clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFS167H05 | Sequence | 613 | 005198 (5) | ref|XP_009617988.1| | 221 | PREDICTED: uncharacterized protein LOC104110244 [Nicotiana tomentosiformis] | |||||
JMSF035D11 | Sequence | 662 | 005198 (5) | ref|XP_009617988.1| | 123 | PREDICTED: uncharacterized protein LOC104110244 [Nicotiana tomentosiformis] | 768 | 005198 (5) | ref|XP_011082395.1| | 288 | PREDICTED: uncharacterized protein LOC105165174 [Sesamum indicum] |
JMSF050N10 | Sequence | 661 | 005198 (5) | ref|XP_009617988.1| | 119 | PREDICTED: uncharacterized protein LOC104110244 [Nicotiana tomentosiformis] | 783 | 005198 (5) | ref|XP_009617988.1| | 325 | PREDICTED: uncharacterized protein LOC104110244 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMSF035D11- ATACATTCAGTTCATTTGTA
rJMSF050N10- TCATTTGTA
____________________________________________________________
consensus ATACATTCAGTTCATTTGTA
. : . : . : . : . : . :
rJMSF035D11- CACCAAAGCTTGTCGCCCTTCAACTGTAGATGATACAGAAGGGCGGGCGCCGGGCAGGAA
rJMSF050N10- CACCAAAGCTTGTCGCCCTTCAACTGTAGATGATACAGAAGGGCGGGCGCCGGGCAGGAA
____________________________________________________________
consensus CACCAAAGCTTGTCGCCCTTCAACTGTAGATGATACAGAAGGGCGGGCGCCGGGCAGGAA
. : . : . : . : . : . :
rJMSF035D11- GCCAGCCCCTCCCTCGACAGGGTATTAATTACAAATTACAGTGCATCTACGACAACAAGC
rJMSF050N10- GCCAGCCCCTCCCTCGACAGGGTATTAATTACAAATTACAGTGCATCTACGACAACAAGC
____________________________________________________________
consensus GCCAGCCCCTCCCTCGACAGGGTATTAATTACAAATTACAGTGCATCTACGACAACAAGC
. : . : . : . : . : . :
rJMSF035D11- TCAACTCATCCATAGCTTGTACTACTACTCCCACTCCCGTTCCCATTCCCATTCCTAATT
rJMSF050N10- TCAACTCATCCATAGCTTGTACTACTACTCCCACTCCCGTTCCCATTCCCATTCCTAATT
____________________________________________________________
consensus TCAACTCATCCATAGCTTGTACTACTACTCCCACTCCCGTTCCCATTCCCATTCCTAATT
. : . : . : . : . : . :
rJMSF035D11- CAGTTTCATCTTCGGCTTGAATTACTTCGACCTTGGTTTTAAAGCTCTCGGCTTTGTCAC
rJMSF050N10- CAGTTTCATCTTCGGCTTGAATTACTTCGACCTTGGTTTTAAAGCTCTCGGCTTTGTCAC
____________________________________________________________
consensus CAGTTTCATCTTCGGCTTGAATTACTTCGACCTTGGTTTTAAAGCTCTCGGCTTTGTCAC
. : . : . : . : . : . :
rJMSF035D11- TTGTGTCGCCTGCAGCTATGCAGTCCTGGAATCTGAAACAACTGATGAGATGGTCATTCG
rJMSF050N10- TTGTGTCGCCTGCAGCTATGCAGTCCTGGAATCTGAAACAACTGATGAGATGGTCATTCG
