clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF020C05 | Sequence | 560 | 005237 (7) | ref|XP_011082888.1| | 2e-18 | PREDICTED: telomeric repeat-binding factor 1-like [Sesamum indicum] ref|XP_01108 | 734 | 007194 (16) | ref|XP_010657505.1| | 104 | PREDICTED: uncharacterized protein LOC104880931 [Vitis vinifera] ref|XP_01065750 |
JMFF031B08 | Sequence | 523 | 005237 (7) | ref|XP_006366758.1| | 2e-10 | PREDICTED: uncharacterized protein LOC102601593 isoform X1 [Solanum tuberosum] | 628 | 007194 (16) | ref|XP_008462017.1| | 3e-18 | PREDICTED: uncharacterized protein LOC103500488 isoform X2 [Cucumis melo] |
JMSF026O22 | Sequence | 651 | 005237 (7) | ref|XP_011082888.1| | 9e-25 | PREDICTED: telomeric repeat-binding factor 1-like [Sesamum indicum] ref|XP_01108 | 785 | 007194 (16) | ref|XP_009597431.1| | 120 | PREDICTED: uncharacterized protein LOC104093402 [Nicotiana tomentosiformis] |
JMSF028N14 | Sequence | 664 | 005237 (7) | ref|XP_011082888.1| | 8e-25 | PREDICTED: telomeric repeat-binding factor 1-like [Sesamum indicum] ref|XP_01108 | 752 | 022570 | |||
JMSF039P01 | Sequence | 646 | 005237 (7) | ref|XP_004243220.1| | 125 | PREDICTED: uncharacterized protein LOC101252503 [Solanum lycopersicum] | 982 | 007194 (16) | ref|XP_009597431.1| | 120 | PREDICTED: uncharacterized protein LOC104093402 [Nicotiana tomentosiformis] |
JMSF040D02 | Sequence | 704 | 005237 (7) | ref|XP_004243220.1| | 117 | PREDICTED: uncharacterized protein LOC101252503 [Solanum lycopersicum] | 863 | 005237 (7) |
This contig is upended
. : . : . : . : . : . :
rJMSF040D02- GTGC
____________________________________________________________
consensus GTGC
. : . : . : . : . : . :
rJMSF040D02- CTCAAATTCTCTAGATATTGAAGCACCAGNTTTCAACCCTTCTCTTGGCTTTCAAATGCA
____________________________________________________________
consensus CTCAAATTCTCTAGATATTGAAGCACCAGNTTTCAACCCTTCTCTTGGCTTTCAAATGCA
. : . : . : . : . : . :
rJMSF040D02- ACTGGGGTTCAGGTTCTTCATTCATGAAGGATGCTGCAGATTCATGTGCTTTTCCCTGCA
____________________________________________________________
consensus ACTGGGGTTCAGGTTCTTCATTCATGAAGGATGCTGCAGATTCATGTGCTTTTCCCTGCA
. : . : . : . : . : . :
rJMSF040D02- TCTGGTCAGCTTTTGCACCACCACCATTTTCATTTTCCTTCCTGCCAGCTTGCATTTGTG
____________________________________________________________
consensus TCTGGTCAGCTTTTGCACCACCACCATTTTCATTTTCCTTCCTGCCAGCTTGCATTTGTG
. : . : . : . : . : . :
rJMSF040D02- CAGCTTTCTTCTTGATGTTCTCTTCTCTTTCAGGTATTTCTCTCAGGTGGCCATCTCCTT
____________________________________________________________
consensus CAGCTTTCTTCTTGATGTTCTCTTCTCTTTCAGGTATTTCTCTCAGGTGGCCATCTCCTT
. : . : . : . : . : . :
rJMSF040D02- GGCAATCTTCAACATCTCTATCCAGTCGTTGGTCATCAATCTCTGGTTCATTTTCTGCAA
____________________________________________________________
consensus GGCAATCTTCAACATCTCTATCCAGTCGTTGGTCATCAATCTCTGGTTCATTTTCTGCAA
