCACTGTTTGTAAAACAACCTTCAGTTCCCCAAAACTGACGAATCCACATAGA
 
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JMFF021G15+           GCCTCAAAGGGAGTAAGTGCCAGAGTCATCTCAGGCTTGTGATTACTGTCTTTATATACT
JMFF025E05+           GCCTCAAAGGGAGTAAGTGCCAGAGTCATCTCAGGCTTGTGATTACTGTCTTTATATACT
                      ____________________________________________________________
consensus             GCCTCAAAGGGAGTAAGTGCCAGAGTCATCTCAGGCTTGTGATTACTGTCTTTATATACT
 
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JMFF021G15+           AGAGGTTGCTCCTTGTGCAGGCAAGCAGCCAAATCCTTATCAGGGTGAGCCTGAATCGAC
JMFF025E05+           AGAGGTTGCTCCTTGTGCAGGCAAGCAGCCAAATCCTTATCAGGGTGAGCCTGAATCGAC
                      ____________________________________________________________
consensus             AGAGGTTGCTCCTTGTGCAGGCAAGCAGCCAAATCCTTATCAGGGTGAGCCTGAATCGAC
 
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JMFF021G15+           AACGCTTTTGCAATTGAGAGTACCTTGAAAAGGAATGGAAGATCGGGGCCCCACTTCTTA
JMFF024I11+                TTTTGCAATTGAGAGTACCTTGAAAAGGAATGGAAGATCGGGGCCCCACTTNTTA
JMFF025E05+           AACGCTTTTGCAATTGAGAGTACCTTGAAAAGGAATGGAAGATCGGGGCCCCACTTCTTA
                      ____________________________________________________________
consensus             AACGCTTTTGCAATTGAGAGTACCTTGAAAAGGAATGGAAGATCGGGGCCCCACTTCTTA
 
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JMFF021G15+           AGAACCTTATCACCGAGGACACTAGGGTTCCGGCGAATCCAATCCTTGAGAGTGACTACA
JMFF024I11+           AGAACCTTATCACCGAGGACANTAGGGTTCCGGCGAATCCAATCCTTGAGAGTGACTACA
JMFF025E05+           AGAACCTTATCACCGAGGACACTAGGGTTCCGGCGAATCCAATCCTTGAGAGTGACTACA
JMSF040M03+                                             GAATCCAATCCTTGAGAGTGACTACA
                      ____________________________________________________________
consensus             AGAACCTTATCACCGAGGACACTAGGGTTCCGGCGAATCCAATCCTTGAGAGTGACTACA
 
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JMFF021G15+           AATTTGTCTTTCGCCACACCATTCGACAATCCATTCCCGGCTATTCTCCCCGGCGGCGGT
JMFF024I11+           AATTTGTCTTTCGCCACACCATTCGACAATCCATTCCCGGCTATTCTCCCCGGCGGCGGT
JMFF025E05+           AATTTGTCTTTCGCCACACCATTCGACAATCCATTCCCGGCTATTCTCCCCGGCGGCGGT
JMSF040M03+           AATTTGTCTTTCGCCACACCATTCGACAATCCATTCCCGGCTATTCTCCCCGGCGGCGGT
                      ____________________________________________________________
consensus             AATTTGTCTTTCGCCACACCATTCGACAATCCATTCCCGGCTATTCTCCCCGGCGGCGGT
 
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JMFF021G15+           GCTCCTCCCACCACGACATACGACGGCCCGGACTCGTGCGTCCCCATCCAGAACTCCGCG
JMFF024I11+           GCTCCTCCCACCACGACATACGACGGCCCGGACTCGTGCGTCCCCATCCAGAACTCCGCG
JMFF025E05+           GCTCCTCCCACCACGACATACGACGGCCCGGACTCGTGCGTCCCCATCCAGAACTCCGCG
JMFF047J04+                                                  GTCCCCATCCAGAACTCCGCG
JMSF040M03+           GCTCCTCCCACCACGACATACGACGGCCCGGACTCGTGCGTCCCCATCCAGAACTCCGCG
                      ____________________________________________________________
consensus             GCTCCTCCCACCACGACATACGACGGCCCGGACTCGTGCGTCCCCATCCAGAACTCCGCG
 