____________________________________________________________
consensus TTGTGTCGCCTGCAGCTATGCAGTCCTGGAATCTGAAACAACTGATGAGATGGTCATTCG
. : . : . : . : . : . :
rJMSF035D11- AGATTCCAGCAGCTTGCATGAATGAGTATACAACGGTGGGTCCAATTCCTCGGAAACCTC
rJMSF050N10- AGATTCCAGCAGCTTGCATGAATGAGTATACAACGGTGGGTCCAATTCCTCGGAAACCTC
____________________________________________________________
consensus AGATTCCAGCAGCTTGCATGAATGAGTATACAACGGTGGGTCCAATTCCTCGGAAACCTC
. : . : . : . : . : . :
rJMSF035D11- TTCTAACTAGATCTTTGCTTATCGTTTCAGCTTTTGATGTCTTGATTGGAACCTGTCTTG
rJMSF050N10- TTCTAACTAGATCTTTGCTTATCGTTTCAGCTTTTGATGTCTTGATTGGAACCTGTCTTG
____________________________________________________________
consensus TTCTAACTAGATCTTTGCTTATCGTTTCAGCTTTTGATGTCTTGATTGGAACCTGTCTTG
. : . : . : . : . : . :
rJMSF035D11- GGTAACGGAAATTACCAACTATAGGCTTGTTGTTTACGAAACCCCATATGTACTTGTCAA
rJMSF050N10- GGTAACGGAAATTACCAACTATAGGCTTGTTGTTTACGAAACCCCATATGTACTTGTCAA
____________________________________________________________
consensus GGTAACGGAAATTACCAACTATAGGCTTGTTGTTTACGAAACCCCATATGTACTTGTCAA
. : . : . : . : . : . :
rJMSF035D11- ACGACCCAATCTCATCAACTATCCTGCATATCTGGCGTGCATTTTCAATAATTGCTCGCA
rJMSF050N10- ACGACCCAATCTCATCAACTATCCTGCATATCTGGCGTGCATTTTCAATAATTGCTCGCA
____________________________________________________________
consensus ACGACCCAATCTCATCAACTATCCTGCATATCTGGCGTGCATTTTCAATAATTGCTCGCA
. : . : . : . : . : . :
rJMSF035D11- GCTTCAACTCTGACAGGAGAGAGCTGGCAGGACTTCCTTGCATCAATACCTTCTTATCAT
rJMSF050N10- GCTTCAACTCTGACAGGAGAGAGCTGGCAGGACTTCCTTGCATCAATACCTTCTTATCAT
JMFS167H05+ CAT
____________________________________________________________
consensus GCTTCAACTCTGACAGGAGAGAGCTGGCAGGACTTCCTTGCATCAATACCTTCTTATCAT
. : . : . : . : . : . :
rJMSF035D11- TCAGTTTTGAGACAGCAACAGGATCAAAATTTTGAAACACTTCTCGGAAGGTTTGCCTTC
rJMSF050N10- TCAGTTTTGAGACAGCAACAGGATCAAAATTTTGAAACACTTCTCGGAAGGTTTGCCTTC
JMFS167H05+ TCAGTTTTGAGACAGCAACAGGATCAAAATTNTGAAACACTTCTCGGAAGGTTTGCCTTC
____________________________________________________________
consensus TCAGTTTTGAGACAGCAACAGGATCAAAATTTTGAAACACTTCTCGGAAGGTTTGCCTTC
. : . : . : . : . : . :
rJMSF035D11- TGCTGAGAATGGCTGGCCATGTAAGTTCAGCTAATGCAGTGCACAANCTAAGTAATTCGA
rJMSF050N10- TGCTGAGAATGGCTGGCCATGTAAGTTCAGCTAATGCAGTGCACAAACTAAGTAATTCGA
JMFS167H05+ TGCTGAGAATGGCTGGCCATGTAAGTTCAGCTAATGCAGTGCACAAACTAAGTAATTCGA