. : . : . : . : . : . :
rJMSF040D02- GCATTTGATTTGCTTTTTTCCTAATTTTCTTTCCTCTATCAGGTGTCTCAGTCAGGTGGT
____________________________________________________________
consensus GCATTTGATTTGCTTTTTTCCTAATTTTCTTTCCTCTATCAGGTGTCTCAGTCAGGTGGT
. : . : . : . : . : . :
rJMSF040D02- CATCTTTTTTATGATCTTCAACACCTCTCTTTAGTTGAAGGTCATCAACCTCTGTTTCAT
____________________________________________________________
consensus CATCTTTTTTATGATCTTCAACACCTCTCTTTAGTTGAAGGTCATCAACCTCTGTTTCAT
. : . : . : . : . : . :
rJMSF040D02- TTTCTGCTCGCCTTTGTTTAGCTTTTTTCCTAATTTTCTTTTCTCTTTCGGGTATCTCAC
____________________________________________________________
consensus TTTCTGCTCGCCTTTGTTTAGCTTTTTTCCTAATTTTCTTTTCTCTTTCGGGTATCTCAC
. : . : . : . : . : . :
rJMSF040D02- TCAAGTGACCATCTTCTTGATGATCTTCAAAGTCTCTATCTAGCTGTTGGTCATCAGCCT
____________________________________________________________
consensus TCAAGTGACCATCTTCTTGATGATCTTCAAAGTCTCTATCTAGCTGTTGGTCATCAGCCT
. : . : . : . : . : . :
rJMSF040D02- CAGGTTCATTTTCTGCTAGCACTCGTTTAGCCTTTTTCCTAATTTTCTTTTCTCTTTCAC
____________________________________________________________
consensus CAGGTTCATTTTCTGCTAGCACTCGTTTAGCCTTTTTCCTAATTTTCTTTTCTCTTTCAC
. : . : . : . : . : . :
rJMSF040D02- GTATCTCACTCAGGTGGTCATCTTTTTTATGATCTTCAACACCTCTATCTAGTTGTTGGT
____________________________________________________________
consensus GTATCTCACTCAGGTGGTCATCTTTTTTATGATCTTCAACACCTCTATCTAGTTGTTGGT
. : . : . : . : . : . :
rJMSF040D02- CATCAGCCTCAGGTTCATTTTCTGCTAGCAATCGTTTAGCCTTTTTCCTAATTTTCTTTT
____________________________________________________________
consensus CATCAGCCTCAGGTTCATTTTCTGCTAGCAATCGTTTAGCCTTTTTCCTAATTTTCTTTT
. : . : . : . : . : . :
rJMSF040D02- CTCTTTCAGGTATCTCACTCGAGGGGCCATCTTCCTGACGATCTTCAACACCTCTATCTA
____________________________________________________________
consensus CTCTTTCAGGTATCTCACTCGAGGGGCCATCTTCCTGACGATCTTCAACACCTCTATCTA
. : . : . : . : . : . :
rJMSF040D02- TTTGTTGGTTANCAACCTCTGGTTCACGTTCTGNTTGCATCCCTTCGCTGACTTTATTGC
JMSF039P01+ TGGTTCACGTTCTGTTTGCATCCCTTCGCTGACTTTATTGC
____________________________________________________________
consensus TTTGTTGGTTANCAACCTCTGGTTCACGTTCTGTTTGCATCCCTTCGCTGACTTTATTGC
. : . : . : . : . : . :
rJMSF040D02- ATTTACTTTGCAAGAAACC
JMSF039P01+ ATTTACTTTGCAAGAAACCAGCACGTTCTTCAGGTGATGATTTGTCAGCCCTTTTTGATG
JMSF040D02+ ACCAGCACGTTCTTCAGGTGATGATTTGTCAGCCCTTTTGATGG
____________________________________________________________
consensus ATTTACTTTGCAAGAAACCAGCACGTTCTTCAGGTGATGATTTGTCAGCCCTTTTTGTTG
. : . : . : . : . : . :
JMSF039P01+ GTGATTTCCCCATAGATGGTTGCACTAGTTTGTCACCAATAGTCACTTCATTATCCAGAA
JMSF028N14+ TTTCCCCATAGATGGTTGCACTAGTTTGTCACCAATAGTCACTTCATTATCCAGAA
JMSF026O22+ CCATAGATGGTTGCACTAGTTTGTCACCAATAGTCACTTCATTATCCAGAA
JMSF040D02+ TGATTTTCCCCATAGATGGTTGCACTAGTTTGTCACCAATAGTCACTTCATTATCCAGAA