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JMFF021G15+           TAGGGCTTCCCTTCCTGAATCTCGTCGCCAGTGTTGCGGGAGTAGAGCCGCGCCACACCG
JMFF024I11+           TAGGGCTTCCCTTCCTGAATCTCGTCGCCAGTGTTGCGGGAGTAGAGCCGCGCCACACCG
JMFF025E05+           TAGGGCTTCCCTTCCTGAATCTCGTCGCCAGTGTTGCGGGAGTAGAGCCGCGCCACACCG
JMFF047J04+           TAGGGCTTCCCTTCCTGAATCTCGTCGCCAGTGTTGCGGGAGTAGAGCCGCGCCACACCG
JMSF040M03+           TAGGGCTTCCCTTCCTGAATCTCGTCGCCAGTGTTGCGGGAGTAGAGCCGCGCCACACCG
                      ____________________________________________________________
consensus             TAGGGCTTCCCTTCCTGAATCTCGTCGCCAGTGTTGCGGGAGTAGAGCCGCGCCACACCG
 
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JMFF021G15+           GATTCCCGCCCAATGCGGCCCCAATCGTAATTCTTAACCGCACACC              
JMFF024I11+           GATTCCCGCCCAATGCGGCCCCAATCGTAANTCTTAACCGCACACCTGAG          
JMFF025E05+           GATTCCCGCCCAATGCGGCCCCAATCGTAATTCTTAACCGCACACCTGAGCCTCAACAAC
JMFF047J04+           GATTCCCGCCCAATGCGGCCCCAATCGTAATTCTTAACCGCACACCTGAGCCTCAACAAC
JMSF040M03+           GATTCCCGCCCAATGCGGCCCCAATCGTAATTCTTAACCGCACACCTGAGCCTCAACAAC
                      ____________________________________________________________
consensus             GATTCCCGCCCAATGCGGCCCCAATCGTAATTCTTAACCGCACACCTGAGCCTCAACAAC
 
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JMFF025E05+           GCCCCACCCGTCCCCGCCGCCGGAACCCCATCAACCTCCATGGACTTGCCTCCAGTCTGG
JMFF047J04+           GCCCCACCCGTCCCCGCCGCCGGAACCCCATCAACCTCCATGGACTTGCCTCCAGTCTGG
JMSF040M03+           GCCCCACCCGTCCCCGCCGCCGGAACCCCATCAACCTCCATGGACTTGCCTCCAGTCTGG
                      ____________________________________________________________
consensus             GCCCCACCCGTCCCCGCCGCCGGAACCCCATCAACCTCCATGGACTTGCCTCCAGTCTGG
 
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JMFF025E05+           ACACAGAGTATAAGCAAACCAGAAC                                   
JMFF047J04+           ACACAGAGTATAAGCAAACCAGAACTGTGAATCCAGGCGCTCAAAATTAACAAATATATA
JMSF040M03+           ACACAGAGTATAAGCAAACCAGAACTGTGAATCCAGGCGCTCAAAATTAACAAATATATA
                      ____________________________________________________________
consensus             ACACAGAGTATAAGCAAACCAGAACTGTGAATCCAGGCGCTCAAAATTAACAAATATATA
 
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JMFF047J04+           ACCCAATTATAACTAAAACGACAAATTGAATTTTCTGTGAACAGGGACAAATTTTCTGTG
JMSF040M03+           ACCCAATTATAACTAAAACGACAAATTGAATTTTCTGTGAACAGGGACAAATTTTCTGTG
                      ____________________________________________________________
consensus             ACCCAATTATAACTAAAACGACAAATTGAATTTTCTGTGAACAGGGACAAATTTTCTGTG
 
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JMFF047J04+           AACAGGGACGAGAACGACTGGTTTCTGAAAGTGGACAATCGCGAGGGAAAGCGCATGTGA
JMSF040M03+           AACAGGGACGAGAACGACTGGTTTCTGAAAGTGGACAATCGCGAGGGAAAGCGCATGTGA
                      ____________________________________________________________
consensus             AACAGGGACGAGAACGACTGGTTTCTGAAAGTGGACAATCGCGAGGGAAAGCGCATGTGA
 
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JMFF047J04+           GGGAGATAGAAATTGACGTTATCGTCGCCGGATAAAGGAGGCAGGGATGGCGACGGCGGA
JMSF040M03+           GGGAGATAGAAATTGACGTTATCGTCGCCGGATAAAGGAGGCAGGGATGGCGACGGCGGA
                      ____________________________________________________________
consensus             GGGAGATAGAAATTGACGTTATCGTCGCCGGATAAAGGAGGCAGGGATGGCGACGGCGGA
 
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JMFF047J04+           ATGACGCCACGCGATTGATGATCGCGGTCGGTGGCGTTGTCGTCAGTTCACTCCACCGC 
JMSF040M03+           ATGACGCCACGCGATTGATGATCGCGGTCGGTGGCGTTGTCGTCAGTTCACTCCACCGCC
                      ____________________________________________________________
consensus             ATGACGCCACGCGATTGATGATCGCGGTCGGTGGCGTTGTCGTCAGTTCACTCCACCGCC