____________________________________________________________
consensus TGCTGAGAATGGCTGGCCATGTAAGTTCAGCTAATGCAGTGCACAAACTAAGTAATTCGA
. : . : . : . : . : . :
rJMSF035D11- AAAGCTTTCTATCATCATGGAC
rJMSF050N10- AAAGCTTTCTATCATCATGGACAGGAACTCCCC
JMFS167H05+ AAAGCTTTCTATCATCATGGACAGGAACTCCCCATTCCTCGTCATGGAAAGCAGCATATA
____________________________________________________________
consensus AAAGCTTTCTATCATCATGGACAGGAACTCCCCATTCCTCGTCATGGAAAGCAGCATATA
. : . : . : . : . : . :
JMFS167H05+ ACGGATCAGTATTAGCAGTCACCCAAGCACACCTTTTCTTCAGCACAGAGACATCATCCG
____________________________________________________________
consensus ACGGATCAGTATTAGCAGTCACCCAAGCACACCTTTTCTTCAGCACAGAGACATCATCCG
. : . : . : . : . : . :
JMFS167H05+ AACTCACAGACAAGCTTTCAACTTCACTTGCAAGTTTCTCGATGACCTTCTCCGTTTTGG
JMSF050N10+ G
JMSF035D11+ G
____________________________________________________________
consensus AACTCACAGACAAGCTTTCAACTTCACTTGCAAGTTTCTCGATGACCTTCTCCGTTTTGG
. : . : . : . : . : . :
JMFS167H05+ GGCTGCATTGCTTCCTCCTAGCCGGTGTAGAGGTCATGCTCCGTCTGATAATTCTCCCCG
JMSF050N10+ GGCTGCATTGCTTCNTCCTAGCCGGTGTAGAGGTCATGCTCCGTCTGATAATTCTCCTCG
JMSF035D11+ GGCTGCATTGCTTCCTCCTAGCCGGTGTAGAGGTCATGCTCCGTCTGATAATTCTCCTCG
____________________________________________________________
consensus GGCTGCATTGCTTCCTCCTAGCCGGTGTAGAGGTCATGCTCCGTCTGATAATTCTCCTCG
. : . : . : . : . : . :
JMFS167H05+ TGGACGCCCGGCTCTGAGAAGAGTCAGTCGACGCATCGGAGGAGCACGAGGCGTTGAGCG
JMSF050N10+ TGGACGCCCGGCTCTGAGAAGAGTCAGTCGACGCATCGGAGGAGCACGAGGCGTTGAGCG
JMSF035D11+ TGGACGCCCGGCTCTGAGAAGAGTCAGTCGACGCATCGGAGGAGCACGAGGCGTTGAGCG
____________________________________________________________
consensus TGGACGCCCGGCTCTGAGAAGAGTCAGTCGACGCATCGGAGGAGCACGAGGCGTTGAGCG
. : . : . : . : . : . :
JMFS167H05+ ACAAGTTGGACCTCATCAAAAAGGACCTCTGGTCCTGCTGCTTCCGCAGAATTGAACCCA
JMSF050N10+ ACAAGTTGGACCTCATCAAAAAGGACCTCTGGTCCTGCTGCTTCCGCAGAATTGAACCCA
JMSF035D11+ ACAAGTTGGACCTCATCAAAAAGGACCTCTGGTCCTGCTGCTTCCGCAGAATTGAACCCA
____________________________________________________________
consensus ACAAGTTGGACCTCATCAAAAAGGACCTCTGGTCCTGCTGCTTCCGCAGAATTGAACCCA
. : . : . : . : . : . :
JMFS167H05+ CACTGCCGCATTTCTTCAATGCCGATACCGGAGACCGCGATTTGGGCGGCTGATCAGCCA
JMSF050N10+ CACTGCCGCATTTCTTCAATGCCGATACCGGAGACCGCGATTTGGGCGGCTGATCAGCCA
JMSF035D11+ CACTGCCGCATTTCTTCAATGCCGATACCGGAGACCGCGATTTGGGCGGCTGATCAGCCA