____________________________________________________________
consensus TTGTTTTCCCCATAGATGGTTGCACTAGTTTGTCACCAATAGTCACTTCATTATCCAGAA
. : . : . : . : . : . :
JMSF039P01+ AGCGGGACAGAGCTTGCTTTTTAAGCATAGCATCTTCCCTTGCTTTAAGTGATTCTGCAT
JMSF028N14+ AGCGGGACAGAGCTTGCTTTTTAAGCATAGCATCTTCCCTTGCTTTAAGTGATTCTGCAT
JMSF026O22+ AGCGGGACAGAGCTTGCTTTTTAAGCATAGCATCTTCCCTTGCTTTAAGTGATTCTGCAT
JMFF020C05+ TTGCTTTAAGTGATTCTGCAT
JMSF040D02+ AGCGGGACAGAGCTTGCTTTTTAAGCATAGCATCTTCCCTTGCTTTAAGTGATTCTGCAT
____________________________________________________________
consensus AGCGGGACAGAGCTTGCTTTTTAAGCATAGCATCTTCCCTTGCTTTAAGTGATTCTGCAT
. : . : . : . : . : . :
JMSF039P01+ TAGCTTGCCTATATAAACAGTATGGGCAATAAAAGTTTCCCCTGTCATCAAATTTAACTG
JMSF028N14+ TAGCTTGCCTATATAAACAGTATGGGCAATAAAAGTTTCCCCTGTCATCAAATTTAACTG
JMSF026O22+ TAGCTTGCCTATATAAACAGTATGGGCAATAAAAGTTTCCCCTGTCATCAAATTTAACTG
JMFF031B08+ TTTCCCCTGTCATCAAATNTAACTG
JMFF020C05+ TAGCTTGCCTATATAAACAGTATGGGCAATAAAAGTTTCCCCTGTCATCAAATTTAACTG
JMSF040D02+ TAGCTTGCCTATATAAACAGTATGGGCAATAAAAGTTTCCCCTGTCATCAAATTTAACTG
____________________________________________________________
consensus TAGCTTGCCTATATAAACAGTATGGGCAATAAAAGTTTCCCCTGTCATCAAATTTAACTG
. : . : . : . : . : . :
JMSF039P01+ GGCACCCCATGCACTCCTCATGAACAACTATAGGGCAGTTACTATCACTACAAACCAACA
JMSF028N14+ GGCACCCCATGCACTCCTCATGAACAACTATAGGGCAGTTACTATCACTACAAACCAACA
JMSF026O22+ GGCACCCCATGCACTCCTCATGAACAACTATAGGGCAGTTACTATCACTACAAACCAACA
JMFF031B08+ GGCACCCCATGCACTCCTCATGAACAACTATAGGGCAGTTACTATCACTACAAACCAACA
JMFF020C05+ GGCACCCCATGCACTCCTCATGAACAACTATAGGGCAGTTACTATCACTACAAACCAACA
JMSF040D02+ GGCACCCCATGCACTCCTCATGAACAACTATAGGGCAGTTACTATCACTACAAACCAACA
____________________________________________________________
consensus GGCACCCCATGCACTCCTCATGAACAACTATAGGGCAGTTACTATCACTACAAACCAACA
. : . : . : . : . : . :
JMSF039P01+ CCTTGCCACCTCTATCACACTTTATGCAAAATCCTCCTTTCTCTGGCCAACCCATTTCCT
JMSF028N14+ CCTTGCCACCTCTATCACACTTTATGCAAAATCCTCCTTTCTCTGGCCAACCCATTTCCT
JMSF026O22+ CCTTGCCACCTCTATCACACTTTATGCAAAATCCTCCTTTCTCTGGCCAACCCATTTCCT
JMFF031B08+ CCTTGCCACCTCTATCACACTTTATGCAAAATCCTCCTTTCTCTGGCCAACCCATTTCCT
JMFF020C05+ CCTTGCCACCTCTATCACACTTTATGCAAAATCCTCCTTTCTCTGGCCAACCCATTTCCT
JMSF040D02+ CCTTGCCACCTCTATCACACTTTATGCAAAATCCTCCTTTCTCTGGCCAACCCATTTCCT
____________________________________________________________
consensus CCTTGCCACCTCTATCACACTTTATGCAAAATCCTCCTTTCTCTGGCCAACCCATTTCCT
. : . : . : . : . : . :
JMSF039P01+ TGTTATTTTCCCGATTACTAATCTCCGTGCACATCTCTCTCACCACTTGAACACAGAACT
JMSF028N14+ TGTTATTTTCCCGATTACTAATCTCCGTGCACATCTCTCTCACCACTTGAACACAGAACT
JMSF026O22+ TGTTATTTTCCCGATTACTAATCTCCGTGCACATCTCTCTCACCACTTGAACACAGAACT
JMFF031B08+ TGTTATTTTCCCGATTACTAATCTCCGTGCACATCTCTCTCACCACTTGAACACAGAACT
JMFF020C05+ TGTTATTTTCCCGATTACTAATCTCCGTGCACATCTCTCTCACCACTTGAACACAGAACT
JMSF040D02+ TGTTATTTTCCCGATTACTAATCTCCGTGCACATCTCTCTCACCACTTGAACACAGAACT
