| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF038P02 | Sequence | 624 | 005205 (6) | ref|XP_009618640.1| | 6e-69 | PREDICTED: U-box domain-containing protein 44 [Nicotiana tomentosiformis] | |||||
| JMFS136H06 | Sequence | 582 | 005205 (6) | ref|XP_009618640.1| | 2e-78 | PREDICTED: U-box domain-containing protein 44 [Nicotiana tomentosiformis] | |||||
| JMFS155G05 | Sequence | 620 | 005205 (6) | ref|XP_009618640.1| | 5e-63 | PREDICTED: U-box domain-containing protein 44 [Nicotiana tomentosiformis] | |||||
| JMFS162A07 | Sequence | 626 | 005205 (6) | ref|XP_009618640.1| | 6e-82 | PREDICTED: U-box domain-containing protein 44 [Nicotiana tomentosiformis] | |||||
| JMSF036F13 | Sequence | 689 | 005205 (6) | ref|XP_009618640.1| | 1e-68 | PREDICTED: U-box domain-containing protein 44 [Nicotiana tomentosiformis] | 748 | 007176 (2) | gb|AJD77270.1| | 4e-79 | hypothetical protein, partial [Populus monticola] |
| JMSF039O19 | Sequence | 687 | 005205 (6) | ref|XP_009618640.1| | 2e-69 | PREDICTED: U-box domain-containing protein 44 [Nicotiana tomentosiformis] | 812 | 007176 (2) | gb|AJD77270.1| | 4e-72 | hypothetical protein, partial [Populus monticola] |
This contig is upended
. : . : . : . : . : . :
JMFS136H06+ TCAGCTCTGCA
JMFS162A07+ TGTCGATAATCATTGGTATCAGCTCTGCA
____________________________________________________________
consensus TGTCGATAATCATTGGTATCAGCTCTGCA
. : . : . : . : . : . :
JMFS136H06+ TTTCGGATTACACGGGTATTAGACCTACTTTTCTGGCAGAGATGCTCAAGAGTATGCAAC
JMFS162A07+ TTTCGGATTACACGGGTATTAGACCTACTTTTCTGGCAGAGATGCTCAAGAGTATGCAAC
JMFF038P02+ TGGCAGAGATGCTCAAGAGTATGCAAC
JMSF039O19+ TGGCAGAGATGCTCAAGAGTATGCAAC
JMSF036F13+ GCAGAGATGCTCAAGAGTATGCAAC
____________________________________________________________
consensus TTTCGGATTACACGGGTATTAGACCTACTTTTCTGGCAGAGATGCTCAAGAGTATGCAAC
. : . : . : . : . : . :
JMFS136H06+ ACTCGCAGAATATCAGTCTCTGCACTTCCCAGAGAGAGCGTTCTGCGAGCCATATCGAGC
JMFS162A07+ ACTCGCAGAATATCAGTCTCTGCACTTCCCAGAGAGAGCGTTCTGCGAGCCATATCGAGC
JMFF038P02+ ACTCGCAGAATATCAGTCTCTGCACTTCCCAGAGAGAGCGTTCTGCGAGCCATATCGAGC
JMSF039O19+ ACTCGCAGAATATCAGTCTCTGCACTTCCCAGAGAGAGCGTTCTGCGAGCCATATCGAGC
JMFS155G05+ TGCACTTCCCAGAGAGAGCGTTCTGCGAGCCATATCGAGC
JMSF036F13+ ACTCGCAGAATATCAGTCTCTGCACTTCCCAGAGAGAGCGTTCTGCGAGCCATATCGAGC
____________________________________________________________
consensus ACTCGCAGAATATCAGTCTCTGCACTTCCCAGAGAGAGCGTTCTGCGAGCCATATCGAGC
. : . : . : . : . : . :
JMFS136H06+ TGAGCAGCTTCGTTACGTGCATTCCATTCTTCAATGGTGTTCCGCAAGGCTATACTTGGA
JMFS162A07+ TGAGCAGCTTCGTTACGTGCATTCCATTCTTCAATGGTGTTCCGCAAGGCTATACTTGGA
JMFF038P02+ TGAGCAGCTTCGTTACGTGCATTCCATTCTTCAATGGTGTTCCGCAAGGCTATACTTGGA