____________________________________________________________
consensus CACTGCCGCATTTCTTCAATGCCGATACCGGAGACCGCGATTTGGGCGGCTGATCAGCCA
. : . : . : . : . : . :
JMFS167H05+ CCGCCTCCGACATTGCCTGGAATCTCTTGCAGTCACTCTCTCGAGGCTTCTCCACCTTGT
JMSF050N10+ CCGCCTCCGACATTGCCTGGAATCTCTTGCAGTCACTCTCTCGAGGCTTCTCCACCTTGT
JMSF035D11+ CCGCCTCCGACATTGCCTGGAATCTCTTGCAGTCACTCTCTCGAGGCTTCTCCACCTTGT
____________________________________________________________
consensus CCGCCTCCGACATTGCCTGGAATCTCTTGCAGTCACTCTCTCGAGGCTTCTCCACCTTGT
. : . : . : . : . : . :
JMFS167H05+ TACTCTTCAA
JMSF050N10+ TACTCTTCAACTTCTCAGCGGGTTTGCGCAGTTCGGCCGATCTCGCCTTATTTCCAGCCG
JMSF035D11+ TACTCTTCAACTTCTCAGCGGGTTTGCGCAGTTCGGCCGATCTCGCCTTATTTCCAGCCG
____________________________________________________________
consensus TACTCTTCAACTTCTCAGCGGGTTTGCGCAGTTCGGCCGATCTCGCCTTATTTCCAGCCG
. : . : . : . : . : . :
JMSF050N10+ GTCCGAGTACGGGTCGGATCTCCGACTCGGCATTGTCCATCGATTTCACGCGGGGGACCG
JMSF035D11+ GTCCGAGTACGGGTCGGATCTCCGACTCGGCATTGTCCATCGATTTCACGCGGGGGACCG
____________________________________________________________
consensus GTCCGAGTACGGGTCGGATCTCCGACTCGGCATTGTCCATCGATTTCACGCGGGGGACCG
. : . : . : . : . : . :
JMSF050N10+ GATATTGCGTGAATTGGACCCTCACAGTCGGATATTGGCGAAACTAGGGTTTTAGGGTGA
JMSF035D11+ GATATTGCGTGAATTGGACCCTCACAGTCGGATATTGGCGAAACTAGGGTTTTAGGGTGA
____________________________________________________________
consensus GATATTGCGTGAATTGGACCCTCACAGTCGGATATTGGCGAAACTAGGGTTTTAGGGTGA
. : . : . : . : . : . :
JMSF050N10+ GAAGAGAGGTTGAAAAAGATGAAATGGTGGTGTATCCGGTTCCCAGGGTGGGAATGCAGA
JMSF035D11+ GAAGAGAGGTTGAAAAAGATGAAATGGTGGTGTATCCGGTTCCCAGGGTGGGAATGCAGA
____________________________________________________________
consensus GAAGAGAGGTTGAAAAAGATGAAATGGTGGTGTATCCGGTTCCCAGGGTGGGAATGCAGA
. : . : . : . : . : . :
JMSF050N10+ GAAATGAAACCCTAGAGAGAGCAGAGTAGAAGGTACATTGATGACGATGAAGCCCCTGAG
JMSF035D11+ GAAATGAAACCCTAGAGAGAGCAGAGTAGAAGGTACATTGATGACGATGAAGCCCCTGAG
____________________________________________________________
consensus GAAATGAAACCCTAGAGAGAGCAGAGTAGAAGGTACATTGATGACGATGAAGCCCCTGAG
. : . : . : . : . : . :
JMSF050N10+ GGTAGTAGAAGTAGAAGTAGAAGTAGGAGTGGGTCTGAGAAAATTGAAGCTGTTCGTTCC
JMSF035D11+ GGTAGTAGAAGTAGAAGTAGAAGTAGGAGTGGGTCTGAGAAAATTGAAGCTGTTCGTTCC
____________________________________________________________
consensus GGTAGTAGAAGTAGAAGTAGAAGTAGGAGTGGGTCTGAGAAAATTGAAGCTGTTCGTTCC