Contig 005219:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF021O13+                                             CTGGTGATAGTATACTAATTCCATAG
                      ____________________________________________________________
consensus                                               CTGGTGATAGTATACTAATTCCATAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF021O13+           TGTTATTCCCCCTNAAGAATGTTTCAGCATACTTTGGGAAGTAGGGAAATGAATCTAAAT
                      ____________________________________________________________
consensus             TGTTATTCCCCCTNAAGAATGTTTCAGCATACTTTGGGAAGTAGGGAAATGAATCTAAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF021O13+           AAAAAGAAAAACACCACTGCTGATAGTATACTAAATCCAATAGTGTTATTCCCCCCTAAA
                      ____________________________________________________________
consensus             AAAAAGAAAAACACCACTGCTGATAGTATACTAAATCCAATAGTGTTATTCCCCCCTAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF021O13+           GAATGTTTCAGCATACTTTGGGAAGTAGGGAAGAGGAGCTAGGTCACCCGAAGGGTGAGG
                      ____________________________________________________________
consensus             GAATGTTTCAGCATACTTTGGGAAGTAGGGAAGAGGAGCTAGGTCACCCGAAGGGTGAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF021O13+           AAGGGAAGAAAAGCAAAGATATCTTACAGAAGAGTGTGTGGAAGGGAATCCTCCAGCCTG
                      ____________________________________________________________
consensus             AAGGGAAGAAAAGCAAAGATATCTTACAGAAGAGTGTGTGGAAGGGAATCCTCCAGCCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF021O13+           AAAGGCTGTCCTAATATCAAAATCATTGCCATAAAATACAGCTGATGTAAAAGGTTTGGA
                      ____________________________________________________________
consensus             AAAGGCTGTCCTAATATCAAAATCATTGCCATAAAATACAGCTGATGTAAAAGGTTTGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF021O13+           AAGTTGTCCAATTGCCGCAGAAAGAGCAGCAGCTATCAAAACCTTGTTGTGGATAATATC
rJMSF037O15-                                                                 ATATC
JMSF037O15+                                                   ACCTTGTTGTGGATAATATC
                      ____________________________________________________________
consensus             AAGTTGTCCAATTGCCGCAGAAAGAGCAGCAGCTATCAAAACCTTGTTGTGGATAATATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF021O13+           TGTGATTCCATCAACTCCATTGCCAAGGGATGCCAATTTGAAGGAATGCAAAGTGGAACA
rJMSF037O15-          TGTGATTCCNTCAACTCCGTTGCCGAGGGATGNCNATTTGAAGGAATGCAAAGTGGAACA
JMSF037O15+           TGTGATTCCATCAACTCCATTGCCAAGGGATGCCAATTTGAAGGAATGCAAAGTGGAACA
                      ____________________________________________________________
consensus             TGTGATTCCATCAACTCCATTGCCAAGGGATGCCAATTTGAAGGAATGCAAAGTGGAACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF021O13+           GCCTCCAGTTCCTTGTCTAGTAAAAGGATATGCTACCTTAAAGGCAATATTGTTAGGGCC
rJMSF037O15-          GCCTCCAGTTCCTTGTCTAGTAAAAGGATATGCTACCTTANAGGCAATATTGTTAGGGCC
JMSF037O15+           GCCTCCAGTTCCTTGTCTAGTAAAAGGATATGCTACCTTAAAGGCAATATTGTTAGGGCC
                      ____________________________________________________________
consensus             GCCTCCAGTTCCTTGTCTAGTAAAAGGATATGCTACCTTAAAGGCAATATTGTTAGGGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF021O13+           CCTTGATTCTGTGTGAAATGAACTCGTATGATTACGGGATGGTAAAGCACCCAGAAAGCC
rJMSF037O15-          CCTTGATTCTGTGTGAAATGAACTCGNATGATNACGGGATGGTANAGCACCCANAAANCC
JMSF037O15+           CCTTGATTCTGTGTGAAATGAACTCGTATGATTACGGGATGGTAAAGCACCCAGAAAGCC
                      ____________________________________________________________
consensus             CCTTGATTCTGTGTGAAATGAACTCGTATGATTACGGGATGGTAAAGCACCCAGAAAGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF021O13+           CAAACTCCGACTCAACAAGGCCATAGCTGGCTTCACCTATCTGCCTCTCCTCCGCATACA
rJMSF037O15-          CNANCTCCGACTCAACNAGGCCATANCTGGCTTCACCTATCNGCCTCNCCTCCGGATACA
JMSF037O15+           CAAACTCCGACTCAACAAGGCCATAGCTGGCTTCACCTATCTGCCTCTCCTCCGCATACA
                      ____________________________________________________________
consensus             CAAACTCCGACTCAACAAGGCCATAGCTGGCTTCACCTATCTGCCTCTCCTCCGCATACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF021O13+           CACATCAAAACTCTTTAGAGGATCTACAAAATTATCGGTATACTGATGGCCTGCGGTTGC
rJMSF037O15-          CACATCANAACTCTTTAGAGGATCTACNAAATTATCGNTANACTGATGGCCTGCGGTTGC
JMSF037O15+           CACATCAAAACTCTTTAGAGGATCTACAAAATTATCGGTATACTGATGGCCTGCGGTTGC
                      ____________________________________________________________
consensus             CACATCAAAACTCTTTAGAGGATCTACAAAATTATCGGTATACTGATGGCCTGCGGTTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF021O13+           GACTCCGCCGTTCAAGCCACGGCCGGCAGGATTAAGTACTTGAGTAGAGGGTAGGGAAAG
rJMSF037O15-          GACTCCGCCGTTCANGCCACGGCCGGCAGGATTAAGTACTTGAGTATAGGGTAGGGAAAG
JMSF037O15+           GACTCCGCCGTTCAAGCCACGGCCGGCAGGATTAAGTACTTGAGTAGAGGGTAGGGAAAG
                      ____________________________________________________________
consensus             GACTCCGCCGTTCAAGCCACGGCCGGCAGGATTAAGTACTTGAGTAGAGGGTAGGGAAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF021O13+           TTGACGATATACGATTAGATATACCTAT                                
rJMSF037O15-          TTGACGANATACGATTANATATACCTATNCACANAATTGGATGACAAATGTTCATGAACC
JMSF037O15+           TTGACGATATACGATTAGATATACCTATACACAGAATTGGATGACAAATGTTCATGAACC
                      ____________________________________________________________
consensus             TTGACGATATACGATTAGATATACCTATACACAGAATTGGATGACAAATGTTCATGAACC