JMSF039O19+ TGAGCAGCTTCGTTACGTGCATTCCATTCTTCAATGGTGTTCCGCAAGGCTATACTTGGA
JMFS155G05+ TGAGCAGCTTCGTTACGTGCATTCCATTCTTCAATGGTGTTCCGCAAGGCTATACTTGGA
JMSF036F13+ TGAGCAGCTTCGTTACGTGCATTCCATTCTTCAATGGTGTTCCGCAAGGCTATACTTGGA
____________________________________________________________
consensus TGAGCAGCTTCGTTACGTGCATTCCATTCTTCAATGGTGTTCCGCAAGGCTATACTTGGA
. : . : . : . : . : . :
JMFS136H06+ TTCAACTCTGTGCTTCTCAATTCTCTTTGTGTTAAGGGGCAGACGGGATTTCTTCTGCTT
JMFS162A07+ TTCAACTCTGTGCTTCTCAATTCTCTTTGTGTTAAGGGGCAGACGGGATTTCTTCTGCTT
JMFF038P02+ TTCAACTCTGTGCTTCTCAATTCTCTTTGTGTTAAGGGGCAGACGGGATTTCTTCTGCTT
JMSF039O19+ TTCAACTCTGTGCTTCTCAATTCTCTTTGTGTTAAGGGGCAGACGGGATTTCTTCTGCTT
JMFS155G05+ TTCAACTCTGTGCTTCTCAATTCTCTTTGTGTTAAGGGGCAGACGGGATTTCTTCTGCTT
JMSF036F13+ TTCAACTCTGTGCTTCTCAATTCTCTTTGTGTTAAGGGGCAGACGGGATTTCTTCTGCTT
____________________________________________________________
consensus TTCAACTCTGTGCTTCTCAATTCTCTTTGTGTTAAGGGGCAGACGGGATTTCTTCTGCTT
. : . : . : . : . : . :
JMFS136H06+ GCCTTGCATTCATTAAACCATTTCTCAATTGCTTCCCTTTCAAAAGTTTGCCCACTTTCA
JMFS162A07+ GCCTTGCATTCATTAAACCATTTCTCAATTGCTTCCCTTTCAAAAGTTTGCCCACTTTCA
JMFF038P02+ GCCTTGCATTCATTAAACCATTTCTCAATTGCTTCCCTTTCAAAAGTTTGCCCACTTTCA
JMSF039O19+ GCCTTGCATTCATTAAACCATTTCTCAATTGCTTCCCTTTCAAAAGTTTGCCCACTTTCA
JMFS155G05+ GCCTTGCATTCATTAAACCATTTCTCAATTGCTTCCCTTTCAAAAGTTTGCCCACTTTCA
JMSF036F13+ GCCTTGCATTCATTAAACCATTTCTCAATTGCTTCCCTTTCAAAAGTTTGCCCACTTTCA
____________________________________________________________
consensus GCCTTGCATTCATTAAACCATTTCTCAATTGCTTCCCTTTCAAAAGTTTGCCCACTTTCA
. : . : . : . : . : . :
JMFS136H06+ ATAGTTACAGGATCACGCATTACTTGCTTTGTAAGAGGACATATAAACGCATCATATGTA
JMFS162A07+ ATAGTTACAGGATCACGCATTACTTGCTTTGTAAGAGGACATATAAACGCATCATATGTA
JMFF038P02+ ATAGTTACAGGATCACGCATTACTTGCTTTGTAAGAGGACATATAAACGCATCATATGTA
JMSF039O19+ ATAGTTACAGGATCACGCATTACTTGCTTTGTAAGAGGACATATAAACGCATCATATGTA
JMFS155G05+ ATAGTTACAGGATCACGCATTACTTGCTTTGTAAGAGGACATATAAACGCATCATATGTA
JMSF036F13+ ATAGTTACAGGATCACGCATTACTTGCTTTGTAAGAGGACATATAAACGCATCATATGTA
____________________________________________________________
consensus ATAGTTACAGGATCACGCATTACTTGCTTTGTAAGAGGACATATAAACGCATCATATGTA
. : . : . : . : . : . :
JMFS136H06+ GGTTCCAAATATAGTCTCTCAAAATGGTAGCTCTCGTCTGATGGGCTACCAATTTCAAGA
JMFS162A07+ GGTTCCAAATATAGTCTCTCAAAATGGTAGCTCTCGTCTGATGGGCTACCAATTTCAAGA
JMFF038P02+ GGTTCCAAATATAGTCTCTCAAAATGGTAGCTCTCGTCTGATGGGCTACCAATTTCAAGA
JMSF039O19+ GGTTCCAAATATAGTCTCTCAAAATGGTAGCTCTCGTCTGATGGGCTACCAATTTCAAGA
JMFS155G05+ GGTTCCAAATATAGTCTCTCAAAATGGTAGCTCTCGTCTGATGGGCTACCAATTTCAAGA
JMSF036F13+ GGTTCCAAATATAGTCTCTCAAAATGGTAGCTCTCGTCTGATGGGCTACCAATTTCAAGA