____________________________________________________________
consensus TGTTATTTTCCCGATTACTAATCTCCGTGCACATCTCTCTCACCACTTGAACACAGAACT
. : . : . : . : . : . :
JMSF039P01+ CACATCTGAAACGCTACATGAGAGAGTCGCGATACGAGTCTGAGGCCGGCGGCAACGGCG
JMSF028N14+ CACATCTGAAACGCTACATGAGAGAGTCGCGATACGAGTCTGAGGCCGGCGGCAACGGCG
JMSF026O22+ CACATCTGAAACGCTACATGAGAGAGTCGCGATACGAGTCTGAGGCCGGCGGCAACGGCG
JMFF031B08+ CACATCTGAAACGCTACATGAGAGAGTCGCGATACGAGTCTGAGGCCGGCGGCAACGGCG
JMFF020C05+ CACATCTGAAACGCTACATGAGAGAGTCGCGATACGAGTCTGAGGCCGGCGGCAACGGCG
JMSF040D02+ CACATCTGAAACGCTACATGAGAGAGTCGCGATACGAGTCTGAGGCCGGCGGCAACGGCG
____________________________________________________________
consensus CACATCTGAAACGCTACATGAGAGAGTCGCGATACGAGTCTGAGGCCGGCGGCAACGGCG
. : . : . : . : . : . :
JMSF039P01+ GCGAAGAGCTCGAATCGAGTTCCGAACAACTCGG
JMSF028N14+ GCGAAGAGCTCGAATCGAGTTCCGAACAACTCGGCTGGAAATGGAAAAATGGTGAAGAAG
JMSF026O22+ GCGAAGAGCTCGAATCGAGTTCCGAACAACTCGGCTGGAAATGGAAAAATGGTGAAGAAG
JMFF031B08+ GCGAAGAGCTCGAATCGAGTTCCGAACAACTCGGCTGGAAATGGAAAAATGGTGAAGAAG
JMFF020C05+ GCGAAGAGCTCGAATCGAGTTCCGAACAACTCGGCTGGAAATGGAAAAATGGTGAAGAAG
JMSF040D02+ GCGAAGAGCTCGAATCGAGTTCCGAACAACTCGGCTGGAAATGGAAAAATGGTGAAGAAG
____________________________________________________________
consensus GCGAAGAGCTCGAATCGAGTTCCGAACAACTCGGCTGGAAATGGAAAAATGGTGAAGAAG
. : . : . : . : . : . :
JMSF028N14+ TAGGGTTTCCGTATGAGATTCAGCTATGAATTCGAGTTAAATAAACTGTGAAAAGCTTGA
JMSF026O22+ TAGGGTTTCCGTATGAGATTCAGCTATGAATTCGAGTTAAATAAACTGTGAAAAGCTTGA
JMFF031B08+ TAGGGTTTCCGTATGAGATTCAGCTATGAATTCGAGTTAAATAAACTGTGAAAAGCTTGA
JMFF020C05+ TAGGGTTTCCGTATGAGATTCAGCTATGAATTCGAGTTAAATAAACTGTGAAAAGCTTGA
JMSF040D02+ TAGGGTTTCCGTATGAGATTCAGCTATGAATTCGAGTTAAATAAACTGTGAAAAGCTTGA
____________________________________________________________
consensus TAGGGTTTCCGTATGAGATTCAGCTATGAATTCGAGTTAAATAAACTGTGAAAAGCTTGA
. : . : . : . : . : . :
JMSF028N14+ GTAGAAAGATTCGGAAACTCCATACATACACTATTTAACACTTATGGCTGATTTTTCCCT
JMSF026O22+ GTAGAAAGATTCGGAAACTCCATACATACACTATTTAACACTTATGGCTGATTTTTCCCT
JMFF031B08+ GTAGAAAGATTCGGAAACTCCATACATACACTATTTAACACTTATGGCTGATTTTTCCCT
JMFF020C05+ GTAGAAAGATTCGGAAACTCCATACATACACTATTTAACACTTATGGCTGATTTTTCCCT
JMSF040D02+ GTAGAAAGATTCGGAAACTCCATACATACACTATTTAACACTTATGGCTGATTTTTCCCT
____________________________________________________________
consensus GTAGAAAGATTCGGAAACTCCATACATACACTATTTAACACTTATGGCTGATTTTTCCCT
. : . : . : . : . : . :
JMSF028N14+ GCGAGACCAGAGAATTTGGAGTTTGGGAGGTCTCTTCCGCTTGGGATTTTGCAAAAAC
JMSF026O22+ GCGAGACCAGAGAATTTGGAGTTTGGGAGGTCTCTTCCGCTTGGGATTTTGCAAAAAC
JMFF031B08+ GCGAGACCAGAGAATTTGGAGTTTGGGAGGTCTCTTCCGCTTGGGATTTTGCAAAAA
JMFF020C05+ GCGAGACCAGAGAATTTGGAGTTTGGGAGGTCTCTTCCGCTTGGGATTTTGCAAAAAC
JMSF040D02+ GCGAGACCAGAGAATTTGGAGTTTGGGAGGTCTCTTCCGCTTGGGATTTTGCAAAAACTC
____________________________________________________________
consensus GCGAGACCAGAGAATTTGGAGTTTGGGAGGTCTCTTCCGCTTGGGATTTTGCAAAAACTC