Contig 005194:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF034O04Sequence706005194 (2)ref|XP_009617534.1|2e-05PREDICTED: protein SUPPRESSOR OF PHYA-105 1-like isoform X2 [Nicotiana tomentos696007170 (2)dbj|BAD94577.1|5e-12putative photomorphogenesis repressor protein [Arabidopsis thaliana]
JMSF037M08Sequence671005194 (2)ref|XP_009792667.1|3e-05PREDICTED: protein SUPPRESSOR OF PHYA-105 1-like isoform X2 [Nicotiana sylvestr689007170 (2)gb|KDO76457.1|1e-12hypothetical protein CISIN_1g0013662mg, partial [Citrus sinensis]

Alignment

This contig is upended


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JMSF037M08+                                       AGGCACCAGAGCATTCAATGTTATGCTTAATA
JMSF034O04+                         TAAATAGGCAGAAAAGGCACCAGAGCATTCAATGTTATGCTTAATA
                      ____________________________________________________________
consensus                           TAAATAGGCAGAAAAGGCACCAGAGCATTCAATGTTATGCTTAATA
 
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JMSF037M08+           GGTGGAGGTTTCATCACATCAGGGTCTGGAGCCGTTGTTGGCAATGATTCTTTGGGCATA
JMSF034O04+           GGTGGAGGTTTCATCACATCAGGGTCTGGAGCCGTTGTTGGCAATGATTCTTTGGGCATA
                      ____________________________________________________________
consensus             GGTGGAGGTTTCATCACATCAGGGTCTGGAGCCGTTGTTGGCAATGATTCTTTGGGCATA
 
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JMSF037M08+           GATGTTAACAAACCCTTGTCTGTGGACATCAGAACTTGATTACAATAACTACTACTAGAC
JMSF034O04+           GATGTTAACAAACCCTTGTCTGTGGACATCAGAACTTGATTACAATAACTACTACTAGAC
                      ____________________________________________________________
consensus             GATGTTAACAAACCCTTGTCTGTGGACATCAGAACTTGATTACAATAACTACTACTAGAC
 
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JMSF037M08+           CCACCCGCCAAATTATAAAACTGTTTCCACTGGATTTGCTGCTGATCATTCATTTGTTCA
JMSF034O04+           CCACCCGCCAAATTATAAAACTGTTTCCACTGGATTTGCTGCTGATCATTCATTTGTTCA
                      ____________________________________________________________
consensus             CCACCCGCCAAATTATAAAACTGTTTCCACTGGATTTGCTGCTGATCATTCATTTGTTCA
 
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JMSF037M08+           TGGGTGATAGAGCAGCTAACTGACTCTGGGTTGGAAATTCTGTTATTTCTCATTCTCAAC
JMSF034O04+           TGGGTGATAGAGCAGCTAACTGACTCTGGGTTGGAAATTCTGTTATTTCTCATTCTCAAC
                      ____________________________________________________________
consensus             TGGGTGATAGAGCAGCTAACTGACTCTGGGTTGGAAATTCTGTTATTTCTCATTCTCAAC
 
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JMSF037M08+           TCTTCATCTGAATTGTTATTCAACAAAAAACTTGTACAAGGGGGCGTAGGATCTGCCCGT
JMSF034O04+           TCTTCATCTGAATTGTTATTCAACAAAAAACTTGTACAAGGGGGCGTAGGATCTGCCCGT
                      ____________________________________________________________
consensus             TCTTCATCTGAATTGTTATTCAACAAAAAACTTGTACAAGGGGGCGTAGGATCTGCCCGT
 
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JMSF037M08+           GACATTCCATATGTACTCAAACTACCACCACCCGGGATCTCTTCTCCATCATAGTGGGGA
JMSF034O04+           GACATTCCATATGTACTCAAACTACCACCACCCGGGATCTCTTCTCCATCATAGTGGGGA
                      ____________________________________________________________
consensus             GACATTCCATATGTACTCAAACTACCACCACCCGGGATCTCTTCTCCATCATAGTGGGGA
 
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JMSF037M08+           AATCCCTCACTGGAAGATGCATGCACTGCTGGTGGTGGTTCAGGGAAAATATCACACTCT
JMSF034O04+           AATCCCTCACTGGAAGATGCATGCACTGCTGGTGGTGGTTCAGGGAAAATATCACACTCT
                      ____________________________________________________________
consensus             AATCCCTCACTGGAAGATGCATGCACTGCTGGTGGTGGTTCAGGGAAAATATCACACTCT
 
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JMSF037M08+           TTCCTTTTTGCTTCTGCTCTCACTGCAGCATCATTTGCAGCTTTTTGCTCCTCCAACTTC
JMSF034O04+           TTCCTTTTTGCTTCTGCTCTCACTGCAGCATCATTTGCAGCTTTTTGCTCCTCCAACTTC
                      ____________________________________________________________
consensus             TTCCTTTTTGCTTCTGCTCTCACTGCAGCATCATTTGCAGCTTTTTGCTCCTCCAACTTC
 
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JMSF037M08+           TCCATGTGGTCCCGAAATGCTCTCATTGTTTTAAGTACTCAATGCATCTTCAAGACTTCA
JMSF034O04+           TCCATGTGGTCCCGAAATGCTCTCATTGTTTTAAGTACTCAATGCATCTTCAAGACTTCA
                      ____________________________________________________________
consensus             TCCATGTGGTCCCGAAATGCTCTCATTGTTTTAAGTACTCAATGCATCTTCAAGACTTCA
 
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JMSF037M08+           C                                                           
JMSF034O04+           CCTCAAATAGAAATCCCAAAAAAGTTAAAATCTTTCCCGATACTTTACTTACTCCACTTG
                      ____________________________________________________________
consensus             CCTCAAATAGAAATCCCAAAAAAGTTAAAATCTTTCCCGATACTTTACTTACTCCACTTG
 
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JMSF034O04+           TAGAATAGCATTACACTAGCTGCGTCGGGCCTAGTTGTAGCAGCAAATATTACTCCGCTC
                      ____________________________________________________________
consensus             TAGAATAGCATTACACTAGCTGCGTCGGGCCTAGTTGTAGCAGCAAATATTACTCCGCTC