____________________________________________________________
consensus GGTTCCAAATATAGTCTCTCAAAATGGTAGCTCTCGTCTGATGGGCTACCAATTTCAAGA
. : . : . : . : . : . :
JMFS136H06+ TTGCCATCCCAGCTTTCAGCCATCTAAATAGTGTGCCCGTCAAAAGGAAGAAATGCTTTT
JMFS162A07+ TTGCCATCCCAGCTTTCAGCCATCTAAATAGTGTGCCCGTCAAAAGGAAGAAATGCTTTT
JMFF038P02+ TTGCCATCCCAGCTTTCAGCCATCTAAATAGTGTGCCCGTCAAAAGGAAGAAATGCTTTT
JMSF039O19+ TTGCCATCCCAGCTTTCAGCCATCTAAATAGTGTGCCCGTCAAAAGGAAGAAATGCTTTT
JMFS155G05+ TTGCCATCCCAGCTTTCAGCCATCTAAATAGTGTGCCCGTCAAAAGGAAGAAATGCTTTT
JMSF036F13+ TTGCCATCCCAGCTTTCAGCCATCTAAATAGTGTGCCCGTCAAAAGGAAGAAATGCTTTT
____________________________________________________________
consensus TTGCCATCCCAGCTTTCAGCCATCTAAATAGTGTGCCCGTCAAAAGGAAGAAATGCTTTT
. : . : . : . : . : . :
JMFS136H06+ CCTTGTGGGGTGAATTCTTGACGAAGCTAACTGGGGGAAGAAAAAAAATCAAAACTTCAA
JMFS162A07+ CCTTGTGGGGTGAATTCTTGACGAAGCTAACTGGGGGAAG-AAAAAAATCAAAACTTCAA
JMFF038P02+ CCTTGTGGGGTGAATTCTTGACGAAGCTAACTGGGGGAAGAAAAAAAATCAAAACTTCAA
JMSF039O19+ CCTTGTGGGGTGAATTCTTGACGAAGCTAACTGGGGGAAG-AAAAAAATCAAAACTTCAA
JMFS155G05+ CCTTGTGGGGTGAATTCTTGACGAAGCTAACTGGGGGAAGAAAAAAAATCAAAACTTCAA
JMSF036F13+ CCTTGTGGGGTGAATTCTTGACGAAGCTAACTGGGGGAAGAAAAAAAATCAAAACTTCAA
____________________________________________________________
consensus CCTTGTGGGGTGAATTCTTGACGAAGCTAACTGGGGGAAGAAAAAAAATCAAAACTTCAA
. : . : . : . : . : . :
JMFS136H06+ GCTTGCAGCGATGGAGTGCTTGAAGAAAGAA
JMFS162A07+ GCTTGCAGCGATGGAGTGCTTGAAGAAAGAAATGGTAGAGAGGAATTGCAGGAGGAGG
JMFF038P02+ GCTTGCAGCGATGGAGTGCTTGAAGAAAGAAATGGTAGAGAGGAATTGCAGGAGGAGGGT
JMSF039O19+ GCTTGCAGCGATGGAGTGCTTGAAGAAAGAAATGGTAGAGAGGAATTGCAGGAGGAGGGT
JMFS155G05+ GCTTGCAGCGATGGAGTGCTTGAAGAAAGAAATGGTAGAGAGGAATTGCAGGAGGAGGGT
JMSF036F13+ GCTTGCAGCGATGGAGTGCTTGAAGAAAGAAATGGTAGAGAGGAATTGCAGGAGGAGGGT
____________________________________________________________
consensus GCTTGCAGCGATGGAGTGCTTGAAGAAAGAAATGGTAGAGAGGAATTGCAGGAGGAGGGT
. : . : . : . : . : . :
JMFF038P02+ TGAATCTTCTTCCATGAAGCGTTTGATTTAGGGTTTGGGTCGGTCCATATGGAGGGC
JMSF039O19+ TGAATCTTCTTCCATGAAGCGTTTGATTTAGGGTTTGGGTCGGTCCATATGGAGGGCAAA
JMFS155G05+ TGAATCTTCTTCCATGAAGCGTTTGATTTAGGGTTTGGGTCGGTCCATATGGAGGGCAAA
JMSF036F13+ TGAATCTTCTTCCATGAAGCGTTTGATTTAGGGTTTGGGTCGGTCCATATGGAGGGCAAA
____________________________________________________________
consensus TGAATCTTCTTCCATGAAGCGTTTGATTTAGGGTTTGGGTCGGTCCATATGGAGGGCAAA
. : . : . : . : . : . :
JMSF039O19+ GGGGCAATATGGGAAGAAGGAAGAAGGAAGGAGGAAACGAGCTGGCAACTCCGATCAA
JMFS155G05+ GGGGCAATATGGGAAGAAGGAAGAAGGAAGGAGGAAACGA
JMSF036F13+ GGGGCAATATGGGAAGAAGGAAGAAGGAAGGAGGAAACGAGCTGGCAACTCCGATCAATC
____________________________________________________________
consensus GGGGCAATATGGGAAGAAGGAAGAAGGAAGGAGGAAACGAGCTGGCAACTCCGATCAATC